RNA–Protein interactions for RNA: ENST00000461539.5

C9orf78-203, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 5

Gene C9orf78, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-203ENST00000461539 WDR43Q15061 677 aaKnown RBP eCLIP13.07□□□□□ -0.32
C9orf78-203ENST00000461539 INSRP06213 1382 aa13.07□□□□□ -0.32
C9orf78-203ENST00000461539 IL13P35225 146 aa13.06□□□□□ -0.32
C9orf78-203ENST00000461539 EVA1CP58658 441 aa13.06□□□□□ -0.32
C9orf78-203ENST00000461539 ANKRD24Q8TF21 1146 aa13.06□□□□□ -0.32
C9orf78-203ENST00000461539 NGLY1Q96IV0 654 aa13.06□□□□□ -0.32
C9orf78-203ENST00000461539 C8orf37Q96NL8 207 aa13.06□□□□□ -0.32
C9orf78-203ENST00000461539 CDK12Q9NYV4 1490 aaPredicted RBP13.05□□□□□ -0.32
C9orf78-203ENST00000461539 KIF20BQ96Q89 1820 aa13.05□□□□□ -0.32
C9orf78-203ENST00000461539 U2AF1L5P0DN76 240 aaPredicted RBP13.05□□□□□ -0.32
C9orf78-203ENST00000461539 U2AF1Q01081 240 aaKnown RBP eCLIP13.05□□□□□ -0.32
C9orf78-203ENST00000461539 FAM9BQ8IZU0 186 aa13.05□□□□□ -0.32
C9orf78-203ENST00000461539 PNISRQ8TF01 805 aaKnown RBP13.05□□□□□ -0.32
C9orf78-203ENST00000461539 STRN4Q9NRL3 753 aa13.05□□□□□ -0.32
C9orf78-203ENST00000461539 BTG4Q9NY30 223 aa13.05□□□□□ -0.32
C9orf78-203ENST00000461539 BLMP54132 1417 aaPredicted RBP13.04□□□□□ -0.32
C9orf78-203ENST00000461539 NLRP2Q9NX02 1062 aa13.03□□□□□ -0.32
C9orf78-203ENST00000461539 ERBB3P21860 1342 aa13.03□□□□□ -0.32
C9orf78-203ENST00000461539 USP54Q70EL1 1684 aa13.02□□□□□ -0.32
C9orf78-203ENST00000461539 EYA1Q99502 592 aa13.02□□□□□ -0.33
C9orf78-203ENST00000461539 ADAMTS8Q9UP79 889 aa13.02□□□□□ -0.33
C9orf78-203ENST00000461539 COL22A1Q8NFW1 1626 aaPredicted RBP13.02□□□□□ -0.33
C9orf78-203ENST00000461539 HMOX1P09601 288 aa13.01□□□□□ -0.33
C9orf78-203ENST00000461539 TOM1L2Q6ZVM7 507 aa13.01□□□□□ -0.33
C9orf78-203ENST00000461539 COL3A1P02461 1466 aaPredicted RBP13.01□□□□□ -0.33
C9orf78-203ENST00000461539 LRP6O75581 1613 aa13.01□□□□□ -0.33
C9orf78-203ENST00000461539 ANKRD26Q9UPS8 1709 aa13□□□□□ -0.33
C9orf78-203ENST00000461539 WDR17Q8IZU2 1322 aa13□□□□□ -0.33
C9orf78-203ENST00000461539 NBPF6Q5VWK0 638 aa13□□□□□ -0.33
C9orf78-203ENST00000461539 SULT6B1Q6IMI4 303 aa13□□□□□ -0.33
C9orf78-203ENST00000461539 LARP1Q6PKG0 1096 aaKnown RBP13□□□□□ -0.33
C9orf78-203ENST00000461539 ILDR1Q86SU0 546 aaPredicted RBP13□□□□□ -0.33
C9orf78-203ENST00000461539 USHBP1Q8N6Y0 703 aa13□□□□□ -0.33
C9orf78-203ENST00000461539 NBPF4Q96M43 638 aa13□□□□□ -0.33
C9orf78-203ENST00000461539 MARF1Q9Y4F3 1742 aaKnown RBP12.99□□□□□ -0.33
C9orf78-203ENST00000461539 PHRF1Q9P1Y6 1649 aaKnown RBP12.99□□□□□ -0.33
C9orf78-203ENST00000461539 IGSF1Q8N6C5 1336 aa12.99□□□□□ -0.33
C9orf78-203ENST00000461539 UNC5CLQ8IV45 518 aa12.99□□□□□ -0.33
C9orf78-203ENST00000461539 FNBP4Q8N3X1 1017 aaPredicted RBP12.99□□□□□ -0.33
C9orf78-203ENST00000461539 USP21Q9UK80 565 aa12.99□□□□□ -0.33
C9orf78-203ENST00000461539 CCDC9Q9Y3X0 531 aaKnown RBP12.99□□□□□ -0.33
C9orf78-203ENST00000461539 SHPRHQ149N8 1683 aa12.99□□□□□ -0.33
C9orf78-203ENST00000461539 AEBP1Q8IUX7 1158 aa12.98□□□□□ -0.33
C9orf78-203ENST00000461539 USP35Q9P2H5 1018 aa12.98□□□□□ -0.33
C9orf78-203ENST00000461539 CAMTA1Q9Y6Y1 1673 aa12.98□□□□□ -0.33
C9orf78-203ENST00000461539 COL5A2P05997 1499 aaPredicted RBP12.97□□□□□ -0.33
C9orf78-203ENST00000461539 PEAK1Q9H792 1746 aa12.97□□□□□ -0.33
C9orf78-203ENST00000461539 AFF2P51816 1311 aa12.97□□□□□ -0.33
C9orf78-203ENST00000461539 FCHSD2O94868 740 aa12.97□□□□□ -0.33
C9orf78-203ENST00000461539 PRKAR2BP31323 418 aa12.97□□□□□ -0.33
C9orf78-203ENST00000461539 CCDC146Q8IYE0 955 aa12.97□□□□□ -0.33
C9orf78-203ENST00000461539 CARD10Q9BWT7 1032 aa12.97□□□□□ -0.33
C9orf78-203ENST00000461539 PNNQ9H307 717 aaKnown RBP12.97□□□□□ -0.33
C9orf78-203ENST00000461539 ABCC6O95255 1503 aa12.97□□□□□ -0.33
C9orf78-203ENST00000461539 NEFMP07197 916 aa12.96□□□□□ -0.33
C9orf78-203ENST00000461539 RSPH6AQ9H0K4 717 aa12.96□□□□□ -0.33
C9orf78-203ENST00000461539 SLIT2O94813 1529 aa12.96□□□□□ -0.33
C9orf78-203ENST00000461539 RAPGEF4Q8WZA2 1011 aa12.95□□□□□ -0.34
C9orf78-203ENST00000461539 CRYBG1Q9Y4K1 1723 aa12.95□□□□□ -0.34
C9orf78-203ENST00000461539 MAPK8IP3Q9UPT6 1336 aa12.94□□□□□ -0.34
C9orf78-203ENST00000461539 VPS72Q15906 364 aa12.94□□□□□ -0.34
C9orf78-203ENST00000461539 TCP11L2Q8N4U5 519 aa12.94□□□□□ -0.34
C9orf78-203ENST00000461539 RUNDC1Q96C34 613 aa12.94□□□□□ -0.34
C9orf78-203ENST00000461539 CRB1P82279 1406 aa12.94□□□□□ -0.34
C9orf78-203ENST00000461539 BCL9LQ86UU0 1499 aa12.93□□□□□ -0.34
C9orf78-203ENST00000461539 SENP3-EIF4A1A0A087X0R7 540 aa12.93□□□□□ -0.34
C9orf78-203ENST00000461539 TATP17735 454 aaPredicted RBP12.93□□□□□ -0.34
C9orf78-203ENST00000461539 ABCA3Q99758 1704 aa12.93□□□□□ -0.34
C9orf78-203ENST00000461539 SPATA31A1Q5TZJ5 1347 aa12.92□□□□□ -0.34
C9orf78-203ENST00000461539 SPATA31A5Q5VU36 1347 aa12.92□□□□□ -0.34
C9orf78-203ENST00000461539 SPATA31A7Q8IWB4 1347 aa12.92□□□□□ -0.34
C9orf78-203ENST00000461539 IL2RBP14784 551 aa12.92□□□□□ -0.34
C9orf78-203ENST00000461539 PLEKHF1Q96S99 279 aa12.92□□□□□ -0.34
C9orf78-203ENST00000461539 PHF23Q9BUL5 403 aaPredicted RBP12.92□□□□□ -0.34
C9orf78-203ENST00000461539 TRPC5Q9UL62 973 aaPredicted RBP12.92□□□□□ -0.34
C9orf78-203ENST00000461539 KDRP35968 1356 aa12.92□□□□□ -0.34
C9orf78-203ENST00000461539 COL14A1Q05707 1796 aaKnown RBP12.92□□□□□ -0.34
C9orf78-203ENST00000461539 APAF1O14727 1248 aa12.91□□□□□ -0.34
C9orf78-203ENST00000461539 ZNF772Q68DY9 489 aaPredicted RBP12.91□□□□□ -0.34
C9orf78-203ENST00000461539 PHACTR3Q96KR7 559 aa12.91□□□□□ -0.34
C9orf78-203ENST00000461539 YTHDC1Q96MU7 727 aaKnown RBP12.91□□□□□ -0.34
C9orf78-203ENST00000461539 QTRT2Q9H974 415 aaKnown RBP12.91□□□□□ -0.34
C9orf78-203ENST00000461539 LMO7Q8WWI1 1683 aa12.91□□□□□ -0.34
C9orf78-203ENST00000461539 HNRNPUQ00839 825 aaKnown RBP eCLIP12.9□□□□□ -0.34
C9orf78-203ENST00000461539 PLEKHO1Q53GL0 409 aaPredicted RBP12.9□□□□□ -0.34
C9orf78-203ENST00000461539 GJD4Q96KN9 370 aaPredicted RBP12.9□□□□□ -0.34
C9orf78-203ENST00000461539 THRAP3Q9Y2W1 955 aaKnown RBP12.9□□□□□ -0.34
C9orf78-203ENST00000461539 RRP7AQ9Y3A4 280 aaKnown RBP12.9□□□□□ -0.34
C9orf78-203ENST00000461539 COL18A1P39060 1754 aa12.89□□□□□ -0.35
C9orf78-203ENST00000461539 A0A0G2JS52 829 aa12.89□□□□□ -0.35
C9orf78-203ENST00000461539 MYT1Q01538 1121 aa12.89□□□□□ -0.35
C9orf78-203ENST00000461539 NEUROD2Q15784 382 aa12.89□□□□□ -0.35
C9orf78-203ENST00000461539 AMOTQ4VCS5 1084 aa12.89□□□□□ -0.35
C9orf78-203ENST00000461539 SALL2Q9Y467 1007 aaPredicted RBP12.89□□□□□ -0.35
C9orf78-203ENST00000461539 NCAPD2Q15021 1401 aa12.88□□□□□ -0.35
C9orf78-203ENST00000461539 FAM98CQ17RN3 349 aaKnown RBP12.88□□□□□ -0.35
C9orf78-203ENST00000461539 MTHFSDQ2M296 383 aaKnown RBP12.88□□□□□ -0.35
C9orf78-203ENST00000461539 BARGINQ6ZT62 677 aa12.88□□□□□ -0.35
C9orf78-203ENST00000461539 GAS2L2Q8NHY3 880 aa12.88□□□□□ -0.35
C9orf78-203ENST00000461539 CDCA7Q9BWT1 371 aaPredicted RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms