RNA–Protein interactions for RNA: ENST00000463880.1

ARF4-202, Transcript of ADP ribosylation factor 4, humanhuman

TSL 3

Gene ARF4, Length 641 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARF4-202ENST00000463880 LARP1Q6PKG0 1096 aaKnown RBP28.47■■■□□ 2.15
ARF4-202ENST00000463880 USP35Q9P2H5 1018 aa28.47■■■□□ 2.15
ARF4-202ENST00000463880 COL18A1P39060 1754 aa28.46■■■□□ 2.15
ARF4-202ENST00000463880 GLI3P10071 1580 aa28.45■■■□□ 2.15
ARF4-202ENST00000463880 LTN1O94822 1766 aa28.45■■■□□ 2.15
ARF4-202ENST00000463880 MAP3K19Q56UN5 1328 aa28.44■■■□□ 2.14
ARF4-202ENST00000463880 SPATA31A5Q5VU36 1347 aa28.44■■■□□ 2.14
ARF4-202ENST00000463880 SPATA31A7Q8IWB4 1347 aa28.44■■■□□ 2.14
ARF4-202ENST00000463880 CSB-PGBD3P0DP91 1061 aa28.44■■■□□ 2.14
ARF4-202ENST00000463880 TNNT2P45379 298 aaPredicted RBP28.44■■■□□ 2.14
ARF4-202ENST00000463880 AMPHP49418 695 aa28.44■■■□□ 2.14
ARF4-202ENST00000463880 COL5A2P05997 1499 aaPredicted RBP28.44■■■□□ 2.14
ARF4-202ENST00000463880 RGS12O14924 1447 aa28.43■■■□□ 2.14
ARF4-202ENST00000463880 RGPD5Q99666 1765 aa28.43■■■□□ 2.14
ARF4-202ENST00000463880 A0A0G2JS52 829 aa28.43■■■□□ 2.14
ARF4-202ENST00000463880 MYT1Q01538 1121 aa28.43■■■□□ 2.14
ARF4-202ENST00000463880 CNGB1Q14028 1251 aaPredicted RBP28.43■■■□□ 2.14
ARF4-202ENST00000463880 FAM98CQ17RN3 349 aaKnown RBP28.42■■■□□ 2.14
ARF4-202ENST00000463880 TOM1L2Q6ZVM7 507 aa28.41■■■□□ 2.14
ARF4-202ENST00000463880 SPATA31A1Q5TZJ5 1347 aa28.41■■■□□ 2.14
ARF4-202ENST00000463880 LTV1Q96GA3 475 aaPredicted RBP28.4■■■□□ 2.14
ARF4-202ENST00000463880 CDK12Q9NYV4 1490 aaPredicted RBP28.4■■■□□ 2.14
ARF4-202ENST00000463880 IP6K1Q92551 441 aa28.39■■■□□ 2.14
ARF4-202ENST00000463880 PER1O15534 1290 aaPredicted RBP28.38■■■□□ 2.13
ARF4-202ENST00000463880 MORC1Q86VD1 984 aa28.38■■■□□ 2.13
ARF4-202ENST00000463880 PPM1GO15355 546 aaPredicted RBP28.37■■■□□ 2.13
ARF4-202ENST00000463880 HOXC9P31274 260 aa28.37■■■□□ 2.13
ARF4-202ENST00000463880 AMER1Q5JTC6 1135 aaPredicted RBP28.37■■■□□ 2.13
ARF4-202ENST00000463880 CC2D1BQ5T0F9 858 aaKnown RBP28.37■■■□□ 2.13
ARF4-202ENST00000463880 SEPT12Q8IYM1 358 aa28.37■■■□□ 2.13
ARF4-202ENST00000463880 WDR17Q8IZU2 1322 aa28.37■■■□□ 2.13
ARF4-202ENST00000463880 NSD2O96028 1365 aa28.37■■■□□ 2.13
ARF4-202ENST00000463880 ANKRD24Q8TF21 1146 aa28.36■■■□□ 2.13
ARF4-202ENST00000463880 EMILIN1Q9Y6C2 1016 aa28.36■■■□□ 2.13
ARF4-202ENST00000463880 CRB1P82279 1406 aa28.35■■■□□ 2.13
ARF4-202ENST00000463880 ABCC6O95255 1503 aa28.34■■■□□ 2.13
ARF4-202ENST00000463880 TCP11L2Q8N4U5 519 aa28.34■■■□□ 2.13
ARF4-202ENST00000463880 ANKRD26Q9UPS8 1709 aa28.34■■■□□ 2.13
ARF4-202ENST00000463880 ERBB3P21860 1342 aa28.33■■■□□ 2.13
ARF4-202ENST00000463880 NLRP2Q9NX02 1062 aa28.32■■■□□ 2.12
ARF4-202ENST00000463880 ONECUT3O60422 494 aaPredicted RBP28.31■■■□□ 2.12
ARF4-202ENST00000463880 BLMP54132 1417 aaPredicted RBP28.31■■■□□ 2.12
ARF4-202ENST00000463880 SOCS7O14512 581 aa28.3■■■□□ 2.12
ARF4-202ENST00000463880 HSP90AB2PQ58FF8 381 aa28.3■■■□□ 2.12
ARF4-202ENST00000463880 RTL1A6NKG5 1358 aa28.29■■■□□ 2.12
ARF4-202ENST00000463880 POLKQ9UBT6 870 aa28.29■■■□□ 2.12
ARF4-202ENST00000463880 MAP2P11137 1827 aaKnown RBP28.28■■■□□ 2.12
ARF4-202ENST00000463880 FLT4P35916 1363 aa28.27■■■□□ 2.12
ARF4-202ENST00000463880 PEAK1Q9H792 1746 aa28.27■■■□□ 2.12
ARF4-202ENST00000463880 BARGINQ6ZT62 677 aa28.27■■■□□ 2.12
ARF4-202ENST00000463880 CARD10Q9BWT7 1032 aa28.27■■■□□ 2.12
ARF4-202ENST00000463880 THRAP3Q9Y2W1 955 aaKnown RBP28.27■■■□□ 2.12
ARF4-202ENST00000463880 DDX10Q13206 875 aaKnown RBP28.26■■■□□ 2.11
ARF4-202ENST00000463880 BRWD3Q6RI45 1802 aa28.25■■■□□ 2.11
ARF4-202ENST00000463880 KRT27Q7Z3Y8 459 aa28.24■■■□□ 2.11
ARF4-202ENST00000463880 INSRP06213 1382 aa28.23■■■□□ 2.11
ARF4-202ENST00000463880 KIF24Q5T7B8 1368 aa28.22■■■□□ 2.11
ARF4-202ENST00000463880 THSD7AQ9UPZ6 1657 aa28.21■■■□□ 2.11
ARF4-202ENST00000463880 SMG6Q86US8 1419 aaKnown RBP28.2■■■□□ 2.11
ARF4-202ENST00000463880 FAM182BQ5T319 152 aa28.2■■■□□ 2.1
ARF4-202ENST00000463880 USHBP1Q8N6Y0 703 aa28.19■■■□□ 2.1
ARF4-202ENST00000463880 NPC1L1Q9UHC9 1359 aa28.19■■■□□ 2.1
ARF4-202ENST00000463880 NBPF6Q5VWK0 638 aa28.18■■■□□ 2.1
ARF4-202ENST00000463880 NBPF4Q96M43 638 aa28.18■■■□□ 2.1
ARF4-202ENST00000463880 RGPD2P0DJD1 1756 aa28.17■■■□□ 2.1
ARF4-202ENST00000463880 PDE3BQ13370 1112 aa28.17■■■□□ 2.1
ARF4-202ENST00000463880 DDB1Q16531 1140 aa28.15■■■□□ 2.1
ARF4-202ENST00000463880 CDCA7Q9BWT1 371 aaPredicted RBP28.15■■■□□ 2.1
ARF4-202ENST00000463880 ZNF316A6NFI3 1004 aaPredicted RBP28.14■■■□□ 2.1
ARF4-202ENST00000463880 IL2RBP14784 551 aa28.14■■■□□ 2.1
ARF4-202ENST00000463880 MTHFSP49914 203 aa28.13■■■□□ 2.09
ARF4-202ENST00000463880 UPF1Q92900 1129 aaKnown RBP eCLIP28.13■■■□□ 2.09
ARF4-202ENST00000463880 FAM208AQ9UK61 1670 aaKnown RBP28.13■■■□□ 2.09
ARF4-202ENST00000463880 EIF4A2Q14240 407 aaKnown RBP28.12■■■□□ 2.09
ARF4-202ENST00000463880 WNK3Q9BYP7 1800 aa28.11■■■□□ 2.09
ARF4-202ENST00000463880 DISP2A7MBM2 1401 aa28.11■■■□□ 2.09
ARF4-202ENST00000463880 PARP4Q9UKK3 1724 aaKnown RBP28.1■■■□□ 2.09
ARF4-202ENST00000463880 EXOC5O00471 708 aa28.1■■■□□ 2.09
ARF4-202ENST00000463880 EYA1Q99502 592 aa28.08■■■□□ 2.09
ARF4-202ENST00000463880 LRRC37A3O60309 1634 aa28.07■■■□□ 2.08
ARF4-202ENST00000463880 RAPGEF4Q8WZA2 1011 aa28.05■■■□□ 2.08
ARF4-202ENST00000463880 PPP2R1AP30153 589 aa28.03■■■□□ 2.08
ARF4-202ENST00000463880 FAM196AQ6ZSG2 479 aa28.03■■■□□ 2.08
ARF4-202ENST00000463880 MARCH10Q8NA82 808 aaPredicted RBP28.03■■■□□ 2.08
ARF4-202ENST00000463880 MEGF6O75095 1541 aa28.02■■■□□ 2.08
ARF4-202ENST00000463880 TATP17735 454 aaPredicted RBP28.02■■■□□ 2.08
ARF4-202ENST00000463880 TNS2Q63HR2 1409 aa28.01■■■□□ 2.08
ARF4-202ENST00000463880 DDX54Q8TDD1 881 aaKnown RBP28■■■□□ 2.07
ARF4-202ENST00000463880 IL13P35225 146 aa27.99■■■□□ 2.07
ARF4-202ENST00000463880 DIAPH1O60610 1272 aaKnown RBP27.98■■■□□ 2.07
ARF4-202ENST00000463880 ZCRB1Q8TBF4 217 aaKnown RBP27.98■■■□□ 2.07
ARF4-202ENST00000463880 TRIM37O94972 964 aa27.97■■■□□ 2.07
ARF4-202ENST00000463880 SF3B2Q13435 895 aaKnown RBP27.97■■■□□ 2.07
ARF4-202ENST00000463880 EP400Q96L91 3159 aa27.97■■■□□ 2.07
ARF4-202ENST00000463880 OVOS2A0A0G2JMS6 1433 aa27.97■■■□□ 2.07
ARF4-202ENST00000463880 PARD3Q8TEW0 1356 aa27.97■■■□□ 2.07
ARF4-202ENST00000463880 IGSF1Q8N6C5 1336 aa27.96■■■□□ 2.07
ARF4-202ENST00000463880 AEBP1Q8IUX7 1158 aa27.95■■■□□ 2.06
ARF4-202ENST00000463880 CFAP53Q96M91 514 aa27.95■■■□□ 2.06
ARF4-202ENST00000463880 NCAPD2Q15021 1401 aa27.93■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms