RNA–Protein interactions for RNA: ENST00000460940.5

APTX-209, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,874 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-209ENST00000460940 COL18A1P39060 1754 aa15.17■□□□□ 0.02
APTX-209ENST00000460940 RXRBP28702 533 aa15.16■□□□□ 0.02
APTX-209ENST00000460940 COL5A2P05997 1499 aaPredicted RBP15.16■□□□□ 0.02
APTX-209ENST00000460940 RTL1A6NKG5 1358 aa15.15■□□□□ 0.02
APTX-209ENST00000460940 LTN1O94822 1766 aa15.15■□□□□ 0.02
APTX-209ENST00000460940 ZBTB7CA1YPR0 619 aa15.15■□□□□ 0.02
APTX-209ENST00000460940 BLMP54132 1417 aaPredicted RBP15.14■□□□□ 0.01
APTX-209ENST00000460940 GJD4Q96KN9 370 aaPredicted RBP15.14■□□□□ 0.01
APTX-209ENST00000460940 KIF24Q5T7B8 1368 aa15.14■□□□□ 0.01
APTX-209ENST00000460940 NPC1L1Q9UHC9 1359 aa15.14■□□□□ 0.01
APTX-209ENST00000460940 PER1O15534 1290 aaPredicted RBP15.14■□□□□ 0.01
APTX-209ENST00000460940 AMER1Q5JTC6 1135 aaPredicted RBP15.13■□□□□ 0.01
APTX-209ENST00000460940 MAP3K19Q56UN5 1328 aa15.13■□□□□ 0.01
APTX-209ENST00000460940 GLI3P10071 1580 aa15.13■□□□□ 0.01
APTX-209ENST00000460940 EVA1CP58658 441 aa15.12■□□□□ 0.01
APTX-209ENST00000460940 SPATA31A5Q5VU36 1347 aa15.12■□□□□ 0.01
APTX-209ENST00000460940 SPATA31A7Q8IWB4 1347 aa15.12■□□□□ 0.01
APTX-209ENST00000460940 DIEXFQ68CQ4 756 aaKnown RBP15.12■□□□□ 0.01
APTX-209ENST00000460940 STRN4Q9NRL3 753 aa15.12■□□□□ 0.01
APTX-209ENST00000460940 CCDC9Q9Y3X0 531 aaKnown RBP15.12■□□□□ 0.01
APTX-209ENST00000460940 IP6K1Q92551 441 aa15.11■□□□□ 0.01
APTX-209ENST00000460940 AXIN2Q9Y2T1 843 aa15.11■□□□□ 0.01
APTX-209ENST00000460940 WDR17Q8IZU2 1322 aa15.11■□□□□ 0.01
APTX-209ENST00000460940 CRB1P82279 1406 aa15.11■□□□□ 0.01
APTX-209ENST00000460940 ILDR2Q71H61 639 aa15.1■□□□□ 0.01
APTX-209ENST00000460940 RGS12O14924 1447 aa15.1■□□□□ 0.01
APTX-209ENST00000460940 AMPHP49418 695 aa15.1■□□□□ 0.01
APTX-209ENST00000460940 MORC1Q86VD1 984 aa15.1■□□□□ 0.01
APTX-209ENST00000460940 SPATA31A1Q5TZJ5 1347 aa15.1■□□□□ 0.01
APTX-209ENST00000460940 FLT4P35916 1363 aa15.1■□□□□ 0.01
APTX-209ENST00000460940 RRS1Q15050 365 aaKnown RBP15.09■□□□□ 0.01
APTX-209ENST00000460940 LARP1Q6PKG0 1096 aaKnown RBP15.09■□□□□ 0.01
APTX-209ENST00000460940 ERBB3P21860 1342 aa15.09■□□□□ 0.01
APTX-209ENST00000460940 SMG6Q86US8 1419 aaKnown RBP15.08■□□□□ 0.01
APTX-209ENST00000460940 HOXC9P31274 260 aa15.08■□□□□ 0.01
APTX-209ENST00000460940 FAM208AQ9UK61 1670 aaKnown RBP15.08■□□□□ 0
APTX-209ENST00000460940 THRAP3Q9Y2W1 955 aaKnown RBP15.08■□□□□ 0
APTX-209ENST00000460940 INSRP06213 1382 aa15.07■□□□□ 0
APTX-209ENST00000460940 ONECUT3O60422 494 aaPredicted RBP15.07■□□□□ 0
APTX-209ENST00000460940 CSB-PGBD3P0DP91 1061 aa15.07■□□□□ 0
APTX-209ENST00000460940 FBLN1P23142 703 aa15.07■□□□□ 0
APTX-209ENST00000460940 RGPD5Q99666 1765 aa15.07■□□□□ 0
APTX-209ENST00000460940 PEAK1Q9H792 1746 aa15.07■□□□□ 0
APTX-209ENST00000460940 TOM1L2Q6ZVM7 507 aa15.06■□□□□ 0
APTX-209ENST00000460940 TCP11L2Q8N4U5 519 aa15.06■□□□□ 0
APTX-209ENST00000460940 ANKRD24Q8TF21 1146 aa15.06■□□□□ 0
APTX-209ENST00000460940 THSD7AQ9UPZ6 1657 aa15.06■□□□□ 0
APTX-209ENST00000460940 BARGINQ6ZT62 677 aa15.06■□□□□ 0
APTX-209ENST00000460940 CARD10Q9BWT7 1032 aa15.06■□□□□ 0
APTX-209ENST00000460940 TNNT2P45379 298 aaPredicted RBP15.05■□□□□ -0
APTX-209ENST00000460940 POLKQ9UBT6 870 aa15.05■□□□□ -0
APTX-209ENST00000460940 EMILIN1Q9Y6C2 1016 aa15.05■□□□□ -0
APTX-209ENST00000460940 FAM98CQ17RN3 349 aaKnown RBP15.04■□□□□ -0
APTX-209ENST00000460940 CC2D1BQ5T0F9 858 aaKnown RBP15.04■□□□□ -0
APTX-209ENST00000460940 ZNF316A6NFI3 1004 aaPredicted RBP15.03■□□□□ -0
APTX-209ENST00000460940 SEPT12Q8IYM1 358 aa15.03■□□□□ -0
APTX-209ENST00000460940 USP35Q9P2H5 1018 aa15.03■□□□□ -0
APTX-209ENST00000460940 MAP2P11137 1827 aaKnown RBP15.03■□□□□ -0
APTX-209ENST00000460940 CDCA7Q9BWT1 371 aaPredicted RBP15.02■□□□□ -0
APTX-209ENST00000460940 NLRP2Q9NX02 1062 aa15.02■□□□□ -0
APTX-209ENST00000460940 PPM1GO15355 546 aaPredicted RBP15.01□□□□□ -0.01
APTX-209ENST00000460940 HSP90AB2PQ58FF8 381 aa15.01□□□□□ -0.01
APTX-209ENST00000460940 WNK3Q9BYP7 1800 aa15.01□□□□□ -0.01
APTX-209ENST00000460940 DDX10Q13206 875 aaKnown RBP15.01□□□□□ -0.01
APTX-209ENST00000460940 LTV1Q96GA3 475 aaPredicted RBP15.01□□□□□ -0.01
APTX-209ENST00000460940 DISP2A7MBM2 1401 aa15□□□□□ -0.01
APTX-209ENST00000460940 PARP4Q9UKK3 1724 aaKnown RBP15□□□□□ -0.01
APTX-209ENST00000460940 A0A0G2JS52 829 aa15□□□□□ -0.01
APTX-209ENST00000460940 BCL11AQ9H165 835 aa15□□□□□ -0.01
APTX-209ENST00000460940 LRRC37A3O60309 1634 aa14.98□□□□□ -0.01
APTX-209ENST00000460940 PARD3Q8TEW0 1356 aa14.98□□□□□ -0.01
APTX-209ENST00000460940 NCAPD2Q15021 1401 aa14.97□□□□□ -0.01
APTX-209ENST00000460940 KRT27Q7Z3Y8 459 aa14.97□□□□□ -0.01
APTX-209ENST00000460940 BRWD3Q6RI45 1802 aa14.96□□□□□ -0.01
APTX-209ENST00000460940 IL2RBP14784 551 aa14.96□□□□□ -0.01
APTX-209ENST00000460940 TNS2Q63HR2 1409 aa14.96□□□□□ -0.02
APTX-209ENST00000460940 SOCS7O14512 581 aa14.95□□□□□ -0.02
APTX-209ENST00000460940 MTHFSP49914 203 aa14.95□□□□□ -0.02
APTX-209ENST00000460940 CNGB1Q14028 1251 aaPredicted RBP14.95□□□□□ -0.02
APTX-209ENST00000460940 EIF4A2Q14240 407 aaKnown RBP14.95□□□□□ -0.02
APTX-209ENST00000460940 NBPF6Q5VWK0 638 aa14.95□□□□□ -0.02
APTX-209ENST00000460940 NBPF4Q96M43 638 aa14.95□□□□□ -0.02
APTX-209ENST00000460940 DDB1Q16531 1140 aa14.94□□□□□ -0.02
APTX-209ENST00000460940 PLEKHG2Q9H7P9 1386 aa14.94□□□□□ -0.02
APTX-209ENST00000460940 RGPD2P0DJD1 1756 aa14.94□□□□□ -0.02
APTX-209ENST00000460940 PDE3BQ13370 1112 aa14.93□□□□□ -0.02
APTX-209ENST00000460940 RALBP1Q15311 655 aa14.93□□□□□ -0.02
APTX-209ENST00000460940 PPP2R1AP30153 589 aa14.93□□□□□ -0.02
APTX-209ENST00000460940 OVOS2A0A0G2JMS6 1433 aa14.92□□□□□ -0.02
APTX-209ENST00000460940 COL3A1P02461 1466 aaPredicted RBP14.92□□□□□ -0.02
APTX-209ENST00000460940 EYA1Q99502 592 aa14.92□□□□□ -0.02
APTX-209ENST00000460940 IGSF1Q8N6C5 1336 aa14.92□□□□□ -0.02
APTX-209ENST00000460940 MEGF6O75095 1541 aa14.92□□□□□ -0.02
APTX-209ENST00000460940 USHBP1Q8N6Y0 703 aa14.91□□□□□ -0.02
APTX-209ENST00000460940 RAPGEF4Q8WZA2 1011 aa14.91□□□□□ -0.02
APTX-209ENST00000460940 CFAP53Q96M91 514 aa14.91□□□□□ -0.02
APTX-209ENST00000460940 RGPD1P0DJD0 1748 aa14.91□□□□□ -0.02
APTX-209ENST00000460940 EXOC5O00471 708 aa14.91□□□□□ -0.02
APTX-209ENST00000460940 IL13P35225 146 aa14.91□□□□□ -0.02
APTX-209ENST00000460940 ANP32EQ9BTT0 268 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms