RNA–Protein interactions for RNA: ENST00000461214.1

COL5A3-202, Transcript of collagen type V alpha 3 chain, humanhuman

TSL 3

Gene COL5A3, Length 828 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-202ENST00000461214 ABCC6O95255 1503 aa19.7■□□□□ 0.74
COL5A3-202ENST00000461214 RGPD1P0DJD0 1748 aa19.68■□□□□ 0.74
COL5A3-202ENST00000461214 RGPD5Q99666 1765 aa19.68■□□□□ 0.74
COL5A3-202ENST00000461214 AMER1Q5JTC6 1135 aaPredicted RBP19.68■□□□□ 0.74
COL5A3-202ENST00000461214 PAK3O75914 559 aaPredicted RBP19.67■□□□□ 0.74
COL5A3-202ENST00000461214 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.67■□□□□ 0.74
COL5A3-202ENST00000461214 FAM208AQ9UK61 1670 aaKnown RBP19.67■□□□□ 0.74
COL5A3-202ENST00000461214 NWD2Q9ULI1 1742 aa19.67■□□□□ 0.74
COL5A3-202ENST00000461214 FAM83GA6ND36 823 aa19.66■□□□□ 0.74
COL5A3-202ENST00000461214 USP19O94966 1318 aa19.66■□□□□ 0.74
COL5A3-202ENST00000461214 COL14A1Q05707 1796 aaKnown RBP19.65■□□□□ 0.74
COL5A3-202ENST00000461214 FYB1O15117 783 aa19.65■□□□□ 0.74
COL5A3-202ENST00000461214 ABTB2Q8N961 1025 aa19.65■□□□□ 0.74
COL5A3-202ENST00000461214 COL18A1P39060 1754 aa19.65■□□□□ 0.74
COL5A3-202ENST00000461214 NME9Q86XW9 330 aa19.64■□□□□ 0.73
COL5A3-202ENST00000461214 PARD3Q8TEW0 1356 aa19.64■□□□□ 0.73
COL5A3-202ENST00000461214 PEAK1Q9H792 1746 aa19.63■□□□□ 0.73
COL5A3-202ENST00000461214 LMO7Q8WWI1 1683 aa19.63■□□□□ 0.73
COL5A3-202ENST00000461214 DCAF8L1A6NGE4 600 aa19.63■□□□□ 0.73
COL5A3-202ENST00000461214 NLRP13Q86W25 1043 aa19.63■□□□□ 0.73
COL5A3-202ENST00000461214 BTG4Q9NY30 223 aa19.63■□□□□ 0.73
COL5A3-202ENST00000461214 PPP1R1BQ9UD71 204 aaPredicted RBP19.63■□□□□ 0.73
COL5A3-202ENST00000461214 COG3Q96JB2 828 aa19.62■□□□□ 0.73
COL5A3-202ENST00000461214 SMG6Q86US8 1419 aaKnown RBP19.61■□□□□ 0.73
COL5A3-202ENST00000461214 TRIM37O94972 964 aa19.61■□□□□ 0.73
COL5A3-202ENST00000461214 TNS1Q9HBL0 1735 aaKnown RBP19.6■□□□□ 0.73
COL5A3-202ENST00000461214 NLRP6P59044 892 aa19.6■□□□□ 0.73
COL5A3-202ENST00000461214 CAMKK2Q96RR4 588 aa19.6■□□□□ 0.73
COL5A3-202ENST00000461214 GGNBP2Q9H3C7 697 aa19.6■□□□□ 0.73
COL5A3-202ENST00000461214 NRAPQ86VF7 1730 aa19.59■□□□□ 0.73
COL5A3-202ENST00000461214 AATKQ6ZMQ8 1374 aa19.59■□□□□ 0.73
COL5A3-202ENST00000461214 DISP2A7MBM2 1401 aa19.59■□□□□ 0.73
COL5A3-202ENST00000461214 APBA3O96018 575 aa19.58■□□□□ 0.72
COL5A3-202ENST00000461214 CC2D1BQ5T0F9 858 aaKnown RBP19.57■□□□□ 0.72
COL5A3-202ENST00000461214 KCNH5Q8NCM2 988 aa19.57■□□□□ 0.72
COL5A3-202ENST00000461214 RTL1A6NKG5 1358 aa19.56■□□□□ 0.72
COL5A3-202ENST00000461214 CPDO75976 1380 aa19.56■□□□□ 0.72
COL5A3-202ENST00000461214 KIF24Q5T7B8 1368 aa19.56■□□□□ 0.72
COL5A3-202ENST00000461214 WNK3Q9BYP7 1800 aa19.55■□□□□ 0.72
COL5A3-202ENST00000461214 RALBP1Q15311 655 aa19.55■□□□□ 0.72
COL5A3-202ENST00000461214 MORC1Q86VD1 984 aa19.55■□□□□ 0.72
COL5A3-202ENST00000461214 CAMTA1Q9Y6Y1 1673 aa19.55■□□□□ 0.72
COL5A3-202ENST00000461214 RGPD2P0DJD1 1756 aa19.55■□□□□ 0.72
COL5A3-202ENST00000461214 SENP3-EIF4A1A0A087X0R7 540 aa19.54■□□□□ 0.72
COL5A3-202ENST00000461214 NUTM2GQ5VZR2 741 aa19.54■□□□□ 0.72
COL5A3-202ENST00000461214 DIEXFQ68CQ4 756 aaKnown RBP19.54■□□□□ 0.72
COL5A3-202ENST00000461214 SPATA31A5Q5VU36 1347 aa19.53■□□□□ 0.72
COL5A3-202ENST00000461214 SPATA31A7Q8IWB4 1347 aa19.53■□□□□ 0.72
COL5A3-202ENST00000461214 NBPF14Q5TI25 921 aa19.53■□□□□ 0.72
COL5A3-202ENST00000461214 SPON1Q9HCB6 807 aa19.53■□□□□ 0.72
COL5A3-202ENST00000461214 ANP32CO43423 234 aa19.52■□□□□ 0.72
COL5A3-202ENST00000461214 PRKRIP1Q9H875 184 aaPredicted RBP19.52■□□□□ 0.72
COL5A3-202ENST00000461214 GCP02774 474 aa19.51■□□□□ 0.71
COL5A3-202ENST00000461214 FAM196AQ6ZSG2 479 aa19.51■□□□□ 0.71
COL5A3-202ENST00000461214 MYBBP1AQ9BQG0 1328 aaKnown RBP19.51■□□□□ 0.71
COL5A3-202ENST00000461214 THSD7AQ9UPZ6 1657 aa19.49■□□□□ 0.71
COL5A3-202ENST00000461214 FLT4P35916 1363 aa19.49■□□□□ 0.71
COL5A3-202ENST00000461214 KCNQ2O43526 872 aa19.49■□□□□ 0.71
COL5A3-202ENST00000461214 COL3A1P02461 1466 aaPredicted RBP19.48■□□□□ 0.71
COL5A3-202ENST00000461214 ZNF784Q8NCA9 323 aaPredicted RBP19.48■□□□□ 0.71
COL5A3-202ENST00000461214 KIAA0232Q92628 1395 aa19.47■□□□□ 0.71
COL5A3-202ENST00000461214 IFFO2Q5TF58 517 aa19.47■□□□□ 0.71
COL5A3-202ENST00000461214 NUP188Q5SRE5 1749 aa19.46■□□□□ 0.71
COL5A3-202ENST00000461214 STRN4Q9NRL3 753 aa19.46■□□□□ 0.71
COL5A3-202ENST00000461214 USP35Q9P2H5 1018 aa19.46■□□□□ 0.71
COL5A3-202ENST00000461214 MAP3K19Q56UN5 1328 aa19.46■□□□□ 0.71
COL5A3-202ENST00000461214 PPP2R1AP30153 589 aa19.45■□□□□ 0.7
COL5A3-202ENST00000461214 ARHGEF25Q86VW2 580 aa19.45■□□□□ 0.7
COL5A3-202ENST00000461214 PRDM11Q9NQV5 511 aa19.45■□□□□ 0.7
COL5A3-202ENST00000461214 RREB1Q92766 1687 aa19.44■□□□□ 0.7
COL5A3-202ENST00000461214 TNNT2P45379 298 aaPredicted RBP19.44■□□□□ 0.7
COL5A3-202ENST00000461214 CNGB1Q14028 1251 aaPredicted RBP19.44■□□□□ 0.7
COL5A3-202ENST00000461214 PARP4Q9UKK3 1724 aaKnown RBP19.44■□□□□ 0.7
COL5A3-202ENST00000461214 INSRP06213 1382 aa19.44■□□□□ 0.7
COL5A3-202ENST00000461214 COL5A2P05997 1499 aaPredicted RBP19.43■□□□□ 0.7
COL5A3-202ENST00000461214 SOX12O15370 315 aa19.43■□□□□ 0.7
COL5A3-202ENST00000461214 PDE3BQ13370 1112 aa19.43■□□□□ 0.7
COL5A3-202ENST00000461214 POLKQ9UBT6 870 aa19.43■□□□□ 0.7
COL5A3-202ENST00000461214 SPATA31A1Q5TZJ5 1347 aa19.43■□□□□ 0.7
COL5A3-202ENST00000461214 RRS1Q15050 365 aaKnown RBP19.41■□□□□ 0.7
COL5A3-202ENST00000461214 CHRNA2Q15822 529 aa19.41■□□□□ 0.7
COL5A3-202ENST00000461214 EMILIN1Q9Y6C2 1016 aa19.41■□□□□ 0.7
COL5A3-202ENST00000461214 ZC3H6P61129 1189 aaKnown RBP19.4■□□□□ 0.7
COL5A3-202ENST00000461214 VIRMAQ69YN4 1812 aaKnown RBP19.39■□□□□ 0.7
COL5A3-202ENST00000461214 HOXC9P31274 260 aa19.39■□□□□ 0.69
COL5A3-202ENST00000461214 AMPHP49418 695 aa19.39■□□□□ 0.69
COL5A3-202ENST00000461214 MTHFSP49914 203 aa19.39■□□□□ 0.69
COL5A3-202ENST00000461214 C1QTNF8P60827 252 aa19.39■□□□□ 0.69
COL5A3-202ENST00000461214 IP6K1Q92551 441 aa19.38■□□□□ 0.69
COL5A3-202ENST00000461214 CFAP53Q96M91 514 aa19.38■□□□□ 0.69
COL5A3-202ENST00000461214 FBLN1P23142 703 aa19.37■□□□□ 0.69
COL5A3-202ENST00000461214 PKD1L3Q7Z443 1732 aa19.36■□□□□ 0.69
COL5A3-202ENST00000461214 NCAPD2Q15021 1401 aa19.35■□□□□ 0.69
COL5A3-202ENST00000461214 ERBB3P21860 1342 aa19.35■□□□□ 0.69
COL5A3-202ENST00000461214 EVA1CP58658 441 aa19.35■□□□□ 0.69
COL5A3-202ENST00000461214 PPM1GO15355 546 aaPredicted RBP19.34■□□□□ 0.69
COL5A3-202ENST00000461214 ZBTB7AO95365 584 aa19.34■□□□□ 0.69
COL5A3-202ENST00000461214 ZBTB7CA1YPR0 619 aa19.33■□□□□ 0.68
COL5A3-202ENST00000461214 CCER2I3L3R5 266 aa19.33■□□□□ 0.68
COL5A3-202ENST00000461214 SHANK3Q9BYB0 1731 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms