RNA–Protein interactions for RNA: ENST00000461043.6

ERGIC3-211, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-211ENST00000461043 ANKRD26Q9UPS8 1709 aa16.7■□□□□ 0.26
ERGIC3-211ENST00000461043 LTN1O94822 1766 aa16.69■□□□□ 0.26
ERGIC3-211ENST00000461043 EP400Q96L91 3159 aa16.69■□□□□ 0.26
ERGIC3-211ENST00000461043 AMER1Q5JTC6 1135 aaPredicted RBP16.69■□□□□ 0.26
ERGIC3-211ENST00000461043 RGS12O14924 1447 aa16.68■□□□□ 0.26
ERGIC3-211ENST00000461043 SPATA31A5Q5VU36 1347 aa16.68■□□□□ 0.26
ERGIC3-211ENST00000461043 SPATA31A7Q8IWB4 1347 aa16.68■□□□□ 0.26
ERGIC3-211ENST00000461043 FBLN1P23142 703 aa16.67■□□□□ 0.26
ERGIC3-211ENST00000461043 MAP3K19Q56UN5 1328 aa16.67■□□□□ 0.26
ERGIC3-211ENST00000461043 KNSTRNQ9Y448 316 aa16.66■□□□□ 0.26
ERGIC3-211ENST00000461043 RTL1A6NKG5 1358 aa16.65■□□□□ 0.26
ERGIC3-211ENST00000461043 BLMP54132 1417 aaPredicted RBP16.65■□□□□ 0.26
ERGIC3-211ENST00000461043 ZBTB7CA1YPR0 619 aa16.65■□□□□ 0.26
ERGIC3-211ENST00000461043 ONECUT3O60422 494 aaPredicted RBP16.65■□□□□ 0.26
ERGIC3-211ENST00000461043 LARP1Q6PKG0 1096 aaKnown RBP16.65■□□□□ 0.26
ERGIC3-211ENST00000461043 SPATA31A1Q5TZJ5 1347 aa16.65■□□□□ 0.26
ERGIC3-211ENST00000461043 NPC1L1Q9UHC9 1359 aa16.64■□□□□ 0.26
ERGIC3-211ENST00000461043 IP6K1Q92551 441 aa16.64■□□□□ 0.25
ERGIC3-211ENST00000461043 STRN4Q9NRL3 753 aa16.64■□□□□ 0.25
ERGIC3-211ENST00000461043 PEAK1Q9H792 1746 aa16.64■□□□□ 0.25
ERGIC3-211ENST00000461043 WDR17Q8IZU2 1322 aa16.64■□□□□ 0.25
ERGIC3-211ENST00000461043 RGPD5Q99666 1765 aa16.64■□□□□ 0.25
ERGIC3-211ENST00000461043 KIF24Q5T7B8 1368 aa16.64■□□□□ 0.25
ERGIC3-211ENST00000461043 CRB1P82279 1406 aa16.63■□□□□ 0.25
ERGIC3-211ENST00000461043 RRS1Q15050 365 aaKnown RBP16.63■□□□□ 0.25
ERGIC3-211ENST00000461043 ERBB3P21860 1342 aa16.63■□□□□ 0.25
ERGIC3-211ENST00000461043 HOXC9P31274 260 aa16.62■□□□□ 0.25
ERGIC3-211ENST00000461043 EVA1CP58658 441 aa16.62■□□□□ 0.25
ERGIC3-211ENST00000461043 THSD7AQ9UPZ6 1657 aa16.62■□□□□ 0.25
ERGIC3-211ENST00000461043 SMG6Q86US8 1419 aaKnown RBP16.62■□□□□ 0.25
ERGIC3-211ENST00000461043 CCDC9Q9Y3X0 531 aaKnown RBP16.61■□□□□ 0.25
ERGIC3-211ENST00000461043 FLT4P35916 1363 aa16.6■□□□□ 0.25
ERGIC3-211ENST00000461043 BARGINQ6ZT62 677 aa16.59■□□□□ 0.25
ERGIC3-211ENST00000461043 ANKRD24Q8TF21 1146 aa16.59■□□□□ 0.25
ERGIC3-211ENST00000461043 POLKQ9UBT6 870 aa16.59■□□□□ 0.25
ERGIC3-211ENST00000461043 THRAP3Q9Y2W1 955 aaKnown RBP16.59■□□□□ 0.25
ERGIC3-211ENST00000461043 EMILIN1Q9Y6C2 1016 aa16.59■□□□□ 0.25
ERGIC3-211ENST00000461043 INSRP06213 1382 aa16.59■□□□□ 0.25
ERGIC3-211ENST00000461043 AMPHP49418 695 aa16.58■□□□□ 0.24
ERGIC3-211ENST00000461043 FAM98CQ17RN3 349 aaKnown RBP16.58■□□□□ 0.24
ERGIC3-211ENST00000461043 MORC1Q86VD1 984 aa16.58■□□□□ 0.24
ERGIC3-211ENST00000461043 TCP11L2Q8N4U5 519 aa16.58■□□□□ 0.24
ERGIC3-211ENST00000461043 CARD10Q9BWT7 1032 aa16.58■□□□□ 0.24
ERGIC3-211ENST00000461043 FAM208AQ9UK61 1670 aaKnown RBP16.57■□□□□ 0.24
ERGIC3-211ENST00000461043 HSP90AB2PQ58FF8 381 aa16.57■□□□□ 0.24
ERGIC3-211ENST00000461043 TOM1L2Q6ZVM7 507 aa16.57■□□□□ 0.24
ERGIC3-211ENST00000461043 SEPT12Q8IYM1 358 aa16.57■□□□□ 0.24
ERGIC3-211ENST00000461043 DISP2A7MBM2 1401 aa16.56■□□□□ 0.24
ERGIC3-211ENST00000461043 MAP2P11137 1827 aaKnown RBP16.55■□□□□ 0.24
ERGIC3-211ENST00000461043 WNK3Q9BYP7 1800 aa16.55■□□□□ 0.24
ERGIC3-211ENST00000461043 CSB-PGBD3P0DP91 1061 aa16.55■□□□□ 0.24
ERGIC3-211ENST00000461043 TNNT2P45379 298 aaPredicted RBP16.55■□□□□ 0.24
ERGIC3-211ENST00000461043 CC2D1BQ5T0F9 858 aaKnown RBP16.55■□□□□ 0.24
ERGIC3-211ENST00000461043 USP35Q9P2H5 1018 aa16.55■□□□□ 0.24
ERGIC3-211ENST00000461043 PARP4Q9UKK3 1724 aaKnown RBP16.54■□□□□ 0.24
ERGIC3-211ENST00000461043 BRWD3Q6RI45 1802 aa16.54■□□□□ 0.24
ERGIC3-211ENST00000461043 SOCS7O14512 581 aa16.53■□□□□ 0.24
ERGIC3-211ENST00000461043 NCAPD2Q15021 1401 aa16.53■□□□□ 0.24
ERGIC3-211ENST00000461043 LTV1Q96GA3 475 aaPredicted RBP16.51■□□□□ 0.23
ERGIC3-211ENST00000461043 NLRP2Q9NX02 1062 aa16.51■□□□□ 0.23
ERGIC3-211ENST00000461043 LRRC37A3O60309 1634 aa16.51■□□□□ 0.23
ERGIC3-211ENST00000461043 PPM1GO15355 546 aaPredicted RBP16.5■□□□□ 0.23
ERGIC3-211ENST00000461043 DDX10Q13206 875 aaKnown RBP16.5■□□□□ 0.23
ERGIC3-211ENST00000461043 CDCA7Q9BWT1 371 aaPredicted RBP16.5■□□□□ 0.23
ERGIC3-211ENST00000461043 RGPD2P0DJD1 1756 aa16.49■□□□□ 0.23
ERGIC3-211ENST00000461043 ZNF316A6NFI3 1004 aaPredicted RBP16.49■□□□□ 0.23
ERGIC3-211ENST00000461043 NBPF6Q5VWK0 638 aa16.49■□□□□ 0.23
ERGIC3-211ENST00000461043 KRT27Q7Z3Y8 459 aa16.49■□□□□ 0.23
ERGIC3-211ENST00000461043 NBPF4Q96M43 638 aa16.49■□□□□ 0.23
ERGIC3-211ENST00000461043 EIF4A2Q14240 407 aaKnown RBP16.48■□□□□ 0.23
ERGIC3-211ENST00000461043 PARD3Q8TEW0 1356 aa16.48■□□□□ 0.23
ERGIC3-211ENST00000461043 A0A0G2JS52 829 aa16.47■□□□□ 0.23
ERGIC3-211ENST00000461043 MYT1Q01538 1121 aa16.47■□□□□ 0.23
ERGIC3-211ENST00000461043 TNS2Q63HR2 1409 aa16.46■□□□□ 0.23
ERGIC3-211ENST00000461043 MEGF6O75095 1541 aa16.46■□□□□ 0.23
ERGIC3-211ENST00000461043 MTHFSP49914 203 aa16.46■□□□□ 0.23
ERGIC3-211ENST00000461043 COL3A1P02461 1466 aaPredicted RBP16.46■□□□□ 0.23
ERGIC3-211ENST00000461043 IL2RBP14784 551 aa16.45■□□□□ 0.22
ERGIC3-211ENST00000461043 EYA1Q99502 592 aa16.45■□□□□ 0.22
ERGIC3-211ENST00000461043 RGPD1P0DJD0 1748 aa16.45■□□□□ 0.22
ERGIC3-211ENST00000461043 OVOS2A0A0G2JMS6 1433 aa16.45■□□□□ 0.22
ERGIC3-211ENST00000461043 CNGB1Q14028 1251 aaPredicted RBP16.44■□□□□ 0.22
ERGIC3-211ENST00000461043 DDB1Q16531 1140 aa16.44■□□□□ 0.22
ERGIC3-211ENST00000461043 USHBP1Q8N6Y0 703 aa16.44■□□□□ 0.22
ERGIC3-211ENST00000461043 UPF1Q92900 1129 aaKnown RBP eCLIP16.44■□□□□ 0.22
ERGIC3-211ENST00000461043 IGSF1Q8N6C5 1336 aa16.44■□□□□ 0.22
ERGIC3-211ENST00000461043 PPP2R1AP30153 589 aa16.43■□□□□ 0.22
ERGIC3-211ENST00000461043 IL13P35225 146 aa16.43■□□□□ 0.22
ERGIC3-211ENST00000461043 BCL9O00512 1426 aa16.43■□□□□ 0.22
ERGIC3-211ENST00000461043 PDE3BQ13370 1112 aa16.42■□□□□ 0.22
ERGIC3-211ENST00000461043 FAM182BQ5T319 152 aa16.41■□□□□ 0.22
ERGIC3-211ENST00000461043 MARCH10Q8NA82 808 aaPredicted RBP16.41■□□□□ 0.22
ERGIC3-211ENST00000461043 KDRP35968 1356 aa16.4■□□□□ 0.22
ERGIC3-211ENST00000461043 PLEKHG2Q9H7P9 1386 aa16.4■□□□□ 0.22
ERGIC3-211ENST00000461043 SHANK3Q9BYB0 1731 aa16.4■□□□□ 0.22
ERGIC3-211ENST00000461043 EXOC5O00471 708 aa16.4■□□□□ 0.22
ERGIC3-211ENST00000461043 FAM196AQ6ZSG2 479 aa16.39■□□□□ 0.21
ERGIC3-211ENST00000461043 RALBP1Q15311 655 aa16.38■□□□□ 0.21
ERGIC3-211ENST00000461043 RAPGEF4Q8WZA2 1011 aa16.38■□□□□ 0.21
ERGIC3-211ENST00000461043 PKD1L3Q7Z443 1732 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms