RNA–Protein interactions for RNA: ENST00000461577.5

TRAPPC12-213, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-213ENST00000461577 COL5A2P05997 1499 aaPredicted RBP14.61□□□□□ -0.07
TRAPPC12-213ENST00000461577 RGPD5Q99666 1765 aa14.6□□□□□ -0.07
TRAPPC12-213ENST00000461577 FAM98CQ17RN3 349 aaKnown RBP14.6□□□□□ -0.07
TRAPPC12-213ENST00000461577 LARP1Q6PKG0 1096 aaKnown RBP14.6□□□□□ -0.07
TRAPPC12-213ENST00000461577 SPATA31A1Q5TZJ5 1347 aa14.6□□□□□ -0.07
TRAPPC12-213ENST00000461577 SEPT12Q8IYM1 358 aa14.59□□□□□ -0.07
TRAPPC12-213ENST00000461577 PANK3Q9H999 370 aa14.59□□□□□ -0.07
TRAPPC12-213ENST00000461577 USP35Q9P2H5 1018 aa14.59□□□□□ -0.07
TRAPPC12-213ENST00000461577 KIF7Q2M1P5 1343 aa14.59□□□□□ -0.07
TRAPPC12-213ENST00000461577 ABCC6O95255 1503 aa14.58□□□□□ -0.08
TRAPPC12-213ENST00000461577 BRWD3Q6RI45 1802 aa14.58□□□□□ -0.08
TRAPPC12-213ENST00000461577 CSB-PGBD3P0DP91 1061 aa14.58□□□□□ -0.08
TRAPPC12-213ENST00000461577 AXIN2Q9Y2T1 843 aa14.58□□□□□ -0.08
TRAPPC12-213ENST00000461577 CGNL1Q0VF96 1302 aa14.58□□□□□ -0.08
TRAPPC12-213ENST00000461577 ONECUT3O60422 494 aaPredicted RBP14.57□□□□□ -0.08
TRAPPC12-213ENST00000461577 TOM1L2Q6ZVM7 507 aa14.57□□□□□ -0.08
TRAPPC12-213ENST00000461577 CRB1P82279 1406 aa14.57□□□□□ -0.08
TRAPPC12-213ENST00000461577 TCP11L2Q8N4U5 519 aa14.56□□□□□ -0.08
TRAPPC12-213ENST00000461577 WDR17Q8IZU2 1322 aa14.56□□□□□ -0.08
TRAPPC12-213ENST00000461577 AMPHP49418 695 aa14.55□□□□□ -0.08
TRAPPC12-213ENST00000461577 THRAP3Q9Y2W1 955 aaKnown RBP14.55□□□□□ -0.08
TRAPPC12-213ENST00000461577 FBLN1P23142 703 aa14.54□□□□□ -0.08
TRAPPC12-213ENST00000461577 BARGINQ6ZT62 677 aa14.54□□□□□ -0.08
TRAPPC12-213ENST00000461577 KRT27Q7Z3Y8 459 aa14.54□□□□□ -0.08
TRAPPC12-213ENST00000461577 IP6K1Q92551 441 aa14.54□□□□□ -0.08
TRAPPC12-213ENST00000461577 THSD7AQ9UPZ6 1657 aa14.53□□□□□ -0.08
TRAPPC12-213ENST00000461577 CCDC7Q96M83 1385 aa14.53□□□□□ -0.08
TRAPPC12-213ENST00000461577 MAP3K19Q56UN5 1328 aa14.53□□□□□ -0.08
TRAPPC12-213ENST00000461577 ANKRD24Q8TF21 1146 aa14.53□□□□□ -0.08
TRAPPC12-213ENST00000461577 UPF1Q92900 1129 aaKnown RBP eCLIP14.53□□□□□ -0.08
TRAPPC12-213ENST00000461577 KNSTRNQ9Y448 316 aa14.53□□□□□ -0.08
TRAPPC12-213ENST00000461577 ANKRD26Q9UPS8 1709 aa14.52□□□□□ -0.08
TRAPPC12-213ENST00000461577 BLMP54132 1417 aaPredicted RBP14.52□□□□□ -0.08
TRAPPC12-213ENST00000461577 RRS1Q15050 365 aaKnown RBP14.52□□□□□ -0.09
TRAPPC12-213ENST00000461577 CARD10Q9BWT7 1032 aa14.52□□□□□ -0.09
TRAPPC12-213ENST00000461577 ERBB3P21860 1342 aa14.51□□□□□ -0.09
TRAPPC12-213ENST00000461577 WASHC2AQ641Q2 1341 aa14.51□□□□□ -0.09
TRAPPC12-213ENST00000461577 HOXC9P31274 260 aa14.51□□□□□ -0.09
TRAPPC12-213ENST00000461577 LTV1Q96GA3 475 aaPredicted RBP14.51□□□□□ -0.09
TRAPPC12-213ENST00000461577 RTL1A6NKG5 1358 aa14.5□□□□□ -0.09
TRAPPC12-213ENST00000461577 NSD2O96028 1365 aa14.5□□□□□ -0.09
TRAPPC12-213ENST00000461577 NLRP2Q9NX02 1062 aa14.5□□□□□ -0.09
TRAPPC12-213ENST00000461577 WNK3Q9BYP7 1800 aa14.5□□□□□ -0.09
TRAPPC12-213ENST00000461577 ZEB1P37275 1124 aaPredicted RBP14.49□□□□□ -0.09
TRAPPC12-213ENST00000461577 PDE3BQ13370 1112 aa14.49□□□□□ -0.09
TRAPPC12-213ENST00000461577 MAP2P11137 1827 aaKnown RBP14.49□□□□□ -0.09
TRAPPC12-213ENST00000461577 FAM208AQ9UK61 1670 aaKnown RBP14.49□□□□□ -0.09
TRAPPC12-213ENST00000461577 TNNT2P45379 298 aaPredicted RBP14.48□□□□□ -0.09
TRAPPC12-213ENST00000461577 MORC1Q86VD1 984 aa14.48□□□□□ -0.09
TRAPPC12-213ENST00000461577 CDCA7Q9BWT1 371 aaPredicted RBP14.48□□□□□ -0.09
TRAPPC12-213ENST00000461577 PARP4Q9UKK3 1724 aaKnown RBP14.48□□□□□ -0.09
TRAPPC12-213ENST00000461577 FLT4P35916 1363 aa14.47□□□□□ -0.09
TRAPPC12-213ENST00000461577 PPM1GO15355 546 aaPredicted RBP14.47□□□□□ -0.09
TRAPPC12-213ENST00000461577 SMG6Q86US8 1419 aaKnown RBP14.47□□□□□ -0.09
TRAPPC12-213ENST00000461577 KIF24Q5T7B8 1368 aa14.47□□□□□ -0.09
TRAPPC12-213ENST00000461577 PEAK1Q9H792 1746 aa14.46□□□□□ -0.09
TRAPPC12-213ENST00000461577 DDB1Q16531 1140 aa14.46□□□□□ -0.09
TRAPPC12-213ENST00000461577 FAM182BQ5T319 152 aa14.46□□□□□ -0.09
TRAPPC12-213ENST00000461577 CCDC125Q86Z20 511 aa14.46□□□□□ -0.09
TRAPPC12-213ENST00000461577 EMILIN1Q9Y6C2 1016 aa14.46□□□□□ -0.09
TRAPPC12-213ENST00000461577 SF3B2Q13435 895 aaKnown RBP14.45□□□□□ -0.1
TRAPPC12-213ENST00000461577 HSP90AB2PQ58FF8 381 aa14.45□□□□□ -0.1
TRAPPC12-213ENST00000461577 INSRP06213 1382 aa14.45□□□□□ -0.1
TRAPPC12-213ENST00000461577 RGPD2P0DJD1 1756 aa14.45□□□□□ -0.1
TRAPPC12-213ENST00000461577 LRRC37A3O60309 1634 aa14.44□□□□□ -0.1
TRAPPC12-213ENST00000461577 AMER1Q5JTC6 1135 aaPredicted RBP14.44□□□□□ -0.1
TRAPPC12-213ENST00000461577 DISP2A7MBM2 1401 aa14.43□□□□□ -0.1
TRAPPC12-213ENST00000461577 EXOC5O00471 708 aa14.43□□□□□ -0.1
TRAPPC12-213ENST00000461577 PER1O15534 1290 aaPredicted RBP14.43□□□□□ -0.1
TRAPPC12-213ENST00000461577 IL2RBP14784 551 aa14.43□□□□□ -0.1
TRAPPC12-213ENST00000461577 FAM196AQ6ZSG2 479 aa14.43□□□□□ -0.1
TRAPPC12-213ENST00000461577 POLKQ9UBT6 870 aa14.43□□□□□ -0.1
TRAPPC12-213ENST00000461577 CC2D1BQ5T0F9 858 aaKnown RBP14.42□□□□□ -0.1
TRAPPC12-213ENST00000461577 RGPD1P0DJD0 1748 aa14.41□□□□□ -0.1
TRAPPC12-213ENST00000461577 CNGB1Q14028 1251 aaPredicted RBP14.41□□□□□ -0.1
TRAPPC12-213ENST00000461577 NBPF6Q5VWK0 638 aa14.4□□□□□ -0.1
TRAPPC12-213ENST00000461577 NBPF4Q96M43 638 aa14.4□□□□□ -0.1
TRAPPC12-213ENST00000461577 OVOS2A0A0G2JMS6 1433 aa14.4□□□□□ -0.1
TRAPPC12-213ENST00000461577 TNS2Q63HR2 1409 aa14.4□□□□□ -0.1
TRAPPC12-213ENST00000461577 USHBP1Q8N6Y0 703 aa14.39□□□□□ -0.11
TRAPPC12-213ENST00000461577 NPC1L1Q9UHC9 1359 aa14.38□□□□□ -0.11
TRAPPC12-213ENST00000461577 EP400Q96L91 3159 aa14.38□□□□□ -0.11
TRAPPC12-213ENST00000461577 TRIM37O94972 964 aa14.38□□□□□ -0.11
TRAPPC12-213ENST00000461577 BAG6P46379 1132 aa14.38□□□□□ -0.11
TRAPPC12-213ENST00000461577 MARCH10Q8NA82 808 aaPredicted RBP14.38□□□□□ -0.11
TRAPPC12-213ENST00000461577 RAPGEF4Q8WZA2 1011 aa14.38□□□□□ -0.11
TRAPPC12-213ENST00000461577 TATP17735 454 aaPredicted RBP14.36□□□□□ -0.11
TRAPPC12-213ENST00000461577 EIF4A2Q14240 407 aaKnown RBP14.36□□□□□ -0.11
TRAPPC12-213ENST00000461577 DEFB132Q7Z7B7 95 aa14.36□□□□□ -0.11
TRAPPC12-213ENST00000461577 TNS1Q9HBL0 1735 aaKnown RBP14.35□□□□□ -0.11
TRAPPC12-213ENST00000461577 SBF2Q86WG5 1849 aa14.35□□□□□ -0.11
TRAPPC12-213ENST00000461577 MEGF6O75095 1541 aa14.35□□□□□ -0.11
TRAPPC12-213ENST00000461577 APBA3O96018 575 aa14.34□□□□□ -0.11
TRAPPC12-213ENST00000461577 MTHFSP49914 203 aa14.34□□□□□ -0.11
TRAPPC12-213ENST00000461577 ZCRB1Q8TBF4 217 aaKnown RBP14.34□□□□□ -0.11
TRAPPC12-213ENST00000461577 DDX54Q8TDD1 881 aaKnown RBP14.34□□□□□ -0.11
TRAPPC12-213ENST00000461577 EYA1Q99502 592 aa14.34□□□□□ -0.11
TRAPPC12-213ENST00000461577 KAT6BQ8WYB5 2073 aa14.33□□□□□ -0.12
TRAPPC12-213ENST00000461577 BCL9O00512 1426 aa14.32□□□□□ -0.12
TRAPPC12-213ENST00000461577 EN1Q05925 392 aaPredicted RBP14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms