RNA–Protein interactions for RNA: ENST00000460308.6

ABCD4-202, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 1 (best)

Gene ABCD4, Length 1,003 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-202ENST00000460308 USP35Q9P2H5 1018 aa29.5■■■□□ 2.31
ABCD4-202ENST00000460308 CGNL1Q0VF96 1302 aa29.49■■■□□ 2.31
ABCD4-202ENST00000460308 FAM98CQ17RN3 349 aaKnown RBP29.49■■■□□ 2.31
ABCD4-202ENST00000460308 AXIN2Q9Y2T1 843 aa29.49■■■□□ 2.31
ABCD4-202ENST00000460308 SPATA31A1Q5TZJ5 1347 aa29.48■■■□□ 2.31
ABCD4-202ENST00000460308 SEPT12Q8IYM1 358 aa29.48■■■□□ 2.31
ABCD4-202ENST00000460308 COL5A2P05997 1499 aaPredicted RBP29.48■■■□□ 2.31
ABCD4-202ENST00000460308 KIF20BQ96Q89 1820 aa29.48■■■□□ 2.31
ABCD4-202ENST00000460308 COL18A1P39060 1754 aa29.47■■■□□ 2.31
ABCD4-202ENST00000460308 ONECUT3O60422 494 aaPredicted RBP29.47■■■□□ 2.31
ABCD4-202ENST00000460308 CSB-PGBD3P0DP91 1061 aa29.46■■■□□ 2.31
ABCD4-202ENST00000460308 TOM1L2Q6ZVM7 507 aa29.45■■■□□ 2.31
ABCD4-202ENST00000460308 LTN1O94822 1766 aa29.44■■■□□ 2.3
ABCD4-202ENST00000460308 TCP11L2Q8N4U5 519 aa29.43■■■□□ 2.3
ABCD4-202ENST00000460308 RGPD5Q99666 1765 aa29.43■■■□□ 2.3
ABCD4-202ENST00000460308 FBLN1P23142 703 aa29.42■■■□□ 2.3
ABCD4-202ENST00000460308 AMPHP49418 695 aa29.42■■■□□ 2.3
ABCD4-202ENST00000460308 CRB1P82279 1406 aa29.42■■■□□ 2.3
ABCD4-202ENST00000460308 ABCC6O95255 1503 aa29.41■■■□□ 2.3
ABCD4-202ENST00000460308 KNSTRNQ9Y448 316 aa29.41■■■□□ 2.3
ABCD4-202ENST00000460308 WDR17Q8IZU2 1322 aa29.41■■■□□ 2.3
ABCD4-202ENST00000460308 CCDC7Q96M83 1385 aa29.4■■■□□ 2.3
ABCD4-202ENST00000460308 IP6K1Q92551 441 aa29.4■■■□□ 2.3
ABCD4-202ENST00000460308 THRAP3Q9Y2W1 955 aaKnown RBP29.4■■■□□ 2.3
ABCD4-202ENST00000460308 ZEB1P37275 1124 aaPredicted RBP29.39■■■□□ 2.3
ABCD4-202ENST00000460308 BARGINQ6ZT62 677 aa29.39■■■□□ 2.3
ABCD4-202ENST00000460308 MAP3K19Q56UN5 1328 aa29.39■■■□□ 2.3
ABCD4-202ENST00000460308 RRS1Q15050 365 aaKnown RBP29.38■■■□□ 2.29
ABCD4-202ENST00000460308 WASHC2AQ641Q2 1341 aa29.38■■■□□ 2.29
ABCD4-202ENST00000460308 KRT27Q7Z3Y8 459 aa29.37■■■□□ 2.29
ABCD4-202ENST00000460308 ANKRD24Q8TF21 1146 aa29.35■■■□□ 2.29
ABCD4-202ENST00000460308 BRWD3Q6RI45 1802 aa29.35■■■□□ 2.29
ABCD4-202ENST00000460308 HOXC9P31274 260 aa29.34■■■□□ 2.29
ABCD4-202ENST00000460308 ERBB3P21860 1342 aa29.34■■■□□ 2.29
ABCD4-202ENST00000460308 BLMP54132 1417 aaPredicted RBP29.34■■■□□ 2.29
ABCD4-202ENST00000460308 UPF1Q92900 1129 aaKnown RBP eCLIP29.33■■■□□ 2.29
ABCD4-202ENST00000460308 LTV1Q96GA3 475 aaPredicted RBP29.33■■■□□ 2.29
ABCD4-202ENST00000460308 CARD10Q9BWT7 1032 aa29.33■■■□□ 2.29
ABCD4-202ENST00000460308 NLRP2Q9NX02 1062 aa29.33■■■□□ 2.29
ABCD4-202ENST00000460308 NSD2O96028 1365 aa29.31■■■□□ 2.28
ABCD4-202ENST00000460308 RTL1A6NKG5 1358 aa29.3■■■□□ 2.28
ABCD4-202ENST00000460308 TNNT2P45379 298 aaPredicted RBP29.3■■■□□ 2.28
ABCD4-202ENST00000460308 THSD7AQ9UPZ6 1657 aa29.29■■■□□ 2.28
ABCD4-202ENST00000460308 MORC1Q86VD1 984 aa29.29■■■□□ 2.28
ABCD4-202ENST00000460308 PPM1GO15355 546 aaPredicted RBP29.28■■■□□ 2.28
ABCD4-202ENST00000460308 PDE3BQ13370 1112 aa29.28■■■□□ 2.28
ABCD4-202ENST00000460308 CDCA7Q9BWT1 371 aaPredicted RBP29.27■■■□□ 2.28
ABCD4-202ENST00000460308 ANKRD26Q9UPS8 1709 aa29.27■■■□□ 2.28
ABCD4-202ENST00000460308 KIF24Q5T7B8 1368 aa29.26■■■□□ 2.27
ABCD4-202ENST00000460308 EMILIN1Q9Y6C2 1016 aa29.25■■■□□ 2.27
ABCD4-202ENST00000460308 FLT4P35916 1363 aa29.25■■■□□ 2.27
ABCD4-202ENST00000460308 PER1O15534 1290 aaPredicted RBP29.24■■■□□ 2.27
ABCD4-202ENST00000460308 MAP2P11137 1827 aaKnown RBP29.24■■■□□ 2.27
ABCD4-202ENST00000460308 HSP90AB2PQ58FF8 381 aa29.23■■■□□ 2.27
ABCD4-202ENST00000460308 AMER1Q5JTC6 1135 aaPredicted RBP29.23■■■□□ 2.27
ABCD4-202ENST00000460308 DDB1Q16531 1140 aa29.22■■■□□ 2.27
ABCD4-202ENST00000460308 SMG6Q86US8 1419 aaKnown RBP29.21■■■□□ 2.27
ABCD4-202ENST00000460308 FAM182BQ5T319 152 aa29.21■■■□□ 2.27
ABCD4-202ENST00000460308 CCDC125Q86Z20 511 aa29.2■■■□□ 2.26
ABCD4-202ENST00000460308 POLKQ9UBT6 870 aa29.2■■■□□ 2.26
ABCD4-202ENST00000460308 INSRP06213 1382 aa29.2■■■□□ 2.26
ABCD4-202ENST00000460308 EXOC5O00471 708 aa29.18■■■□□ 2.26
ABCD4-202ENST00000460308 CC2D1BQ5T0F9 858 aaKnown RBP29.18■■■□□ 2.26
ABCD4-202ENST00000460308 FAM208AQ9UK61 1670 aaKnown RBP29.18■■■□□ 2.26
ABCD4-202ENST00000460308 PARP4Q9UKK3 1724 aaKnown RBP29.17■■■□□ 2.26
ABCD4-202ENST00000460308 IL2RBP14784 551 aa29.17■■■□□ 2.26
ABCD4-202ENST00000460308 FAM196AQ6ZSG2 479 aa29.17■■■□□ 2.26
ABCD4-202ENST00000460308 PEAK1Q9H792 1746 aa29.17■■■□□ 2.26
ABCD4-202ENST00000460308 SF3B2Q13435 895 aaKnown RBP29.16■■■□□ 2.26
ABCD4-202ENST00000460308 CNGB1Q14028 1251 aaPredicted RBP29.15■■■□□ 2.26
ABCD4-202ENST00000460308 WNK3Q9BYP7 1800 aa29.15■■■□□ 2.26
ABCD4-202ENST00000460308 DISP2A7MBM2 1401 aa29.13■■■□□ 2.25
ABCD4-202ENST00000460308 NBPF6Q5VWK0 638 aa29.13■■■□□ 2.25
ABCD4-202ENST00000460308 NBPF4Q96M43 638 aa29.13■■■□□ 2.25
ABCD4-202ENST00000460308 RGPD2P0DJD1 1756 aa29.11■■■□□ 2.25
ABCD4-202ENST00000460308 LRRC37A3O60309 1634 aa29.1■■■□□ 2.25
ABCD4-202ENST00000460308 NPC1L1Q9UHC9 1359 aa29.1■■■□□ 2.25
ABCD4-202ENST00000460308 USHBP1Q8N6Y0 703 aa29.08■■■□□ 2.25
ABCD4-202ENST00000460308 EP400Q96L91 3159 aa29.06■■■□□ 2.24
ABCD4-202ENST00000460308 MARCH10Q8NA82 808 aaPredicted RBP29.06■■■□□ 2.24
ABCD4-202ENST00000460308 RAPGEF4Q8WZA2 1011 aa29.06■■■□□ 2.24
ABCD4-202ENST00000460308 OVOS2A0A0G2JMS6 1433 aa29.05■■■□□ 2.24
ABCD4-202ENST00000460308 TRIM37O94972 964 aa29.05■■■□□ 2.24
ABCD4-202ENST00000460308 TNS2Q63HR2 1409 aa29.04■■■□□ 2.24
ABCD4-202ENST00000460308 EIF4A2Q14240 407 aaKnown RBP29.04■■■□□ 2.24
ABCD4-202ENST00000460308 TATP17735 454 aaPredicted RBP29.03■■■□□ 2.24
ABCD4-202ENST00000460308 MTHFSP49914 203 aa29.02■■■□□ 2.24
ABCD4-202ENST00000460308 BAG6P46379 1132 aa29.01■■■□□ 2.23
ABCD4-202ENST00000460308 EYA1Q99502 592 aa29.01■■■□□ 2.23
ABCD4-202ENST00000460308 DDX54Q8TDD1 881 aaKnown RBP29■■■□□ 2.23
ABCD4-202ENST00000460308 RGPD1P0DJD0 1748 aa29■■■□□ 2.23
ABCD4-202ENST00000460308 DEFB132Q7Z7B7 95 aa28.99■■■□□ 2.23
ABCD4-202ENST00000460308 ZCRB1Q8TBF4 217 aaKnown RBP28.99■■■□□ 2.23
ABCD4-202ENST00000460308 DDX10Q13206 875 aaKnown RBP28.98■■■□□ 2.23
ABCD4-202ENST00000460308 MEGF6O75095 1541 aa28.97■■■□□ 2.23
ABCD4-202ENST00000460308 APBA3O96018 575 aa28.96■■■□□ 2.23
ABCD4-202ENST00000460308 KAT6BQ8WYB5 2073 aa28.94■■■□□ 2.22
ABCD4-202ENST00000460308 BCL9O00512 1426 aa28.94■■■□□ 2.22
ABCD4-202ENST00000460308 EN1Q05925 392 aaPredicted RBP28.91■■■□□ 2.22
ABCD4-202ENST00000460308 BCL11BQ9C0K0 894 aaPredicted RBP28.91■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms