RNA–Protein interactions for RNA: ENST00000463511.1

SSNA1-203, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 2

Gene SSNA1, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-203ENST00000463511 TOM1L2Q6ZVM7 507 aa33.24■■■□□ 2.91
SSNA1-203ENST00000463511 MON2Q7Z3U7 1717 aa33.24■■■□□ 2.91
SSNA1-203ENST00000463511 NEUROD1Q13562 356 aa33.21■■■□□ 2.91
SSNA1-203ENST00000463511 NBPF14Q5TI25 921 aa33.21■■■□□ 2.91
SSNA1-203ENST00000463511 AXIN2Q9Y2T1 843 aa33.21■■■□□ 2.91
SSNA1-203ENST00000463511 TTC21BQ7Z4L5 1316 aa33.21■■■□□ 2.91
SSNA1-203ENST00000463511 WDR17Q8IZU2 1322 aa33.2■■■□□ 2.91
SSNA1-203ENST00000463511 C11orf95C9JLR9 678 aaPredicted RBP33.19■■■□□ 2.9
SSNA1-203ENST00000463511 DDB1Q16531 1140 aa33.19■■■□□ 2.9
SSNA1-203ENST00000463511 NFAT5O94916 1531 aa33.18■■■□□ 2.9
SSNA1-203ENST00000463511 SOX12O15370 315 aa33.18■■■□□ 2.9
SSNA1-203ENST00000463511 ZNF692Q9BU19 519 aaPredicted RBP33.18■■■□□ 2.9
SSNA1-203ENST00000463511 ARHGEF25Q86VW2 580 aa33.16■■■□□ 2.9
SSNA1-203ENST00000463511 KCNH5Q8NCM2 988 aa33.15■■■□□ 2.9
SSNA1-203ENST00000463511 TTC21AQ8NDW8 1320 aa33.15■■■□□ 2.9
SSNA1-203ENST00000463511 KTN1Q86UP2 1357 aaKnown RBP33.13■■■□□ 2.89
SSNA1-203ENST00000463511 LTN1O94822 1766 aa33.13■■■□□ 2.89
SSNA1-203ENST00000463511 USP54Q70EL1 1684 aa33.13■■■□□ 2.89
SSNA1-203ENST00000463511 ABCC6O95255 1503 aa33.1■■■□□ 2.89
SSNA1-203ENST00000463511 CASZ1Q86V15 1759 aa33.09■■■□□ 2.89
SSNA1-203ENST00000463511 CSB-PGBD3P0DP91 1061 aa33.09■■■□□ 2.89
SSNA1-203ENST00000463511 PTF1AQ7RTS3 328 aa33.09■■■□□ 2.89
SSNA1-203ENST00000463511 MARCH10Q8NA82 808 aaPredicted RBP33.08■■■□□ 2.89
SSNA1-203ENST00000463511 CDCA7Q9BWT1 371 aaPredicted RBP33.08■■■□□ 2.89
SSNA1-203ENST00000463511 PLSCR1O15162 318 aa33.07■■■□□ 2.88
SSNA1-203ENST00000463511 BCL11BQ9C0K0 894 aaPredicted RBP33.07■■■□□ 2.88
SSNA1-203ENST00000463511 CARD10Q9BWT7 1032 aa33.06■■■□□ 2.88
SSNA1-203ENST00000463511 SBNO2Q9Y2G9 1366 aa33.05■■■□□ 2.88
SSNA1-203ENST00000463511 BCL9O00512 1426 aa33.04■■■□□ 2.88
SSNA1-203ENST00000463511 SPON1Q9HCB6 807 aa33.04■■■□□ 2.88
SSNA1-203ENST00000463511 ANO8Q9HCE9 1232 aaPredicted RBP33.03■■■□□ 2.88
SSNA1-203ENST00000463511 CD163L1Q9NR16 1453 aa33.03■■■□□ 2.88
SSNA1-203ENST00000463511 SUGP2Q8IX01 1082 aaKnown RBP eCLIP33.02■■■□□ 2.88
SSNA1-203ENST00000463511 CCDC7Q96M83 1385 aa33.01■■■□□ 2.88
SSNA1-203ENST00000463511 KCNQ2O43526 872 aa33.01■■■□□ 2.87
SSNA1-203ENST00000463511 PPP1R1BQ9UD71 204 aaPredicted RBP33.01■■■□□ 2.87
SSNA1-203ENST00000463511 TNS2Q63HR2 1409 aa33■■■□□ 2.87
SSNA1-203ENST00000463511 NHSQ6T4R5 1651 aa33■■■□□ 2.87
SSNA1-203ENST00000463511 USP31Q70CQ4 1352 aa32.98■■■□□ 2.87
SSNA1-203ENST00000463511 CARD11Q9BXL7 1154 aa32.98■■■□□ 2.87
SSNA1-203ENST00000463511 EXOC5O00471 708 aa32.96■■■□□ 2.87
SSNA1-203ENST00000463511 NME9Q86XW9 330 aa32.96■■■□□ 2.87
SSNA1-203ENST00000463511 PROM2Q8N271 834 aa32.96■■■□□ 2.87
SSNA1-203ENST00000463511 KAT6BQ8WYB5 2073 aa32.94■■■□□ 2.86
SSNA1-203ENST00000463511 TMC1Q8TDI8 760 aa32.94■■■□□ 2.86
SSNA1-203ENST00000463511 ERBB3P21860 1342 aa32.93■■■□□ 2.86
SSNA1-203ENST00000463511 NINLQ9Y2I6 1382 aa32.93■■■□□ 2.86
SSNA1-203ENST00000463511 MYOM1P52179 1685 aa32.92■■■□□ 2.86
SSNA1-203ENST00000463511 PDGFDQ9GZP0 370 aaPredicted RBP32.91■■■□□ 2.86
SSNA1-203ENST00000463511 BTAF1O14981 1849 aa32.91■■■□□ 2.86
SSNA1-203ENST00000463511 EDC4Q6P2E9 1401 aaKnown RBP32.9■■■□□ 2.86
SSNA1-203ENST00000463511 TXNRD1Q16881 649 aa32.89■■■□□ 2.86
SSNA1-203ENST00000463511 HDGFL2Q7Z4V5 671 aaPredicted RBP32.89■■■□□ 2.86
SSNA1-203ENST00000463511 SLC12A5Q9H2X9 1139 aa32.89■■■□□ 2.86
SSNA1-203ENST00000463511 NLRP2Q9NX02 1062 aa32.89■■■□□ 2.86
SSNA1-203ENST00000463511 A0A1W2PP64 1363 aa32.87■■■□□ 2.85
SSNA1-203ENST00000463511 TONSLQ96HA7 1378 aa32.86■■■□□ 2.85
SSNA1-203ENST00000463511 FAM208AQ9UK61 1670 aaKnown RBP32.86■■■□□ 2.85
SSNA1-203ENST00000463511 ZBTB7AO95365 584 aa32.85■■■□□ 2.85
SSNA1-203ENST00000463511 YY1P25490 414 aa32.84■■■□□ 2.85
SSNA1-203ENST00000463511 ACSBG1Q96GR2 724 aa32.84■■■□□ 2.85
SSNA1-203ENST00000463511 STK32BQ9NY57 414 aa32.84■■■□□ 2.85
SSNA1-203ENST00000463511 ANKRD24Q8TF21 1146 aa32.83■■■□□ 2.85
SSNA1-203ENST00000463511 PAPPAQ13219 1627 aa32.82■■■□□ 2.84
SSNA1-203ENST00000463511 IL2RBP14784 551 aa32.82■■■□□ 2.84
SSNA1-203ENST00000463511 TERF2IPQ9NYB0 399 aa32.82■■■□□ 2.84
SSNA1-203ENST00000463511 SLC15A2Q16348 729 aa32.79■■■□□ 2.84
SSNA1-203ENST00000463511 RGPD2P0DJD1 1756 aa32.78■■■□□ 2.84
SSNA1-203ENST00000463511 DCAF8L1A6NGE4 600 aa32.78■■■□□ 2.84
SSNA1-203ENST00000463511 ATF5Q9Y2D1 282 aaPredicted RBP32.78■■■□□ 2.84
SSNA1-203ENST00000463511 PTGER2P43116 358 aa32.77■■■□□ 2.84
SSNA1-203ENST00000463511 PUS7Q96PZ0 661 aaKnown RBP32.74■■■□□ 2.83
SSNA1-203ENST00000463511 DOT1LQ8TEK3 1739 aa32.71■■■□□ 2.83
SSNA1-203ENST00000463511 SHANK3Q9BYB0 1731 aa32.71■■■□□ 2.83
SSNA1-203ENST00000463511 IP6K1Q92551 441 aa32.7■■■□□ 2.83
SSNA1-203ENST00000463511 LTV1Q96GA3 475 aaPredicted RBP32.7■■■□□ 2.83
SSNA1-203ENST00000463511 TESK2Q96S53 571 aa32.7■■■□□ 2.83
SSNA1-203ENST00000463511 MTFR1LQ9H019 292 aa32.69■■■□□ 2.82
SSNA1-203ENST00000463511 QSER1Q2KHR3 1735 aa32.68■■■□□ 2.82
SSNA1-203ENST00000463511 ST20-MTHFSA0A0A6YYL1 179 aa32.67■■■□□ 2.82
SSNA1-203ENST00000463511 TUBGCP6Q96RT7 1819 aa32.66■■■□□ 2.82
SSNA1-203ENST00000463511 COG3Q96JB2 828 aa32.65■■■□□ 2.82
SSNA1-203ENST00000463511 UTRNP46939 3433 aa32.64■■■□□ 2.82
SSNA1-203ENST00000463511 MAP3K19Q56UN5 1328 aa32.64■■■□□ 2.82
SSNA1-203ENST00000463511 DDX54Q8TDD1 881 aaKnown RBP32.64■■■□□ 2.82
SSNA1-203ENST00000463511 FHDC1Q9C0D6 1143 aaPredicted RBP32.64■■■□□ 2.82
SSNA1-203ENST00000463511 ZNF827Q17R98 1081 aa32.63■■■□□ 2.81
SSNA1-203ENST00000463511 SGIP1Q9BQI5 828 aa32.63■■■□□ 2.81
SSNA1-203ENST00000463511 CHD4Q14839 1912 aa32.63■■■□□ 2.81
SSNA1-203ENST00000463511 LRRC4BQ9NT99 713 aa32.62■■■□□ 2.81
SSNA1-203ENST00000463511 LY75O60449 1722 aa32.62■■■□□ 2.81
SSNA1-203ENST00000463511 FBLN1P23142 703 aa32.61■■■□□ 2.81
SSNA1-203ENST00000463511 KIF20BQ96Q89 1820 aa32.61■■■□□ 2.81
SSNA1-203ENST00000463511 HOXC9P31274 260 aa32.6■■■□□ 2.81
SSNA1-203ENST00000463511 SYT17Q9BSW7 474 aa32.6■■■□□ 2.81
SSNA1-203ENST00000463511 ANKRD36BQ8N2N9 1353 aa32.59■■■□□ 2.81
SSNA1-203ENST00000463511 AMPHP49418 695 aa32.59■■■□□ 2.81
SSNA1-203ENST00000463511 MEGF6O75095 1541 aa32.57■■■□□ 2.8
SSNA1-203ENST00000463511 COL24A1Q17RW2 1714 aa32.55■■■□□ 2.8
SSNA1-203ENST00000463511 SYTL4Q96C24 671 aaPredicted RBP32.54■■■□□ 2.8
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms