RNA–Protein interactions for RNA: ENST00000461132.1

SPTLC1-203, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 808 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-203ENST00000461132 ERFEQ4G0M1 354 aa8.21□□□□□ -1.1
SPTLC1-203ENST00000461132 SH3D19Q5HYK7 790 aa8.21□□□□□ -1.1
SPTLC1-203ENST00000461132 LCE2CQ5TA81 110 aa8.21□□□□□ -1.1
SPTLC1-203ENST00000461132 PDXDC2PQ6P474 469 aa8.21□□□□□ -1.1
SPTLC1-203ENST00000461132 KDM4CQ9H3R0 1056 aa8.21□□□□□ -1.1
SPTLC1-203ENST00000461132 AP1G2O75843 785 aa8.2□□□□□ -1.1
SPTLC1-203ENST00000461132 PTK2Q05397 1052 aa8.2□□□□□ -1.1
SPTLC1-203ENST00000461132 DHX9Q08211 1270 aaKnown RBP8.2□□□□□ -1.1
SPTLC1-203ENST00000461132 LRRN4Q8WUT4 740 aa8.2□□□□□ -1.1
SPTLC1-203ENST00000461132 ZC3H4Q9UPT8 1303 aaKnown RBP8.2□□□□□ -1.1
SPTLC1-203ENST00000461132 NR6A1Q15406 480 aa8.18□□□□□ -1.1
SPTLC1-203ENST00000461132 KCTD15Q96SI1 283 aaPredicted RBP8.18□□□□□ -1.1
SPTLC1-203ENST00000461132 GPBP1L1Q9HC44 474 aaPredicted RBP8.18□□□□□ -1.1
SPTLC1-203ENST00000461132 ERBB4Q15303 1308 aa8.18□□□□□ -1.1
SPTLC1-203ENST00000461132 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.17□□□□□ -1.1
SPTLC1-203ENST00000461132 PPP1R26Q5T8A7 1209 aaPredicted RBP8.17□□□□□ -1.1
SPTLC1-203ENST00000461132 TTLL8A6PVC2 850 aa8.16□□□□□ -1.1
SPTLC1-203ENST00000461132 SOS2Q07890 1332 aaPredicted RBP8.16□□□□□ -1.1
SPTLC1-203ENST00000461132 FAM117AQ9C073 453 aa8.16□□□□□ -1.1
SPTLC1-203ENST00000461132 NBPF20Q3BBV1 942 aa8.15□□□□□ -1.1
SPTLC1-203ENST00000461132 PROCA1Q8NCQ7 364 aaPredicted RBP8.15□□□□□ -1.1
SPTLC1-203ENST00000461132 TRIM52Q96A61 297 aa8.15□□□□□ -1.1
SPTLC1-203ENST00000461132 GPSM3Q9Y4H4 160 aa8.15□□□□□ -1.1
SPTLC1-203ENST00000461132 PPFIA3O75145 1194 aa8.14□□□□□ -1.11
SPTLC1-203ENST00000461132 PPP2R2DQ66LE6 453 aa8.14□□□□□ -1.11
SPTLC1-203ENST00000461132 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.14□□□□□ -1.11
SPTLC1-203ENST00000461132 DNMT3LQ9UJW3 386 aa8.14□□□□□ -1.11
SPTLC1-203ENST00000461132 VSIG8P0DPA2 414 aa8.13□□□□□ -1.11
SPTLC1-203ENST00000461132 DZIP3Q86Y13 1208 aaKnown RBP8.13□□□□□ -1.11
SPTLC1-203ENST00000461132 FIGNL2A6NMB9 653 aa8.12□□□□□ -1.11
SPTLC1-203ENST00000461132 RAB15P59190 212 aa8.12□□□□□ -1.11
SPTLC1-203ENST00000461132 CBLBQ13191 982 aa8.12□□□□□ -1.11
SPTLC1-203ENST00000461132 ADAM32Q8TC27 787 aa8.12□□□□□ -1.11
SPTLC1-203ENST00000461132 USP17L8P0C7I0 530 aa8.11□□□□□ -1.11
SPTLC1-203ENST00000461132 Q6ZVU0 165 aa8.11□□□□□ -1.11
SPTLC1-203ENST00000461132 PCMTD1Q96MG8 357 aaPredicted RBP8.11□□□□□ -1.11
SPTLC1-203ENST00000461132 RELBQ01201 579 aa8.1□□□□□ -1.11
SPTLC1-203ENST00000461132 INTS6LQ5JSJ4 861 aaKnown RBP8.1□□□□□ -1.11
SPTLC1-203ENST00000461132 POLMQ9NP87 494 aaPredicted RBP8.1□□□□□ -1.11
SPTLC1-203ENST00000461132 SPINT1O43278 529 aa8.09□□□□□ -1.11
SPTLC1-203ENST00000461132 PTSQ03393 145 aa8.09□□□□□ -1.11
SPTLC1-203ENST00000461132 RFC5P40937 340 aa8.08□□□□□ -1.12
SPTLC1-203ENST00000461132 AGBL1Q96MI9 1066 aa8.07□□□□□ -1.12
SPTLC1-203ENST00000461132 TMEM259Q4ZIN3 620 aa8.06□□□□□ -1.12
SPTLC1-203ENST00000461132 FBXO31Q5XUX0 539 aaPredicted RBP8.06□□□□□ -1.12
SPTLC1-203ENST00000461132 CCDC155Q8N6L0 562 aa8.06□□□□□ -1.12
SPTLC1-203ENST00000461132 HMX1Q9NP08 348 aaPredicted RBP8.06□□□□□ -1.12
SPTLC1-203ENST00000461132 CDC14CA4D256 554 aa8.05□□□□□ -1.12
SPTLC1-203ENST00000461132 EPS8L1Q8TE68 723 aa8.05□□□□□ -1.12
SPTLC1-203ENST00000461132 INSM2Q96T92 566 aaPredicted RBP8.05□□□□□ -1.12
SPTLC1-203ENST00000461132 ZNF395Q9H8N7 513 aaPredicted RBP8.05□□□□□ -1.12
SPTLC1-203ENST00000461132 TMPRSS4Q9NRS4 437 aa8.05□□□□□ -1.12
SPTLC1-203ENST00000461132 LORP23490 312 aaPredicted RBP8.04□□□□□ -1.12
SPTLC1-203ENST00000461132 NEUROD2Q15784 382 aa8.04□□□□□ -1.12
SPTLC1-203ENST00000461132 ZNF784Q8NCA9 323 aaPredicted RBP8.04□□□□□ -1.12
SPTLC1-203ENST00000461132 CNTNAP3BQ96NU0 1288 aa8.04□□□□□ -1.12
SPTLC1-203ENST00000461132 CNTNAP3Q9BZ76 1288 aa8.04□□□□□ -1.12
SPTLC1-203ENST00000461132 ADH1AP07327 375 aa8.03□□□□□ -1.12
SPTLC1-203ENST00000461132 CTSOP43234 321 aaPredicted RBP8.03□□□□□ -1.12
SPTLC1-203ENST00000461132 SEPT12Q8IYM1 358 aa8.03□□□□□ -1.12
SPTLC1-203ENST00000461132 OCSTAMPQ9BR26 566 aa8.03□□□□□ -1.12
SPTLC1-203ENST00000461132 GOPCQ9HD26 462 aa8.03□□□□□ -1.12
SPTLC1-203ENST00000461132 ERVH48-1M5A8F1 160 aa8.02□□□□□ -1.13
SPTLC1-203ENST00000461132 SV2AQ7L0J3 742 aa8.02□□□□□ -1.13
SPTLC1-203ENST00000461132 ESF1Q9H501 851 aaKnown RBP8.02□□□□□ -1.13
SPTLC1-203ENST00000461132 PCDHB9Q9Y5E1 797 aa8.02□□□□□ -1.13
SPTLC1-203ENST00000461132 ZBBXA8MT70 800 aa8.01□□□□□ -1.13
SPTLC1-203ENST00000461132 ITGA6P23229 1130 aa8.01□□□□□ -1.13
SPTLC1-203ENST00000461132 ZNF592Q92610 1267 aa8.01□□□□□ -1.13
SPTLC1-203ENST00000461132 COL25A1Q9BXS0 654 aaPredicted RBP8.01□□□□□ -1.13
SPTLC1-203ENST00000461132 ZNF330Q9Y3S2 320 aaPredicted RBP8.01□□□□□ -1.13
SPTLC1-203ENST00000461132 SLC35F4A4IF30 521 aa8□□□□□ -1.13
SPTLC1-203ENST00000461132 RNF225M0QZC1 329 aaPredicted RBP8□□□□□ -1.13
SPTLC1-203ENST00000461132 PTGIRP43119 386 aa8□□□□□ -1.13
SPTLC1-203ENST00000461132 LYSMD3Q7Z3D4 306 aa8□□□□□ -1.13
SPTLC1-203ENST00000461132 IL27Q8NEV9 243 aa8□□□□□ -1.13
SPTLC1-203ENST00000461132 RNF217Q8TC41 542 aa8□□□□□ -1.13
SPTLC1-203ENST00000461132 NANOS1Q8WY41 292 aaKnown RBP8□□□□□ -1.13
SPTLC1-203ENST00000461132 CYLDQ9NQC7 956 aa8□□□□□ -1.13
SPTLC1-203ENST00000461132 RNF20Q5VTR2 975 aa7.99□□□□□ -1.13
SPTLC1-203ENST00000461132 CCDC125Q86Z20 511 aa7.99□□□□□ -1.13
SPTLC1-203ENST00000461132 VWA5B2Q8N398 1253 aa7.99□□□□□ -1.13
SPTLC1-203ENST00000461132 SVOPQ8N4V2 548 aa7.99□□□□□ -1.13
SPTLC1-203ENST00000461132 ATP5J2-PTCD1G3V325 749 aa7.98□□□□□ -1.13
SPTLC1-203ENST00000461132 APBB1O00213 710 aa7.98□□□□□ -1.13
SPTLC1-203ENST00000461132 TPRNQ4KMQ1 711 aa7.98□□□□□ -1.13
SPTLC1-203ENST00000461132 GPR161Q8N6U8 529 aaKnown RBP7.98□□□□□ -1.13
SPTLC1-203ENST00000461132 ESPNB1AK53 854 aa7.97□□□□□ -1.13
SPTLC1-203ENST00000461132 MCCD1P59942 119 aaPredicted RBP7.97□□□□□ -1.13
SPTLC1-203ENST00000461132 MEN1O00255 615 aa7.96□□□□□ -1.14
SPTLC1-203ENST00000461132 LILRA1O75019 489 aa7.96□□□□□ -1.14
SPTLC1-203ENST00000461132 ADD1P35611 737 aaKnown RBP7.96□□□□□ -1.14
SPTLC1-203ENST00000461132 PRICKLE2Q7Z3G6 844 aa7.96□□□□□ -1.14
SPTLC1-203ENST00000461132 TRIM34Q9BYJ4 488 aa7.96□□□□□ -1.14
SPTLC1-203ENST00000461132 GIGYF1O75420 1035 aaPredicted RBP7.95□□□□□ -1.14
SPTLC1-203ENST00000461132 FOXR1Q6PIV2 292 aa7.95□□□□□ -1.14
SPTLC1-203ENST00000461132 NLRP3Q96P20 1036 aa7.95□□□□□ -1.14
SPTLC1-203ENST00000461132 FBXO45P0C2W1 286 aa7.94□□□□□ -1.14
SPTLC1-203ENST00000461132 KRT76Q01546 638 aa7.94□□□□□ -1.14
SPTLC1-203ENST00000461132 MAP3K10Q02779 954 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms