RNA–Protein interactions for RNA: ENST00000462297.1

AUP1-203, Transcript of AUP1, lipid droplet regulating VLDL assembly factor, humanhuman

TSL 3

Gene AUP1, Length 457 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AUP1-203ENST00000462297 CNGB1Q14028 1251 aaPredicted RBP13.61□□□□□ -0.23
AUP1-203ENST00000462297 RRS1Q15050 365 aaKnown RBP13.61□□□□□ -0.23
AUP1-203ENST00000462297 PER1O15534 1290 aaPredicted RBP13.6□□□□□ -0.23
AUP1-203ENST00000462297 EVA1CP58658 441 aa13.6□□□□□ -0.23
AUP1-203ENST00000462297 VPS72Q15906 364 aa13.6□□□□□ -0.23
AUP1-203ENST00000462297 AMER1Q5JTC6 1135 aaPredicted RBP13.6□□□□□ -0.23
AUP1-203ENST00000462297 COL18A1P39060 1754 aa13.6□□□□□ -0.23
AUP1-203ENST00000462297 MAP3K19Q56UN5 1328 aa13.6□□□□□ -0.23
AUP1-203ENST00000462297 LTN1O94822 1766 aa13.59□□□□□ -0.23
AUP1-203ENST00000462297 LARP1Q6PKG0 1096 aaKnown RBP13.59□□□□□ -0.23
AUP1-203ENST00000462297 GJD4Q96KN9 370 aaPredicted RBP13.59□□□□□ -0.23
AUP1-203ENST00000462297 COL5A2P05997 1499 aaPredicted RBP13.59□□□□□ -0.23
AUP1-203ENST00000462297 ABCC6O95255 1503 aa13.59□□□□□ -0.23
AUP1-203ENST00000462297 CC2D1BQ5T0F9 858 aaKnown RBP13.58□□□□□ -0.24
AUP1-203ENST00000462297 GLI3P10071 1580 aa13.58□□□□□ -0.24
AUP1-203ENST00000462297 NSD2O96028 1365 aa13.58□□□□□ -0.24
AUP1-203ENST00000462297 ANKRD26Q9UPS8 1709 aa13.57□□□□□ -0.24
AUP1-203ENST00000462297 AMPHP49418 695 aa13.57□□□□□ -0.24
AUP1-203ENST00000462297 MORC1Q86VD1 984 aa13.57□□□□□ -0.24
AUP1-203ENST00000462297 USP35Q9P2H5 1018 aa13.57□□□□□ -0.24
AUP1-203ENST00000462297 EMILIN1Q9Y6C2 1016 aa13.57□□□□□ -0.24
AUP1-203ENST00000462297 SPATA31A5Q5VU36 1347 aa13.57□□□□□ -0.24
AUP1-203ENST00000462297 SPATA31A7Q8IWB4 1347 aa13.57□□□□□ -0.24
AUP1-203ENST00000462297 RGPD5Q99666 1765 aa13.56□□□□□ -0.24
AUP1-203ENST00000462297 PPM1GO15355 546 aaPredicted RBP13.56□□□□□ -0.24
AUP1-203ENST00000462297 CSB-PGBD3P0DP91 1061 aa13.56□□□□□ -0.24
AUP1-203ENST00000462297 HOXC9P31274 260 aa13.56□□□□□ -0.24
AUP1-203ENST00000462297 DDX10Q13206 875 aaKnown RBP13.56□□□□□ -0.24
AUP1-203ENST00000462297 IP6K1Q92551 441 aa13.56□□□□□ -0.24
AUP1-203ENST00000462297 LTV1Q96GA3 475 aaPredicted RBP13.56□□□□□ -0.24
AUP1-203ENST00000462297 FAM98CQ17RN3 349 aaKnown RBP13.55□□□□□ -0.24
AUP1-203ENST00000462297 SPATA31A1Q5TZJ5 1347 aa13.55□□□□□ -0.24
AUP1-203ENST00000462297 PEAK1Q9H792 1746 aa13.55□□□□□ -0.24
AUP1-203ENST00000462297 TOM1L2Q6ZVM7 507 aa13.54□□□□□ -0.24
AUP1-203ENST00000462297 ANKRD24Q8TF21 1146 aa13.54□□□□□ -0.24
AUP1-203ENST00000462297 WDR17Q8IZU2 1322 aa13.54□□□□□ -0.24
AUP1-203ENST00000462297 A0A0G2JS52 829 aa13.53□□□□□ -0.24
AUP1-203ENST00000462297 MYT1Q01538 1121 aa13.53□□□□□ -0.24
AUP1-203ENST00000462297 HSP90AB2PQ58FF8 381 aa13.53□□□□□ -0.24
AUP1-203ENST00000462297 POLKQ9UBT6 870 aa13.53□□□□□ -0.24
AUP1-203ENST00000462297 ERBB3P21860 1342 aa13.53□□□□□ -0.24
AUP1-203ENST00000462297 RTL1A6NKG5 1358 aa13.53□□□□□ -0.24
AUP1-203ENST00000462297 BLMP54132 1417 aaPredicted RBP13.53□□□□□ -0.24
AUP1-203ENST00000462297 CRB1P82279 1406 aa13.53□□□□□ -0.24
AUP1-203ENST00000462297 ZNF316A6NFI3 1004 aaPredicted RBP13.52□□□□□ -0.25
AUP1-203ENST00000462297 NLRP2Q9NX02 1062 aa13.52□□□□□ -0.25
AUP1-203ENST00000462297 FLT4P35916 1363 aa13.52□□□□□ -0.25
AUP1-203ENST00000462297 NPC1L1Q9UHC9 1359 aa13.51□□□□□ -0.25
AUP1-203ENST00000462297 SEPT12Q8IYM1 358 aa13.51□□□□□ -0.25
AUP1-203ENST00000462297 TCP11L2Q8N4U5 519 aa13.51□□□□□ -0.25
AUP1-203ENST00000462297 MAP2P11137 1827 aaKnown RBP13.5□□□□□ -0.25
AUP1-203ENST00000462297 THSD7AQ9UPZ6 1657 aa13.5□□□□□ -0.25
AUP1-203ENST00000462297 INSRP06213 1382 aa13.49□□□□□ -0.25
AUP1-203ENST00000462297 KIF24Q5T7B8 1368 aa13.49□□□□□ -0.25
AUP1-203ENST00000462297 ONECUT3O60422 494 aaPredicted RBP13.49□□□□□ -0.25
AUP1-203ENST00000462297 CARD10Q9BWT7 1032 aa13.49□□□□□ -0.25
AUP1-203ENST00000462297 BARGINQ6ZT62 677 aa13.48□□□□□ -0.25
AUP1-203ENST00000462297 USHBP1Q8N6Y0 703 aa13.48□□□□□ -0.25
AUP1-203ENST00000462297 SMG6Q86US8 1419 aaKnown RBP13.47□□□□□ -0.25
AUP1-203ENST00000462297 THRAP3Q9Y2W1 955 aaKnown RBP13.47□□□□□ -0.25
AUP1-203ENST00000462297 MTHFSP49914 203 aa13.46□□□□□ -0.25
AUP1-203ENST00000462297 NBPF6Q5VWK0 638 aa13.46□□□□□ -0.25
AUP1-203ENST00000462297 NBPF4Q96M43 638 aa13.46□□□□□ -0.25
AUP1-203ENST00000462297 RGPD2P0DJD1 1756 aa13.45□□□□□ -0.26
AUP1-203ENST00000462297 EIF4A2Q14240 407 aaKnown RBP13.45□□□□□ -0.26
AUP1-203ENST00000462297 FAM182BQ5T319 152 aa13.45□□□□□ -0.26
AUP1-203ENST00000462297 BRWD3Q6RI45 1802 aa13.45□□□□□ -0.26
AUP1-203ENST00000462297 FAM208AQ9UK61 1670 aaKnown RBP13.44□□□□□ -0.26
AUP1-203ENST00000462297 KRT27Q7Z3Y8 459 aa13.44□□□□□ -0.26
AUP1-203ENST00000462297 UPF1Q92900 1129 aaKnown RBP eCLIP13.44□□□□□ -0.26
AUP1-203ENST00000462297 DISP2A7MBM2 1401 aa13.44□□□□□ -0.26
AUP1-203ENST00000462297 WNK3Q9BYP7 1800 aa13.43□□□□□ -0.26
AUP1-203ENST00000462297 PPP2R1AP30153 589 aa13.43□□□□□ -0.26
AUP1-203ENST00000462297 EYA1Q99502 592 aa13.43□□□□□ -0.26
AUP1-203ENST00000462297 PARD3Q8TEW0 1356 aa13.43□□□□□ -0.26
AUP1-203ENST00000462297 IL2RBP14784 551 aa13.42□□□□□ -0.26
AUP1-203ENST00000462297 LRRC37A3O60309 1634 aa13.42□□□□□ -0.26
AUP1-203ENST00000462297 PARP4Q9UKK3 1724 aaKnown RBP13.42□□□□□ -0.26
AUP1-203ENST00000462297 MEGF6O75095 1541 aa13.41□□□□□ -0.26
AUP1-203ENST00000462297 PDE3BQ13370 1112 aa13.41□□□□□ -0.26
AUP1-203ENST00000462297 DDB1Q16531 1140 aa13.41□□□□□ -0.26
AUP1-203ENST00000462297 CDCA7Q9BWT1 371 aaPredicted RBP13.41□□□□□ -0.26
AUP1-203ENST00000462297 IL13P35225 146 aa13.4□□□□□ -0.26
AUP1-203ENST00000462297 CCDC125Q86Z20 511 aa13.39□□□□□ -0.27
AUP1-203ENST00000462297 RAPGEF4Q8WZA2 1011 aa13.39□□□□□ -0.27
AUP1-203ENST00000462297 COL3A1P02461 1466 aaPredicted RBP13.39□□□□□ -0.27
AUP1-203ENST00000462297 TNS2Q63HR2 1409 aa13.39□□□□□ -0.27
AUP1-203ENST00000462297 IGSF1Q8N6C5 1336 aa13.39□□□□□ -0.27
AUP1-203ENST00000462297 EXOC5O00471 708 aa13.38□□□□□ -0.27
AUP1-203ENST00000462297 DIAPH1O60610 1272 aaKnown RBP13.38□□□□□ -0.27
AUP1-203ENST00000462297 AEBP1Q8IUX7 1158 aa13.38□□□□□ -0.27
AUP1-203ENST00000462297 OVOS2A0A0G2JMS6 1433 aa13.38□□□□□ -0.27
AUP1-203ENST00000462297 NCAPD2Q15021 1401 aa13.38□□□□□ -0.27
AUP1-203ENST00000462297 TATP17735 454 aaPredicted RBP13.37□□□□□ -0.27
AUP1-203ENST00000462297 RALBP1Q15311 655 aa13.37□□□□□ -0.27
AUP1-203ENST00000462297 MARCH10Q8NA82 808 aaPredicted RBP13.37□□□□□ -0.27
AUP1-203ENST00000462297 CFAP53Q96M91 514 aa13.37□□□□□ -0.27
AUP1-203ENST00000462297 EP400Q96L91 3159 aa13.36□□□□□ -0.27
AUP1-203ENST00000462297 SULT6B1Q6IMI4 303 aa13.36□□□□□ -0.27
AUP1-203ENST00000462297 DDX54Q8TDD1 881 aaKnown RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms