RNA–Protein interactions for RNA: ENST00000463020.1

SND1-203, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 793 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-203ENST00000463020 YY1P25490 414 aa22.73■■□□□ 1.23
SND1-203ENST00000463020 TOM1L2Q6ZVM7 507 aa22.73■■□□□ 1.23
SND1-203ENST00000463020 SPON1Q9HCB6 807 aa22.73■■□□□ 1.23
SND1-203ENST00000463020 BRD4O60885 1362 aaPredicted RBP22.73■■□□□ 1.23
SND1-203ENST00000463020 DDB1Q16531 1140 aa22.72■■□□□ 1.23
SND1-203ENST00000463020 RGPD5Q99666 1765 aa22.71■■□□□ 1.23
SND1-203ENST00000463020 WDR17Q8IZU2 1322 aa22.71■■□□□ 1.23
SND1-203ENST00000463020 PLSCR1O15162 318 aa22.7■■□□□ 1.22
SND1-203ENST00000463020 SOX12O15370 315 aa22.7■■□□□ 1.22
SND1-203ENST00000463020 ARHGEF25Q86VW2 580 aa22.69■■□□□ 1.22
SND1-203ENST00000463020 L3MBTL2Q969R5 705 aa22.69■■□□□ 1.22
SND1-203ENST00000463020 BCL11BQ9C0K0 894 aaPredicted RBP22.69■■□□□ 1.22
SND1-203ENST00000463020 PPP1R1BQ9UD71 204 aaPredicted RBP22.69■■□□□ 1.22
SND1-203ENST00000463020 NFAT5O94916 1531 aa22.68■■□□□ 1.22
SND1-203ENST00000463020 TRPM1Q7Z4N2 1603 aa22.68■■□□□ 1.22
SND1-203ENST00000463020 NINLQ9Y2I6 1382 aa22.67■■□□□ 1.22
SND1-203ENST00000463020 TTC21BQ7Z4L5 1316 aa22.67■■□□□ 1.22
SND1-203ENST00000463020 AKAP12Q02952 1782 aa22.67■■□□□ 1.22
SND1-203ENST00000463020 MYOM1P52179 1685 aa22.67■■□□□ 1.22
SND1-203ENST00000463020 ZBTB7AO95365 584 aa22.65■■□□□ 1.22
SND1-203ENST00000463020 BCL9O00512 1426 aa22.65■■□□□ 1.22
SND1-203ENST00000463020 PTGER2P43116 358 aa22.64■■□□□ 1.21
SND1-203ENST00000463020 EVC2Q86UK5 1308 aa22.63■■□□□ 1.21
SND1-203ENST00000463020 SIN3AQ96ST3 1273 aa22.63■■□□□ 1.21
SND1-203ENST00000463020 C11orf95C9JLR9 678 aaPredicted RBP22.62■■□□□ 1.21
SND1-203ENST00000463020 CARD10Q9BWT7 1032 aa22.62■■□□□ 1.21
SND1-203ENST00000463020 TXNRD1Q16881 649 aa22.6■■□□□ 1.21
SND1-203ENST00000463020 ATF5Q9Y2D1 282 aaPredicted RBP22.6■■□□□ 1.21
SND1-203ENST00000463020 CSB-PGBD3P0DP91 1061 aa22.59■■□□□ 1.21
SND1-203ENST00000463020 TNS2Q63HR2 1409 aa22.58■■□□□ 1.21
SND1-203ENST00000463020 KCNH5Q8NCM2 988 aa22.57■■□□□ 1.2
SND1-203ENST00000463020 CDCA7Q9BWT1 371 aaPredicted RBP22.57■■□□□ 1.2
SND1-203ENST00000463020 ROCK2O75116 1388 aaKnown RBP22.57■■□□□ 1.2
SND1-203ENST00000463020 CD163L1Q9NR16 1453 aa22.57■■□□□ 1.2
SND1-203ENST00000463020 MON2Q7Z3U7 1717 aa22.57■■□□□ 1.2
SND1-203ENST00000463020 KTN1Q86UP2 1357 aaKnown RBP22.56■■□□□ 1.2
SND1-203ENST00000463020 TTC21AQ8NDW8 1320 aa22.56■■□□□ 1.2
SND1-203ENST00000463020 NHSQ6T4R5 1651 aa22.55■■□□□ 1.2
SND1-203ENST00000463020 SLC15A2Q16348 729 aa22.55■■□□□ 1.2
SND1-203ENST00000463020 ACSBG1Q96GR2 724 aa22.55■■□□□ 1.2
SND1-203ENST00000463020 ZNF692Q9BU19 519 aaPredicted RBP22.55■■□□□ 1.2
SND1-203ENST00000463020 PAPPAQ13219 1627 aa22.55■■□□□ 1.2
SND1-203ENST00000463020 EXOC5O00471 708 aa22.54■■□□□ 1.2
SND1-203ENST00000463020 NME9Q86XW9 330 aa22.54■■□□□ 1.2
SND1-203ENST00000463020 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.54■■□□□ 1.2
SND1-203ENST00000463020 SGIP1Q9BQI5 828 aa22.54■■□□□ 1.2
SND1-203ENST00000463020 ABCC6O95255 1503 aa22.53■■□□□ 1.2
SND1-203ENST00000463020 STK32BQ9NY57 414 aa22.53■■□□□ 1.2
SND1-203ENST00000463020 CCDC7Q96M83 1385 aa22.52■■□□□ 1.2
SND1-203ENST00000463020 FHDC1Q9C0D6 1143 aaPredicted RBP22.52■■□□□ 1.2
SND1-203ENST00000463020 USP54Q70EL1 1684 aa22.52■■□□□ 1.2
SND1-203ENST00000463020 SBNO2Q9Y2G9 1366 aa22.51■■□□□ 1.19
SND1-203ENST00000463020 NEUROD1Q13562 356 aa22.51■■□□□ 1.19
SND1-203ENST00000463020 ERBB3P21860 1342 aa22.51■■□□□ 1.19
SND1-203ENST00000463020 USP31Q70CQ4 1352 aa22.5■■□□□ 1.19
SND1-203ENST00000463020 GOLGB1Q14789 3259 aaKnown RBP22.5■■□□□ 1.19
SND1-203ENST00000463020 LTN1O94822 1766 aa22.49■■□□□ 1.19
SND1-203ENST00000463020 ZNF827Q17R98 1081 aa22.49■■□□□ 1.19
SND1-203ENST00000463020 SYT17Q9BSW7 474 aa22.49■■□□□ 1.19
SND1-203ENST00000463020 BTAF1O14981 1849 aa22.47■■□□□ 1.19
SND1-203ENST00000463020 LRRC4BQ9NT99 713 aa22.47■■□□□ 1.19
SND1-203ENST00000463020 NLRP2Q9NX02 1062 aa22.47■■□□□ 1.19
SND1-203ENST00000463020 DCAF8L1A6NGE4 600 aa22.46■■□□□ 1.19
SND1-203ENST00000463020 ZNF784Q8NCA9 323 aaPredicted RBP22.46■■□□□ 1.19
SND1-203ENST00000463020 ANKRD24Q8TF21 1146 aa22.45■■□□□ 1.18
SND1-203ENST00000463020 MTFR1LQ9H019 292 aa22.45■■□□□ 1.18
SND1-203ENST00000463020 IL2RBP14784 551 aa22.43■■□□□ 1.18
SND1-203ENST00000463020 SLC12A5Q9H2X9 1139 aa22.43■■□□□ 1.18
SND1-203ENST00000463020 A0A1W2PP64 1363 aa22.4■■□□□ 1.18
SND1-203ENST00000463020 KCNQ4P56696 695 aa22.4■■□□□ 1.18
SND1-203ENST00000463020 TMC1Q8TDI8 760 aa22.4■■□□□ 1.18
SND1-203ENST00000463020 ARXQ96QS3 562 aa22.39■■□□□ 1.17
SND1-203ENST00000463020 AKT1S1Q96B36 256 aa22.38■■□□□ 1.17
SND1-203ENST00000463020 EDC4Q6P2E9 1401 aaKnown RBP22.38■■□□□ 1.17
SND1-203ENST00000463020 FBLN1P23142 703 aa22.37■■□□□ 1.17
SND1-203ENST00000463020 TUBGCP6Q96RT7 1819 aa22.36■■□□□ 1.17
SND1-203ENST00000463020 CARD11Q9BXL7 1154 aa22.36■■□□□ 1.17
SND1-203ENST00000463020 LTV1Q96GA3 475 aaPredicted RBP22.35■■□□□ 1.17
SND1-203ENST00000463020 MAP3K5Q99683 1374 aa22.35■■□□□ 1.17
SND1-203ENST00000463020 FAM208AQ9UK61 1670 aaKnown RBP22.34■■□□□ 1.17
SND1-203ENST00000463020 DDX54Q8TDD1 881 aaKnown RBP22.34■■□□□ 1.17
SND1-203ENST00000463020 NSD2O96028 1365 aa22.34■■□□□ 1.17
SND1-203ENST00000463020 SHANK3Q9BYB0 1731 aa22.34■■□□□ 1.17
SND1-203ENST00000463020 PNPLA7Q6ZV29 1317 aa22.33■■□□□ 1.17
SND1-203ENST00000463020 HDGFL2Q7Z4V5 671 aaPredicted RBP22.33■■□□□ 1.17
SND1-203ENST00000463020 IP6K1Q92551 441 aa22.32■■□□□ 1.16
SND1-203ENST00000463020 COL24A1Q17RW2 1714 aa22.31■■□□□ 1.16
SND1-203ENST00000463020 DOT1LQ8TEK3 1739 aa22.31■■□□□ 1.16
SND1-203ENST00000463020 RGPD2P0DJD1 1756 aa22.31■■□□□ 1.16
SND1-203ENST00000463020 MEGF6O75095 1541 aa22.31■■□□□ 1.16
SND1-203ENST00000463020 CHD4Q14839 1912 aa22.3■■□□□ 1.16
SND1-203ENST00000463020 QSER1Q2KHR3 1735 aa22.3■■□□□ 1.16
SND1-203ENST00000463020 MAP3K19Q56UN5 1328 aa22.3■■□□□ 1.16
SND1-203ENST00000463020 KAT6BQ8WYB5 2073 aa22.29■■□□□ 1.16
SND1-203ENST00000463020 NLGN2Q8NFZ4 835 aa22.29■■□□□ 1.16
SND1-203ENST00000463020 PRIM1P49642 420 aaKnown RBP22.28■■□□□ 1.16
SND1-203ENST00000463020 KLHL34Q8N239 644 aa22.28■■□□□ 1.16
SND1-203ENST00000463020 TESK2Q96S53 571 aa22.27■■□□□ 1.16
SND1-203ENST00000463020 LY75O60449 1722 aa22.26■■□□□ 1.15
SND1-203ENST00000463020 HOXC9P31274 260 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms