RNA–Protein interactions for RNA: ENST00000461654.1

TMEM39A-203, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-203ENST00000461654 NSD3Q9BZ95 1437 aa20.58■□□□□ 0.88
TMEM39A-203ENST00000461654 AATKQ6ZMQ8 1374 aa20.58■□□□□ 0.88
TMEM39A-203ENST00000461654 NPC1L1Q9UHC9 1359 aa20.58■□□□□ 0.88
TMEM39A-203ENST00000461654 KCNH5Q8NCM2 988 aa20.57■□□□□ 0.88
TMEM39A-203ENST00000461654 PIK3C2AO00443 1686 aa20.57■□□□□ 0.88
TMEM39A-203ENST00000461654 A0A1W2PP64 1363 aa20.57■□□□□ 0.88
TMEM39A-203ENST00000461654 CGNL1Q0VF96 1302 aa20.56■□□□□ 0.88
TMEM39A-203ENST00000461654 CD163L1Q9NR16 1453 aa20.56■□□□□ 0.88
TMEM39A-203ENST00000461654 THSD7AQ9UPZ6 1657 aa20.55■□□□□ 0.88
TMEM39A-203ENST00000461654 A0A0G2JS52 829 aa20.55■□□□□ 0.88
TMEM39A-203ENST00000461654 MYT1Q01538 1121 aa20.55■□□□□ 0.88
TMEM39A-203ENST00000461654 AMER1Q5JTC6 1135 aaPredicted RBP20.55■□□□□ 0.88
TMEM39A-203ENST00000461654 LARP1Q6PKG0 1096 aaKnown RBP20.54■□□□□ 0.88
TMEM39A-203ENST00000461654 THRAP3Q9Y2W1 955 aaKnown RBP20.54■□□□□ 0.88
TMEM39A-203ENST00000461654 USP31Q70CQ4 1352 aa20.54■□□□□ 0.88
TMEM39A-203ENST00000461654 EP400Q96L91 3159 aa20.53■□□□□ 0.88
TMEM39A-203ENST00000461654 ARHGEF25Q86VW2 580 aa20.53■□□□□ 0.88
TMEM39A-203ENST00000461654 TCP11L2Q8N4U5 519 aa20.53■□□□□ 0.88
TMEM39A-203ENST00000461654 PARD3Q8TEW0 1356 aa20.53■□□□□ 0.88
TMEM39A-203ENST00000461654 MON2Q7Z3U7 1717 aa20.53■□□□□ 0.88
TMEM39A-203ENST00000461654 MYBBP1AQ9BQG0 1328 aaKnown RBP20.53■□□□□ 0.88
TMEM39A-203ENST00000461654 COL5A2P05997 1499 aaPredicted RBP20.52■□□□□ 0.88
TMEM39A-203ENST00000461654 NSD2O96028 1365 aa20.52■□□□□ 0.88
TMEM39A-203ENST00000461654 SF3B2Q13435 895 aaKnown RBP20.51■□□□□ 0.87
TMEM39A-203ENST00000461654 USP35Q9P2H5 1018 aa20.49■□□□□ 0.87
TMEM39A-203ENST00000461654 CRB1P82279 1406 aa20.49■□□□□ 0.87
TMEM39A-203ENST00000461654 EDC4Q6P2E9 1401 aaKnown RBP20.49■□□□□ 0.87
TMEM39A-203ENST00000461654 COL18A1P39060 1754 aa20.49■□□□□ 0.87
TMEM39A-203ENST00000461654 MORC1Q86VD1 984 aa20.48■□□□□ 0.87
TMEM39A-203ENST00000461654 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.48■□□□□ 0.87
TMEM39A-203ENST00000461654 MRS2Q9HD23 443 aa20.48■□□□□ 0.87
TMEM39A-203ENST00000461654 AXIN2Q9Y2T1 843 aa20.48■□□□□ 0.87
TMEM39A-203ENST00000461654 ZRANB1Q9UGI0 708 aa20.47■□□□□ 0.87
TMEM39A-203ENST00000461654 USP54Q70EL1 1684 aa20.46■□□□□ 0.87
TMEM39A-203ENST00000461654 FAM196AQ6ZSG2 479 aa20.46■□□□□ 0.87
TMEM39A-203ENST00000461654 DEFB132Q7Z7B7 95 aa20.46■□□□□ 0.87
TMEM39A-203ENST00000461654 NME9Q86XW9 330 aa20.46■□□□□ 0.87
TMEM39A-203ENST00000461654 NFAT5O94916 1531 aa20.46■□□□□ 0.87
TMEM39A-203ENST00000461654 ZBTB7CA1YPR0 619 aa20.45■□□□□ 0.86
TMEM39A-203ENST00000461654 WDR17Q8IZU2 1322 aa20.45■□□□□ 0.86
TMEM39A-203ENST00000461654 ABCC6O95255 1503 aa20.44■□□□□ 0.86
TMEM39A-203ENST00000461654 PDE3BQ13370 1112 aa20.44■□□□□ 0.86
TMEM39A-203ENST00000461654 FAM182BQ5T319 152 aa20.44■□□□□ 0.86
TMEM39A-203ENST00000461654 BAG6P46379 1132 aa20.43■□□□□ 0.86
TMEM39A-203ENST00000461654 FYB1O15117 783 aa20.42■□□□□ 0.86
TMEM39A-203ENST00000461654 SOX12O15370 315 aa20.42■□□□□ 0.86
TMEM39A-203ENST00000461654 TOM1L2Q6ZVM7 507 aa20.42■□□□□ 0.86
TMEM39A-203ENST00000461654 PPP2R1AP30153 589 aa20.41■□□□□ 0.86
TMEM39A-203ENST00000461654 CDCA7Q9BWT1 371 aaPredicted RBP20.41■□□□□ 0.86
TMEM39A-203ENST00000461654 CARD10Q9BWT7 1032 aa20.41■□□□□ 0.86
TMEM39A-203ENST00000461654 GGNBP2Q9H3C7 697 aa20.41■□□□□ 0.86
TMEM39A-203ENST00000461654 DISP2A7MBM2 1401 aa20.41■□□□□ 0.86
TMEM39A-203ENST00000461654 OVOS2A0A0J9YW53 1432 aa20.4■□□□□ 0.86
TMEM39A-203ENST00000461654 OVOS2Q6IE36 1432 aa20.4■□□□□ 0.86
TMEM39A-203ENST00000461654 PARP4Q9UKK3 1724 aaKnown RBP20.39■□□□□ 0.86
TMEM39A-203ENST00000461654 RGPD1P0DJD0 1748 aa20.39■□□□□ 0.85
TMEM39A-203ENST00000461654 COG3Q96JB2 828 aa20.38■□□□□ 0.85
TMEM39A-203ENST00000461654 TRIM37O94972 964 aa20.36■□□□□ 0.85
TMEM39A-203ENST00000461654 CSB-PGBD3P0DP91 1061 aa20.36■□□□□ 0.85
TMEM39A-203ENST00000461654 TNNT2P45379 298 aaPredicted RBP20.36■□□□□ 0.85
TMEM39A-203ENST00000461654 CCDC184Q52MB2 194 aa20.36■□□□□ 0.85
TMEM39A-203ENST00000461654 YTHDC1Q96MU7 727 aaKnown RBP20.36■□□□□ 0.85
TMEM39A-203ENST00000461654 KIF20BQ96Q89 1820 aa20.36■□□□□ 0.85
TMEM39A-203ENST00000461654 EN1Q05925 392 aaPredicted RBP20.35■□□□□ 0.85
TMEM39A-203ENST00000461654 DDB1Q16531 1140 aa20.35■□□□□ 0.85
TMEM39A-203ENST00000461654 RGPD5Q99666 1765 aa20.34■□□□□ 0.85
TMEM39A-203ENST00000461654 ERBB3P21860 1342 aa20.34■□□□□ 0.85
TMEM39A-203ENST00000461654 FAM9BQ8IZU0 186 aa20.33■□□□□ 0.85
TMEM39A-203ENST00000461654 TNS1Q9HBL0 1735 aaKnown RBP20.33■□□□□ 0.84
TMEM39A-203ENST00000461654 ANKRD26Q9UPS8 1709 aa20.33■□□□□ 0.84
TMEM39A-203ENST00000461654 IP6K1Q92551 441 aa20.32■□□□□ 0.84
TMEM39A-203ENST00000461654 CFAP53Q96M91 514 aa20.32■□□□□ 0.84
TMEM39A-203ENST00000461654 CAMKK2Q96RR4 588 aa20.32■□□□□ 0.84
TMEM39A-203ENST00000461654 OVOS2A0A0G2JMS6 1433 aa20.31■□□□□ 0.84
TMEM39A-203ENST00000461654 BCL9O00512 1426 aa20.31■□□□□ 0.84
TMEM39A-203ENST00000461654 APBA3O96018 575 aa20.31■□□□□ 0.84
TMEM39A-203ENST00000461654 LRRC37A3O60309 1634 aa20.31■□□□□ 0.84
TMEM39A-203ENST00000461654 PEAK1Q9H792 1746 aa20.3■□□□□ 0.84
TMEM39A-203ENST00000461654 LTN1O94822 1766 aa20.29■□□□□ 0.84
TMEM39A-203ENST00000461654 EXOC5O00471 708 aa20.29■□□□□ 0.84
TMEM39A-203ENST00000461654 EZH2Q15910 746 aaKnown RBP20.29■□□□□ 0.84
TMEM39A-203ENST00000461654 PNISRQ8TF01 805 aaKnown RBP20.29■□□□□ 0.84
TMEM39A-203ENST00000461654 ANKRD24Q8TF21 1146 aa20.29■□□□□ 0.84
TMEM39A-203ENST00000461654 MTHFSP49914 203 aa20.28■□□□□ 0.84
TMEM39A-203ENST00000461654 MARCH10Q8NA82 808 aaPredicted RBP20.28■□□□□ 0.84
TMEM39A-203ENST00000461654 MAP3K19Q56UN5 1328 aa20.27■□□□□ 0.84
TMEM39A-203ENST00000461654 WNK3Q9BYP7 1800 aa20.27■□□□□ 0.84
TMEM39A-203ENST00000461654 WDR43Q15061 677 aaKnown RBP eCLIP20.27■□□□□ 0.84
TMEM39A-203ENST00000461654 NLRP2Q9NX02 1062 aa20.27■□□□□ 0.84
TMEM39A-203ENST00000461654 BCL11BQ9C0K0 894 aaPredicted RBP20.25■□□□□ 0.83
TMEM39A-203ENST00000461654 IL2RBP14784 551 aa20.24■□□□□ 0.83
TMEM39A-203ENST00000461654 HOXC9P31274 260 aa20.24■□□□□ 0.83
TMEM39A-203ENST00000461654 PLSCR1O15162 318 aa20.23■□□□□ 0.83
TMEM39A-203ENST00000461654 FBLN1P23142 703 aa20.23■□□□□ 0.83
TMEM39A-203ENST00000461654 AMPHP49418 695 aa20.23■□□□□ 0.83
TMEM39A-203ENST00000461654 TNS2Q63HR2 1409 aa20.22■□□□□ 0.83
TMEM39A-203ENST00000461654 RTL1A6NKG5 1358 aa20.21■□□□□ 0.83
TMEM39A-203ENST00000461654 PPM1GO15355 546 aaPredicted RBP20.21■□□□□ 0.83
TMEM39A-203ENST00000461654 KIF24Q5T7B8 1368 aa20.21■□□□□ 0.83
TMEM39A-203ENST00000461654 CENPBP07199 599 aaPredicted RBP20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms