RNA–Protein interactions for RNA: ENST00000461289.2

CHL1-209, Transcript of cell adhesion molecule L1 like, humanhuman

TSL 2

Gene CHL1, Length 462 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1-209ENST00000461289 USP17L3A6NCW0 530 aa11.61□□□□□ -0.55
CHL1-209ENST00000461289 USP17L4A6NCW7 530 aa11.61□□□□□ -0.55
CHL1-209ENST00000461289 RC3H1Q5TC82 1133 aaKnown RBP11.61□□□□□ -0.55
CHL1-209ENST00000461289 USP17L2Q6R6M4 530 aa11.61□□□□□ -0.55
CHL1-209ENST00000461289 USP17L1Q7RTZ2 530 aa11.61□□□□□ -0.55
CHL1-209ENST00000461289 TRMT44Q8IYL2 757 aaKnown RBP11.61□□□□□ -0.55
CHL1-209ENST00000461289 PLPP7Q8NBV4 271 aa11.61□□□□□ -0.55
CHL1-209ENST00000461289 GIGYF1O75420 1035 aaPredicted RBP11.6□□□□□ -0.55
CHL1-209ENST00000461289 RAB15P59190 212 aa11.6□□□□□ -0.55
CHL1-209ENST00000461289 VASH1Q7L8A9 365 aaPredicted RBP11.6□□□□□ -0.55
CHL1-209ENST00000461289 DEPDC4Q8N2C3 294 aa11.6□□□□□ -0.55
CHL1-209ENST00000461289 DOLKQ9UPQ8 538 aa11.6□□□□□ -0.55
CHL1-209ENST00000461289 MAP7D1Q3KQU3 841 aa11.59□□□□□ -0.55
CHL1-209ENST00000461289 CDCA8Q53HL2 280 aa11.59□□□□□ -0.55
CHL1-209ENST00000461289 VRTNQ9H8Y1 702 aa11.59□□□□□ -0.55
CHL1-209ENST00000461289 PDIA4P13667 645 aaKnown RBP11.58□□□□□ -0.56
CHL1-209ENST00000461289 EML3Q32P44 896 aa11.57□□□□□ -0.56
CHL1-209ENST00000461289 PLEKHM2Q8IWE5 1019 aa11.57□□□□□ -0.56
CHL1-209ENST00000461289 KCTD15Q96SI1 283 aaPredicted RBP11.57□□□□□ -0.56
CHL1-209ENST00000461289 A0A0G2JS52 829 aa11.56□□□□□ -0.56
CHL1-209ENST00000461289 LZTS3O60299 673 aaPredicted RBP11.56□□□□□ -0.56
CHL1-209ENST00000461289 CSB-PGBD3P0DP91 1061 aa11.56□□□□□ -0.56
CHL1-209ENST00000461289 NCOA4Q13772 614 aa11.56□□□□□ -0.56
CHL1-209ENST00000461289 OXLD1Q5BKU9 147 aa11.56□□□□□ -0.56
CHL1-209ENST00000461289 PHTF2Q8N3S3 785 aa11.56□□□□□ -0.56
CHL1-209ENST00000461289 SEPT12Q8IYM1 358 aa11.55□□□□□ -0.56
CHL1-209ENST00000461289 RETREG2Q8NC44 543 aa11.55□□□□□ -0.56
CHL1-209ENST00000461289 ESF1Q9H501 851 aaKnown RBP11.55□□□□□ -0.56
CHL1-209ENST00000461289 MAP4K5Q9Y4K4 846 aa11.55□□□□□ -0.56
CHL1-209ENST00000461289 PCDHB11Q9Y5F2 797 aa11.55□□□□□ -0.56
CHL1-209ENST00000461289 PDE4CQ08493 712 aa11.54□□□□□ -0.56
CHL1-209ENST00000461289 CCDC125Q86Z20 511 aa11.54□□□□□ -0.56
CHL1-209ENST00000461289 MKRN1Q9UHC7 482 aaKnown RBP11.54□□□□□ -0.56
CHL1-209ENST00000461289 WNT7AO00755 349 aa11.53□□□□□ -0.56
CHL1-209ENST00000461289 ZNF697Q5TEC3 545 aa11.53□□□□□ -0.56
CHL1-209ENST00000461289 SPRYD7Q5W111 196 aa11.53□□□□□ -0.56
CHL1-209ENST00000461289 LARP1Q6PKG0 1096 aaKnown RBP11.53□□□□□ -0.56
CHL1-209ENST00000461289 EMID1Q96A84 441 aaPredicted RBP11.53□□□□□ -0.56
CHL1-209ENST00000461289 CCDC85AQ96PX6 553 aaPredicted RBP11.53□□□□□ -0.56
CHL1-209ENST00000461289 PRKD2Q9BZL6 878 aa11.53□□□□□ -0.56
CHL1-209ENST00000461289 TLL2Q9Y6L7 1015 aa11.53□□□□□ -0.56
CHL1-209ENST00000461289 ESPNB1AK53 854 aa11.52□□□□□ -0.57
CHL1-209ENST00000461289 ATP5J2-PTCD1G3V325 749 aa11.52□□□□□ -0.57
CHL1-209ENST00000461289 FSHRP23945 695 aa11.52□□□□□ -0.57
CHL1-209ENST00000461289 FOXC1Q12948 553 aa11.52□□□□□ -0.57
CHL1-209ENST00000461289 TRIM52Q96A61 297 aa11.52□□□□□ -0.57
CHL1-209ENST00000461289 SIRT1Q96EB6 747 aa11.52□□□□□ -0.57
CHL1-209ENST00000461289 NOD1Q9Y239 953 aa11.52□□□□□ -0.57
CHL1-209ENST00000461289 RASA1P20936 1047 aa11.51□□□□□ -0.57
CHL1-209ENST00000461289 INTS6LQ5JSJ4 861 aaKnown RBP11.51□□□□□ -0.57
CHL1-209ENST00000461289 TRIM50Q86XT4 487 aa11.51□□□□□ -0.57
CHL1-209ENST00000461289 MRGPRX2Q96LB1 330 aa11.51□□□□□ -0.57
CHL1-209ENST00000461289 ATG7O95352 703 aa11.5□□□□□ -0.57
CHL1-209ENST00000461289 MYCP01106 439 aaPredicted RBP11.5□□□□□ -0.57
CHL1-209ENST00000461289 SRPK2P78362 688 aaKnown RBP11.5□□□□□ -0.57
CHL1-209ENST00000461289 TSGA10IPQ3SY00 556 aa11.5□□□□□ -0.57
CHL1-209ENST00000461289 CHIC2Q9UKJ5 165 aa11.5□□□□□ -0.57
CHL1-209ENST00000461289 DHX9Q08211 1270 aaKnown RBP11.49□□□□□ -0.57
CHL1-209ENST00000461289 KANK4Q5T7N3 995 aaPredicted RBP11.49□□□□□ -0.57
CHL1-209ENST00000461289 TRAF7Q6Q0C0 670 aa11.49□□□□□ -0.57
CHL1-209ENST00000461289 ZNF598Q86UK7 904 aaKnown RBP11.49□□□□□ -0.57
CHL1-209ENST00000461289 CDK15Q96Q40 435 aa11.49□□□□□ -0.57
CHL1-209ENST00000461289 RBM19Q9Y4C8 960 aaKnown RBP11.49□□□□□ -0.57
CHL1-209ENST00000461289 ATP1A2P50993 1020 aa11.48□□□□□ -0.57
CHL1-209ENST00000461289 PSME1Q06323 249 aa11.48□□□□□ -0.57
CHL1-209ENST00000461289 USP4Q13107 963 aa11.48□□□□□ -0.57
CHL1-209ENST00000461289 V9GY48 417 aaPredicted RBP11.48□□□□□ -0.57
CHL1-209ENST00000461289 ADH1CP00326 375 aa11.47□□□□□ -0.57
CHL1-209ENST00000461289 ERVH48-1M5A8F1 160 aa11.46□□□□□ -0.57
CHL1-209ENST00000461289 ALDH1A1P00352 501 aa11.46□□□□□ -0.57
CHL1-209ENST00000461289 OGFOD1Q8N543 542 aa11.46□□□□□ -0.57
CHL1-209ENST00000461289 MPNDQ8N594 471 aa11.46□□□□□ -0.57
CHL1-209ENST00000461289 CDCA7Q9BWT1 371 aaPredicted RBP11.46□□□□□ -0.57
CHL1-209ENST00000461289 WASF2Q9Y6W5 498 aa11.46□□□□□ -0.57
CHL1-209ENST00000461289 FAM196BA6NMK8 535 aa11.45□□□□□ -0.58
CHL1-209ENST00000461289 USP17L15C9J2P7 530 aa11.45□□□□□ -0.58
CHL1-209ENST00000461289 USP17L10C9JJH3 530 aa11.45□□□□□ -0.58
CHL1-209ENST00000461289 USP17L13C9JLJ4 530 aa11.45□□□□□ -0.58
CHL1-209ENST00000461289 USP17L12C9JPN9 530 aa11.45□□□□□ -0.58
CHL1-209ENST00000461289 USP17L11C9JVI0 530 aa11.45□□□□□ -0.58
CHL1-209ENST00000461289 USP17L21D6R901 530 aa11.45□□□□□ -0.58
CHL1-209ENST00000461289 USP17L18D6R9N7 530 aa11.45□□□□□ -0.58
CHL1-209ENST00000461289 USP17L22D6RA61 530 aa11.45□□□□□ -0.58
CHL1-209ENST00000461289 USP17L17D6RBQ6 530 aa11.45□□□□□ -0.58
CHL1-209ENST00000461289 USP17L19D6RCP7 530 aa11.45□□□□□ -0.58
CHL1-209ENST00000461289 USP17L20D6RJB6 530 aa11.45□□□□□ -0.58
CHL1-209ENST00000461289 SIAH2O43255 324 aa11.45□□□□□ -0.58
CHL1-209ENST00000461289 GTF2IP78347 998 aa11.45□□□□□ -0.58
CHL1-209ENST00000461289 USP17L24Q0WX57 530 aa11.45□□□□□ -0.58
CHL1-209ENST00000461289 NR5A1Q13285 461 aa11.45□□□□□ -0.58
CHL1-209ENST00000461289 ZNF594Q96JF6 807 aaPredicted RBP11.45□□□□□ -0.58
CHL1-209ENST00000461289 DNAAF2Q9NVR5 837 aaKnown RBP11.45□□□□□ -0.58
CHL1-209ENST00000461289 NOVA2Q9UNW9 492 aaKnown RBP11.45□□□□□ -0.58
CHL1-209ENST00000461289 USTQ9Y2C2 406 aa11.45□□□□□ -0.58
CHL1-209ENST00000461289 CCDC116Q8IYX3 515 aa11.44□□□□□ -0.58
CHL1-209ENST00000461289 TTC24A2A3L6 582 aaPredicted RBP11.43□□□□□ -0.58
CHL1-209ENST00000461289 GRM5P41594 1212 aa11.43□□□□□ -0.58
CHL1-209ENST00000461289 CRTC2Q53ET0 693 aaPredicted RBP11.43□□□□□ -0.58
CHL1-209ENST00000461289 TRAIPQ9BWF2 469 aa11.43□□□□□ -0.58
CHL1-209ENST00000461289 CYP4X1Q8N118 509 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms