RNA–Protein interactions for RNA: ENST00000461289.2

CHL1-209, Transcript of cell adhesion molecule L1 like, humanhuman

TSL 2

Gene CHL1, Length 462 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1-209ENST00000461289 AEBP2Q6ZN18 517 aaPredicted RBP28.61■■■□□ 2.17
CHL1-209ENST00000461289 CHIC1Q5VXU3 224 aa28.43■■■□□ 2.14
CHL1-209ENST00000461289 PHF23Q9BUL5 403 aaPredicted RBP24.98■■□□□ 1.59
CHL1-209ENST00000461289 SENP3Q9H4L4 574 aaPredicted RBP24.33■■□□□ 1.49
CHL1-209ENST00000461289 PLPPR3Q6T4P5 718 aa23.35■■□□□ 1.33
CHL1-209ENST00000461289 FOXD1Q16676 465 aa22.52■■□□□ 1.2
CHL1-209ENST00000461289 ADRA2BP18089 450 aa21.99■■□□□ 1.11
CHL1-209ENST00000461289 PPP6R1Q9UPN7 881 aa21.91■■□□□ 1.1
CHL1-209ENST00000461289 POTEDQ86YR6 584 aa21.65■■□□□ 1.06
CHL1-209ENST00000461289 PIAS4Q8N2W9 510 aaPredicted RBP21.38■■□□□ 1.01
CHL1-209ENST00000461289 MSH5O43196 834 aa21.27■■□□□ 1
CHL1-209ENST00000461289 KCNA4P22459 653 aa20.61■□□□□ 0.89
CHL1-209ENST00000461289 PPP4R3CPQ6ZMV5 832 aa20.61■□□□□ 0.89
CHL1-209ENST00000461289 NCBP3Q53F19 620 aaKnown RBP20.29■□□□□ 0.84
CHL1-209ENST00000461289 SCAF1Q9H7N4 1312 aaKnown RBP20.22■□□□□ 0.83
CHL1-209ENST00000461289 CNKSR2Q8WXI2 1034 aa19.94■□□□□ 0.78
CHL1-209ENST00000461289 NPM3O75607 178 aaKnown RBP19.87■□□□□ 0.77
CHL1-209ENST00000461289 MAPK8IP2Q13387 824 aaPredicted RBP19.79■□□□□ 0.76
CHL1-209ENST00000461289 SLC4A1APQ9BWU0 796 aaKnown RBP19.78■□□□□ 0.76
CHL1-209ENST00000461289 EHMT2Q96KQ7 1210 aa19.75■□□□□ 0.75
CHL1-209ENST00000461289 DMRT2Q9Y5R5 561 aa19.45■□□□□ 0.7
CHL1-209ENST00000461289 RNF216Q9NWF9 866 aaPredicted RBP19.42■□□□□ 0.7
CHL1-209ENST00000461289 CSRNP3Q8WYN3 585 aa19.19■□□□□ 0.66
CHL1-209ENST00000461289 HOXD11P31277 338 aaPredicted RBP19.18■□□□□ 0.66
CHL1-209ENST00000461289 DNAJC5BQ9UF47 199 aa19.12■□□□□ 0.65
CHL1-209ENST00000461289 ZBTB22O15209 634 aa18.91■□□□□ 0.62
CHL1-209ENST00000461289 FOXD4L1Q9NU39 408 aa18.89■□□□□ 0.61
CHL1-209ENST00000461289 DCAF8L1A6NGE4 600 aa18.76■□□□□ 0.59
CHL1-209ENST00000461289 SLC4A2P04920 1241 aa18.61■□□□□ 0.57
CHL1-209ENST00000461289 CACNB1Q02641 598 aaPredicted RBP18.61■□□□□ 0.57
CHL1-209ENST00000461289 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.44■□□□□ 0.54
CHL1-209ENST00000461289 MYCNP04198 464 aaPredicted RBP18.41■□□□□ 0.54
CHL1-209ENST00000461289 ATXN8OSP0DMR3 200 aa18.16■□□□□ 0.5
CHL1-209ENST00000461289 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.1■□□□□ 0.49
CHL1-209ENST00000461289 HNRNPUL2Q1KMD3 747 aaKnown RBP18.1■□□□□ 0.49
CHL1-209ENST00000461289 RNF39Q9H2S5 420 aa18.1■□□□□ 0.49
CHL1-209ENST00000461289 U3KPZ7 1027 aaPredicted RBP18.07■□□□□ 0.48
CHL1-209ENST00000461289 SAMD1Q6SPF0 538 aaPredicted RBP18.04■□□□□ 0.48
CHL1-209ENST00000461289 APLP2Q06481 763 aa17.86■□□□□ 0.45
CHL1-209ENST00000461289 C1QBPQ07021 282 aaKnown RBP17.81■□□□□ 0.44
CHL1-209ENST00000461289 ATF5Q9Y2D1 282 aaPredicted RBP17.79■□□□□ 0.44
CHL1-209ENST00000461289 ZNF219Q9P2Y4 722 aaPredicted RBP17.56■□□□□ 0.4
CHL1-209ENST00000461289 TRHP20396 242 aaPredicted RBP17.48■□□□□ 0.39
CHL1-209ENST00000461289 CAPN15O75808 1086 aa17.47■□□□□ 0.39
CHL1-209ENST00000461289 SPINK5Q9NQ38 1064 aaPredicted RBP17.45■□□□□ 0.38
CHL1-209ENST00000461289 FKBP8Q14318 412 aa17.43■□□□□ 0.38
CHL1-209ENST00000461289 POLA2Q14181 598 aa17.24■□□□□ 0.35
CHL1-209ENST00000461289 FBLN2P98095 1184 aa17.19■□□□□ 0.34
CHL1-209ENST00000461289 ABCB7O75027 752 aa17.13■□□□□ 0.33
CHL1-209ENST00000461289 ZBTB12Q9Y330 459 aaPredicted RBP17.05■□□□□ 0.32
CHL1-209ENST00000461289 MKRN4PQ13434 485 aaPredicted RBP17.04■□□□□ 0.32
CHL1-209ENST00000461289 SPDYE4A6NLX3 237 aa16.98■□□□□ 0.31
CHL1-209ENST00000461289 DSG3P32926 999 aa16.95■□□□□ 0.3
CHL1-209ENST00000461289 POTEHQ6S545 545 aa16.88■□□□□ 0.29
CHL1-209ENST00000461289 FBXO3Q9UK99 471 aa16.73■□□□□ 0.27
CHL1-209ENST00000461289 AMER1Q5JTC6 1135 aaPredicted RBP16.67■□□□□ 0.26
CHL1-209ENST00000461289 OSCARQ8IYS5 282 aa16.64■□□□□ 0.25
CHL1-209ENST00000461289 PROM2Q8N271 834 aa16.62■□□□□ 0.25
CHL1-209ENST00000461289 ZNF692Q9BU19 519 aaPredicted RBP16.61■□□□□ 0.25
CHL1-209ENST00000461289 SPDYE2BA6NHP3 402 aa16.58■□□□□ 0.24
CHL1-209ENST00000461289 SPDYE6P0CI01 402 aa16.58■□□□□ 0.24
CHL1-209ENST00000461289 SPDYE2Q495Y8 402 aa16.58■□□□□ 0.24
CHL1-209ENST00000461289 RTN4Q9NQC3 1192 aaKnown RBP16.58■□□□□ 0.24
CHL1-209ENST00000461289 VASPP50552 380 aaPredicted RBP16.43■□□□□ 0.22
CHL1-209ENST00000461289 SSUH2Q9Y2M2 353 aa16.42■□□□□ 0.22
CHL1-209ENST00000461289 PABPN1Q86U42 306 aaKnown RBP eCLIP16.39■□□□□ 0.21
CHL1-209ENST00000461289 STAG3Q9UJ98 1225 aa16.27■□□□□ 0.2
CHL1-209ENST00000461289 RBM42Q9BTD8 480 aaKnown RBP16.25■□□□□ 0.19
CHL1-209ENST00000461289 IFNLR1Q8IU57 520 aaPredicted RBP16.18■□□□□ 0.18
CHL1-209ENST00000461289 KLHL34Q8N239 644 aa16.16■□□□□ 0.18
CHL1-209ENST00000461289 PLCD3Q8N3E9 789 aa16.16■□□□□ 0.18
CHL1-209ENST00000461289 MIER1Q8N108 512 aa16.1■□□□□ 0.17
CHL1-209ENST00000461289 AKT1S1Q96B36 256 aa16.09■□□□□ 0.17
CHL1-209ENST00000461289 PLEKHG5O94827 1062 aa16.08■□□□□ 0.16
CHL1-209ENST00000461289 SPDYE1Q8NFV5 336 aaPredicted RBP16.01■□□□□ 0.15
CHL1-209ENST00000461289 SPOCK2Q92563 424 aa16■□□□□ 0.15
CHL1-209ENST00000461289 CLEC11AQ9Y240 323 aa15.96■□□□□ 0.15
CHL1-209ENST00000461289 ZBTB47Q9UFB7 747 aaPredicted RBP15.95■□□□□ 0.14
CHL1-209ENST00000461289 REM2Q8IYK8 340 aaPredicted RBP15.92■□□□□ 0.14
CHL1-209ENST00000461289 CHRDL2Q6WN34 429 aa15.89■□□□□ 0.13
CHL1-209ENST00000461289 PRR29P0C7W0 189 aa15.86■□□□□ 0.13
CHL1-209ENST00000461289 DCAF8L2P0C7V8 631 aa15.85■□□□□ 0.13
CHL1-209ENST00000461289 PKD2Q13563 968 aa15.79■□□□□ 0.12
CHL1-209ENST00000461289 SLC24A1O60721 1099 aa15.76■□□□□ 0.11
CHL1-209ENST00000461289 ECM2O94769 699 aaPredicted RBP15.74■□□□□ 0.11
CHL1-209ENST00000461289 CIZ1Q9ULV3 898 aaPredicted RBP15.74■□□□□ 0.11
CHL1-209ENST00000461289 PITPNM1O00562 1244 aa15.72■□□□□ 0.11
CHL1-209ENST00000461289 CREBZFQ9NS37 354 aa15.65■□□□□ 0.1
CHL1-209ENST00000461289 GSE1Q14687 1217 aa15.57■□□□□ 0.08
CHL1-209ENST00000461289 SP7Q8TDD2 431 aaPredicted RBP15.56■□□□□ 0.08
CHL1-209ENST00000461289 TRIM41Q8WV44 630 aa15.55■□□□□ 0.08
CHL1-209ENST00000461289 DCAF8Q5TAQ9 597 aa15.54■□□□□ 0.08
CHL1-209ENST00000461289 NPM1P06748 294 aaKnown RBP eCLIP15.53■□□□□ 0.08
CHL1-209ENST00000461289 NUBP1P53384 320 aa15.52■□□□□ 0.08
CHL1-209ENST00000461289 FAM212AQ96EL1 285 aa15.52■□□□□ 0.08
CHL1-209ENST00000461289 RGL2O15211 777 aa15.49■□□□□ 0.07
CHL1-209ENST00000461289 MNX1P50219 401 aaPredicted RBP15.48■□□□□ 0.07
CHL1-209ENST00000461289 CHADLQ6NUI6 762 aa15.45■□□□□ 0.06
CHL1-209ENST00000461289 RASEFQ8IZ41 740 aa15.39■□□□□ 0.05
CHL1-209ENST00000461289 PIP4P2Q8N4L2 257 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms