RNA–Protein interactions for RNA: ENST00000464082.1

CD46-211, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-211ENST00000464082 GPAT2Q6NUI2 795 aa10.07□□□□□ -0.8
CD46-211ENST00000464082 CABLES1Q8TDN4 633 aa10.07□□□□□ -0.8
CD46-211ENST00000464082 TSEN34Q9BSV6 310 aaKnown RBP10.07□□□□□ -0.8
CD46-211ENST00000464082 HAP1P54257 671 aaPredicted RBP10.06□□□□□ -0.8
CD46-211ENST00000464082 SVOPQ8N4V2 548 aa10.06□□□□□ -0.8
CD46-211ENST00000464082 C1QTNF2Q9BXJ5 285 aa10.06□□□□□ -0.8
CD46-211ENST00000464082 AMHR2Q16671 573 aa10.05□□□□□ -0.8
CD46-211ENST00000464082 NANOS1Q8WY41 292 aaKnown RBP10.05□□□□□ -0.8
CD46-211ENST00000464082 ZBTB3Q9H5J0 574 aa10.05□□□□□ -0.8
CD46-211ENST00000464082 TOP2AP11388 1531 aaKnown RBP10.05□□□□□ -0.8
CD46-211ENST00000464082 CUX2O14529 1486 aa10.04□□□□□ -0.8
CD46-211ENST00000464082 ERCC6Q03468 1493 aa10.04□□□□□ -0.8
CD46-211ENST00000464082 IRS1P35568 1242 aa10.04□□□□□ -0.8
CD46-211ENST00000464082 VASH1Q7L8A9 365 aaPredicted RBP10.04□□□□□ -0.8
CD46-211ENST00000464082 SH3RF1Q7Z6J0 888 aa10.04□□□□□ -0.8
CD46-211ENST00000464082 CCDC155Q8N6L0 562 aa10.04□□□□□ -0.8
CD46-211ENST00000464082 ARHGEF15O94989 841 aa10.02□□□□□ -0.81
CD46-211ENST00000464082 CBLBQ13191 982 aa10.02□□□□□ -0.81
CD46-211ENST00000464082 CSPP1Q1MSJ5 1256 aa10.02□□□□□ -0.81
CD46-211ENST00000464082 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.02□□□□□ -0.81
CD46-211ENST00000464082 MAP4K5Q9Y4K4 846 aa10.02□□□□□ -0.81
CD46-211ENST00000464082 EMILIN1Q9Y6C2 1016 aa10.02□□□□□ -0.81
CD46-211ENST00000464082 PRDM2Q13029 1718 aa10.02□□□□□ -0.81
CD46-211ENST00000464082 SLURP2P0DP57 97 aa10.01□□□□□ -0.81
CD46-211ENST00000464082 CCDC116Q8IYX3 515 aa10.01□□□□□ -0.81
CD46-211ENST00000464082 VWA5B2Q8N398 1253 aa10.01□□□□□ -0.81
CD46-211ENST00000464082 DNMT3AQ9Y6K1 912 aaPredicted RBP10.01□□□□□ -0.81
CD46-211ENST00000464082 SH3BP5LQ7L8J4 393 aa10□□□□□ -0.81
CD46-211ENST00000464082 RIC3Q7Z5B4 369 aa10□□□□□ -0.81
CD46-211ENST00000464082 TSC1Q92574 1164 aa10□□□□□ -0.81
CD46-211ENST00000464082 MAGEB6P1A0A0J9YX57 407 aa9.99□□□□□ -0.81
CD46-211ENST00000464082 SLC35F4A4IF30 521 aa9.99□□□□□ -0.81
CD46-211ENST00000464082 PRPF38BQ5VTL8 546 aaKnown RBP9.99□□□□□ -0.81
CD46-211ENST00000464082 TRMT44Q8IYL2 757 aaKnown RBP9.99□□□□□ -0.81
CD46-211ENST00000464082 CADPSQ9ULU8 1353 aa9.99□□□□□ -0.81
CD46-211ENST00000464082 SPINT1O43278 529 aa9.98□□□□□ -0.81
CD46-211ENST00000464082 BARGINQ6ZT62 677 aa9.98□□□□□ -0.81
CD46-211ENST00000464082 Q6ZVU0 165 aa9.98□□□□□ -0.81
CD46-211ENST00000464082 CDC14CA4D256 554 aa9.97□□□□□ -0.81
CD46-211ENST00000464082 ITGA6P23229 1130 aa9.97□□□□□ -0.81
CD46-211ENST00000464082 DIXDC1Q155Q3 683 aa9.97□□□□□ -0.81
CD46-211ENST00000464082 QPCTQ16769 361 aa9.97□□□□□ -0.81
CD46-211ENST00000464082 PPP1R26Q5T8A7 1209 aaPredicted RBP9.97□□□□□ -0.81
CD46-211ENST00000464082 PARP9Q8IXQ6 854 aa9.96□□□□□ -0.82
CD46-211ENST00000464082 CARD14Q9BXL6 1004 aa9.96□□□□□ -0.82
CD46-211ENST00000464082 ZMYND10O75800 440 aa9.95□□□□□ -0.82
CD46-211ENST00000464082 IGHA1P01876 353 aa9.95□□□□□ -0.82
CD46-211ENST00000464082 MARSP56192 900 aaKnown RBP9.95□□□□□ -0.82
CD46-211ENST00000464082 ARMC2Q8NEN0 867 aa9.95□□□□□ -0.82
CD46-211ENST00000464082 LIMD1Q9UGP4 676 aa9.95□□□□□ -0.82
CD46-211ENST00000464082 PDS5BQ9NTI5 1447 aa9.95□□□□□ -0.82
CD46-211ENST00000464082 CFTRP13569 1480 aa9.95□□□□□ -0.82
CD46-211ENST00000464082 CTSOP43234 321 aaPredicted RBP9.94□□□□□ -0.82
CD46-211ENST00000464082 NBPF14Q5TI25 921 aa9.94□□□□□ -0.82
CD46-211ENST00000464082 AGBL1Q96MI9 1066 aa9.94□□□□□ -0.82
CD46-211ENST00000464082 WDR62O43379 1518 aa9.93□□□□□ -0.82
CD46-211ENST00000464082 ERFEQ4G0M1 354 aa9.93□□□□□ -0.82
CD46-211ENST00000464082 LYPD4Q6UWN0 246 aa9.93□□□□□ -0.82
CD46-211ENST00000464082 SV2AQ7L0J3 742 aa9.93□□□□□ -0.82
CD46-211ENST00000464082 NUTM2BA6NNL0 878 aaPredicted RBP9.92□□□□□ -0.82
CD46-211ENST00000464082 NUTM2EB1AL46 878 aaPredicted RBP9.92□□□□□ -0.82
CD46-211ENST00000464082 NUTM2DQ5VT03 806 aaPredicted RBP9.92□□□□□ -0.82
CD46-211ENST00000464082 KANK3Q6NY19 840 aa9.92□□□□□ -0.82
CD46-211ENST00000464082 NUTM2AQ8IVF1 878 aaPredicted RBP9.92□□□□□ -0.82
CD46-211ENST00000464082 PGPEP1Q9NXJ5 209 aa9.92□□□□□ -0.82
CD46-211ENST00000464082 CCDC88BA6NC98 1476 aa9.91□□□□□ -0.82
CD46-211ENST00000464082 INSM2Q96T92 566 aaPredicted RBP9.91□□□□□ -0.82
CD46-211ENST00000464082 MRC2Q9UBG0 1479 aa9.91□□□□□ -0.82
CD46-211ENST00000464082 SENP3-EIF4A1A0A087X0R7 540 aa9.9□□□□□ -0.82
CD46-211ENST00000464082 ADAMTS2O95450 1211 aa9.9□□□□□ -0.82
CD46-211ENST00000464082 XP32Q5T750 250 aa9.9□□□□□ -0.82
CD46-211ENST00000464082 SCARF2Q96GP6 870 aaPredicted RBP9.9□□□□□ -0.82
CD46-211ENST00000464082 FANCD2Q9BXW9 1451 aa9.9□□□□□ -0.83
CD46-211ENST00000464082 LILRB3O75022 631 aa9.89□□□□□ -0.83
CD46-211ENST00000464082 FOXK2Q01167 660 aa9.89□□□□□ -0.83
CD46-211ENST00000464082 RELBQ01201 579 aa9.89□□□□□ -0.83
CD46-211ENST00000464082 RTL5Q5HYW3 569 aaPredicted RBP9.89□□□□□ -0.83
CD46-211ENST00000464082 CEP164Q9UPV0 1460 aa9.89□□□□□ -0.83
CD46-211ENST00000464082 MYSM1Q5VVJ2 828 aa9.88□□□□□ -0.83
CD46-211ENST00000464082 RNF217Q8TC41 542 aa9.87□□□□□ -0.83
CD46-211ENST00000464082 ZC3H15Q8WU90 426 aaKnown RBP9.87□□□□□ -0.83
CD46-211ENST00000464082 KCTD15Q96SI1 283 aaPredicted RBP9.87□□□□□ -0.83
CD46-211ENST00000464082 GAS6Q14393 721 aa9.86□□□□□ -0.83
CD46-211ENST00000464082 ZNF395Q9H8N7 513 aaPredicted RBP9.86□□□□□ -0.83
CD46-211ENST00000464082 POLMQ9NP87 494 aaPredicted RBP9.86□□□□□ -0.83
CD46-211ENST00000464082 CUEDC1Q9NWM3 386 aaPredicted RBP9.86□□□□□ -0.83
CD46-211ENST00000464082 URB2Q14146 1524 aaKnown RBP9.86□□□□□ -0.83
CD46-211ENST00000464082 TRIM66O15016 1216 aa9.85□□□□□ -0.83
CD46-211ENST00000464082 CELA2BP08218 269 aaPredicted RBP9.85□□□□□ -0.83
CD46-211ENST00000464082 HELBQ8NG08 1087 aaPredicted RBP9.85□□□□□ -0.83
CD46-211ENST00000464082 ITGB2P05107 769 aa9.84□□□□□ -0.83
CD46-211ENST00000464082 SRSF11Q05519 484 aaKnown RBP9.84□□□□□ -0.83
CD46-211ENST00000464082 PLA2G4EQ3MJ16 856 aa9.83□□□□□ -0.84
CD46-211ENST00000464082 GPKOWQ92917 476 aaPredicted RBP eCLIP9.83□□□□□ -0.84
CD46-211ENST00000464082 ARHGAP9Q9BRR9 750 aa9.83□□□□□ -0.84
CD46-211ENST00000464082 CNTNAP5Q8WYK1 1306 aa9.82□□□□□ -0.84
CD46-211ENST00000464082 MAP3K10Q02779 954 aa9.82□□□□□ -0.84
CD46-211ENST00000464082 TUSC1Q2TAM9 212 aa9.82□□□□□ -0.84
CD46-211ENST00000464082 INTS6LQ5JSJ4 861 aaKnown RBP9.82□□□□□ -0.84
CD46-211ENST00000464082 SLC10A4Q96EP9 437 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms