RNA–Protein interactions for RNA: ENST00000463455.1

RTCB-202, Transcript of RNA 2',3'-cyclic phosphate and 5'-OH ligase, humanhuman

TSL 2

Gene RTCB, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCB-202ENST00000463455 CD163L1Q9NR16 1453 aa16.79■□□□□ 0.28
RTCB-202ENST00000463455 CRB1P82279 1406 aa16.79■□□□□ 0.28
RTCB-202ENST00000463455 USP31Q70CQ4 1352 aa16.78■□□□□ 0.28
RTCB-202ENST00000463455 HDGFL2Q7Z4V5 671 aaPredicted RBP16.78■□□□□ 0.28
RTCB-202ENST00000463455 TCP11L2Q8N4U5 519 aa16.78■□□□□ 0.28
RTCB-202ENST00000463455 TESK2Q96S53 571 aa16.78■□□□□ 0.28
RTCB-202ENST00000463455 EDC4Q6P2E9 1401 aaKnown RBP16.78■□□□□ 0.28
RTCB-202ENST00000463455 TERF2IPQ9NYB0 399 aa16.77■□□□□ 0.28
RTCB-202ENST00000463455 COL18A1P39060 1754 aa16.77■□□□□ 0.27
RTCB-202ENST00000463455 RGPD1P0DJD0 1748 aa16.76■□□□□ 0.27
RTCB-202ENST00000463455 ST20-MTHFSA0A0A6YYL1 179 aa16.76■□□□□ 0.27
RTCB-202ENST00000463455 LARP1Q6PKG0 1096 aaKnown RBP16.76■□□□□ 0.27
RTCB-202ENST00000463455 ARHGEF25Q86VW2 580 aa16.76■□□□□ 0.27
RTCB-202ENST00000463455 SPINK5Q9NQ38 1064 aaPredicted RBP16.76■□□□□ 0.27
RTCB-202ENST00000463455 ZRANB1Q9UGI0 708 aa16.76■□□□□ 0.27
RTCB-202ENST00000463455 NFAT5O94916 1531 aa16.75■□□□□ 0.27
RTCB-202ENST00000463455 C11orf95C9JLR9 678 aaPredicted RBP16.75■□□□□ 0.27
RTCB-202ENST00000463455 DISP2A7MBM2 1401 aa16.75■□□□□ 0.27
RTCB-202ENST00000463455 PARP4Q9UKK3 1724 aaKnown RBP16.74■□□□□ 0.27
RTCB-202ENST00000463455 BAG6P46379 1132 aa16.74■□□□□ 0.27
RTCB-202ENST00000463455 FAM196AQ6ZSG2 479 aa16.74■□□□□ 0.27
RTCB-202ENST00000463455 TMC1Q8TDI8 760 aa16.74■□□□□ 0.27
RTCB-202ENST00000463455 USP47Q96K76 1375 aa16.74■□□□□ 0.27
RTCB-202ENST00000463455 SLC12A5Q9H2X9 1139 aa16.73■□□□□ 0.27
RTCB-202ENST00000463455 A0A1W2PP64 1363 aa16.73■□□□□ 0.27
RTCB-202ENST00000463455 WDR17Q8IZU2 1322 aa16.72■□□□□ 0.27
RTCB-202ENST00000463455 C1QBPQ07021 282 aaKnown RBP16.72■□□□□ 0.27
RTCB-202ENST00000463455 USP35Q9P2H5 1018 aa16.72■□□□□ 0.27
RTCB-202ENST00000463455 PDE3BQ13370 1112 aa16.71■□□□□ 0.27
RTCB-202ENST00000463455 CDCA7Q9BWT1 371 aaPredicted RBP16.71■□□□□ 0.27
RTCB-202ENST00000463455 TMF1P82094 1093 aa16.7■□□□□ 0.26
RTCB-202ENST00000463455 CDCA8Q53HL2 280 aa16.7■□□□□ 0.26
RTCB-202ENST00000463455 DEFB132Q7Z7B7 95 aa16.7■□□□□ 0.26
RTCB-202ENST00000463455 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.7■□□□□ 0.26
RTCB-202ENST00000463455 TNS1Q9HBL0 1735 aaKnown RBP16.7■□□□□ 0.26
RTCB-202ENST00000463455 OVOS2A0A0J9YW53 1432 aa16.7■□□□□ 0.26
RTCB-202ENST00000463455 OVOS2Q6IE36 1432 aa16.7■□□□□ 0.26
RTCB-202ENST00000463455 ANKRD36BQ8N2N9 1353 aa16.69■□□□□ 0.26
RTCB-202ENST00000463455 TOM1L2Q6ZVM7 507 aa16.69■□□□□ 0.26
RTCB-202ENST00000463455 AXIN2Q9Y2T1 843 aa16.69■□□□□ 0.26
RTCB-202ENST00000463455 PARD3Q8TEW0 1356 aa16.68■□□□□ 0.26
RTCB-202ENST00000463455 ZBTB7CA1YPR0 619 aa16.68■□□□□ 0.26
RTCB-202ENST00000463455 NME9Q86XW9 330 aa16.68■□□□□ 0.26
RTCB-202ENST00000463455 CARD10Q9BWT7 1032 aa16.68■□□□□ 0.26
RTCB-202ENST00000463455 ZNF219Q9P2Y4 722 aaPredicted RBP16.68■□□□□ 0.26
RTCB-202ENST00000463455 CCDC7Q96M83 1385 aa16.67■□□□□ 0.26
RTCB-202ENST00000463455 WNK3Q9BYP7 1800 aa16.67■□□□□ 0.26
RTCB-202ENST00000463455 OVOS2A0A0G2JMS6 1433 aa16.66■□□□□ 0.26
RTCB-202ENST00000463455 FAM182BQ5T319 152 aa16.66■□□□□ 0.26
RTCB-202ENST00000463455 LRRC37A3O60309 1634 aa16.66■□□□□ 0.26
RTCB-202ENST00000463455 BCL9O00512 1426 aa16.65■□□□□ 0.26
RTCB-202ENST00000463455 RGPD5Q99666 1765 aa16.65■□□□□ 0.26
RTCB-202ENST00000463455 PCGF6Q9BYE7 350 aa16.65■□□□□ 0.26
RTCB-202ENST00000463455 LTN1O94822 1766 aa16.64■□□□□ 0.25
RTCB-202ENST00000463455 SOX12O15370 315 aa16.64■□□□□ 0.25
RTCB-202ENST00000463455 CSB-PGBD3P0DP91 1061 aa16.64■□□□□ 0.25
RTCB-202ENST00000463455 PEAK1Q9H792 1746 aa16.64■□□□□ 0.25
RTCB-202ENST00000463455 ERBB3P21860 1342 aa16.64■□□□□ 0.25
RTCB-202ENST00000463455 DDB1Q16531 1140 aa16.63■□□□□ 0.25
RTCB-202ENST00000463455 CAPN15O75808 1086 aa16.62■□□□□ 0.25
RTCB-202ENST00000463455 TRIM37O94972 964 aa16.62■□□□□ 0.25
RTCB-202ENST00000463455 EN1Q05925 392 aaPredicted RBP16.62■□□□□ 0.25
RTCB-202ENST00000463455 COG3Q96JB2 828 aa16.62■□□□□ 0.25
RTCB-202ENST00000463455 CAMKK2Q96RR4 588 aa16.61■□□□□ 0.25
RTCB-202ENST00000463455 FAM208AQ9UK61 1670 aaKnown RBP16.6■□□□□ 0.25
RTCB-202ENST00000463455 RGPD3A6NKT7 1758 aaPredicted RBP16.59■□□□□ 0.25
RTCB-202ENST00000463455 RGPD4Q7Z3J3 1758 aa16.59■□□□□ 0.25
RTCB-202ENST00000463455 APBA3O96018 575 aa16.59■□□□□ 0.25
RTCB-202ENST00000463455 IP6K1Q92551 441 aa16.59■□□□□ 0.25
RTCB-202ENST00000463455 TNS2Q63HR2 1409 aa16.59■□□□□ 0.25
RTCB-202ENST00000463455 RTL1A6NKG5 1358 aa16.58■□□□□ 0.24
RTCB-202ENST00000463455 RREB1Q92766 1687 aa16.58■□□□□ 0.24
RTCB-202ENST00000463455 SBF2Q86WG5 1849 aa16.57■□□□□ 0.24
RTCB-202ENST00000463455 EXOC5O00471 708 aa16.57■□□□□ 0.24
RTCB-202ENST00000463455 EZH2Q15910 746 aaKnown RBP16.57■□□□□ 0.24
RTCB-202ENST00000463455 ANKRD24Q8TF21 1146 aa16.57■□□□□ 0.24
RTCB-202ENST00000463455 MYOM1P52179 1685 aa16.56■□□□□ 0.24
RTCB-202ENST00000463455 LRP5O75197 1615 aa16.56■□□□□ 0.24
RTCB-202ENST00000463455 CCER1Q8TC90 406 aaPredicted RBP16.56■□□□□ 0.24
RTCB-202ENST00000463455 KIF24Q5T7B8 1368 aa16.55■□□□□ 0.24
RTCB-202ENST00000463455 FYB1O15117 783 aa16.55■□□□□ 0.24
RTCB-202ENST00000463455 PLSCR1O15162 318 aa16.55■□□□□ 0.24
RTCB-202ENST00000463455 IL2RBP14784 551 aa16.55■□□□□ 0.24
RTCB-202ENST00000463455 MARCH10Q8NA82 808 aaPredicted RBP16.55■□□□□ 0.24
RTCB-202ENST00000463455 BCL11BQ9C0K0 894 aaPredicted RBP16.55■□□□□ 0.24
RTCB-202ENST00000463455 NLRP2Q9NX02 1062 aa16.55■□□□□ 0.24
RTCB-202ENST00000463455 SRCAPQ6ZRS2 3230 aa16.54■□□□□ 0.24
RTCB-202ENST00000463455 MAP3K19Q56UN5 1328 aa16.54■□□□□ 0.24
RTCB-202ENST00000463455 KIF20BQ96Q89 1820 aa16.54■□□□□ 0.24
RTCB-202ENST00000463455 NUP188Q5SRE5 1749 aa16.53■□□□□ 0.24
RTCB-202ENST00000463455 HOXC9P31274 260 aa16.52■□□□□ 0.24
RTCB-202ENST00000463455 AMPHP49418 695 aa16.52■□□□□ 0.24
RTCB-202ENST00000463455 EIF4G2P78344 907 aaKnown RBP eCLIP16.52■□□□□ 0.24
RTCB-202ENST00000463455 NBPF14Q5TI25 921 aa16.51■□□□□ 0.23
RTCB-202ENST00000463455 GGNBP2Q9H3C7 697 aa16.5■□□□□ 0.23
RTCB-202ENST00000463455 NSD3Q9BZ95 1437 aa16.5■□□□□ 0.23
RTCB-202ENST00000463455 PSDA5PKW4 1024 aaPredicted RBP16.49■□□□□ 0.23
RTCB-202ENST00000463455 SMG6Q86US8 1419 aaKnown RBP16.49■□□□□ 0.23
RTCB-202ENST00000463455 NHSQ6T4R5 1651 aa16.49■□□□□ 0.23
RTCB-202ENST00000463455 R3HDM1Q15032 1099 aaKnown RBP16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms