RNA–Protein interactions for RNA: ENST00000460064.1

CCDC50-203, Transcript of coiled-coil domain containing 50, humanhuman

TSL 2

Gene CCDC50, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-203ENST00000460064 PLPP7Q8NBV4 271 aa9.91□□□□□ -0.82
CCDC50-203ENST00000460064 MKRN1Q9UHC7 482 aaKnown RBP9.91□□□□□ -0.82
CCDC50-203ENST00000460064 GIGYF1O75420 1035 aaPredicted RBP9.9□□□□□ -0.82
CCDC50-203ENST00000460064 ANKLE1Q8NAG6 615 aa9.9□□□□□ -0.82
CCDC50-203ENST00000460064 USTQ9Y2C2 406 aa9.9□□□□□ -0.82
CCDC50-203ENST00000460064 LZTS3O60299 673 aaPredicted RBP9.89□□□□□ -0.83
CCDC50-203ENST00000460064 NCOA4Q13772 614 aa9.89□□□□□ -0.83
CCDC50-203ENST00000460064 MAP7D1Q3KQU3 841 aa9.89□□□□□ -0.83
CCDC50-203ENST00000460064 TSGA10IPQ3SY00 556 aa9.89□□□□□ -0.83
CCDC50-203ENST00000460064 PPP1R18Q6NYC8 613 aa9.89□□□□□ -0.83
CCDC50-203ENST00000460064 SLC10A4Q96EP9 437 aa9.89□□□□□ -0.83
CCDC50-203ENST00000460064 CARNS1A5YM72 827 aa9.88□□□□□ -0.83
CCDC50-203ENST00000460064 TRIM32Q13049 653 aa9.87□□□□□ -0.83
CCDC50-203ENST00000460064 EML3Q32P44 896 aa9.87□□□□□ -0.83
CCDC50-203ENST00000460064 RNF20Q5VTR2 975 aa9.87□□□□□ -0.83
CCDC50-203ENST00000460064 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.87□□□□□ -0.83
CCDC50-203ENST00000460064 CHIC2Q9UKJ5 165 aa9.87□□□□□ -0.83
CCDC50-203ENST00000460064 ATP5J2-PTCD1G3V325 749 aa9.86□□□□□ -0.83
CCDC50-203ENST00000460064 PLA2G2CQ5R387 149 aa9.86□□□□□ -0.83
CCDC50-203ENST00000460064 LARP1Q6PKG0 1096 aaKnown RBP9.86□□□□□ -0.83
CCDC50-203ENST00000460064 RASA1P20936 1047 aa9.85□□□□□ -0.83
CCDC50-203ENST00000460064 TRAF7Q6Q0C0 670 aa9.85□□□□□ -0.83
CCDC50-203ENST00000460064 CCDC85AQ96PX6 553 aaPredicted RBP9.85□□□□□ -0.83
CCDC50-203ENST00000460064 DOLKQ9UPQ8 538 aa9.85□□□□□ -0.83
CCDC50-203ENST00000460064 CD2BP2O95400 341 aaKnown RBP9.84□□□□□ -0.83
CCDC50-203ENST00000460064 VARSP26640 1264 aaKnown RBP9.84□□□□□ -0.83
CCDC50-203ENST00000460064 ELOAQ14241 798 aaKnown RBP9.84□□□□□ -0.83
CCDC50-203ENST00000460064 NBPF20Q3BBV1 942 aa9.84□□□□□ -0.83
CCDC50-203ENST00000460064 C1QTNF2Q9BXJ5 285 aa9.84□□□□□ -0.83
CCDC50-203ENST00000460064 CDV3Q9UKY7 258 aaKnown RBP9.84□□□□□ -0.83
CCDC50-203ENST00000460064 NOVA2Q9UNW9 492 aaKnown RBP9.84□□□□□ -0.83
CCDC50-203ENST00000460064 NOD1Q9Y239 953 aa9.84□□□□□ -0.83
CCDC50-203ENST00000460064 FAM196BA6NMK8 535 aa9.83□□□□□ -0.84
CCDC50-203ENST00000460064 RPIAP49247 311 aa9.83□□□□□ -0.84
CCDC50-203ENST00000460064 WNT7BP56706 349 aa9.83□□□□□ -0.84
CCDC50-203ENST00000460064 SKOR1P84550 965 aa9.83□□□□□ -0.84
CCDC50-203ENST00000460064 OXLD1Q5BKU9 147 aa9.83□□□□□ -0.84
CCDC50-203ENST00000460064 TRMT44Q8IYL2 757 aaKnown RBP9.83□□□□□ -0.84
CCDC50-203ENST00000460064 TMEM88BA6NKF7 163 aa9.82□□□□□ -0.84
CCDC50-203ENST00000460064 CRTC2Q53ET0 693 aaPredicted RBP9.82□□□□□ -0.84
CCDC50-203ENST00000460064 USP17L15C9J2P7 530 aa9.81□□□□□ -0.84
CCDC50-203ENST00000460064 USP17L10C9JJH3 530 aa9.81□□□□□ -0.84
CCDC50-203ENST00000460064 USP17L13C9JLJ4 530 aa9.81□□□□□ -0.84
CCDC50-203ENST00000460064 USP17L12C9JPN9 530 aa9.81□□□□□ -0.84
CCDC50-203ENST00000460064 USP17L11C9JVI0 530 aa9.81□□□□□ -0.84
CCDC50-203ENST00000460064 USP17L21D6R901 530 aa9.81□□□□□ -0.84
CCDC50-203ENST00000460064 USP17L18D6R9N7 530 aa9.81□□□□□ -0.84
CCDC50-203ENST00000460064 USP17L22D6RA61 530 aa9.81□□□□□ -0.84
CCDC50-203ENST00000460064 USP17L17D6RBQ6 530 aa9.81□□□□□ -0.84
CCDC50-203ENST00000460064 USP17L19D6RCP7 530 aa9.81□□□□□ -0.84
CCDC50-203ENST00000460064 USP17L20D6RJB6 530 aa9.81□□□□□ -0.84
CCDC50-203ENST00000460064 BRD1O95696 1058 aa9.81□□□□□ -0.84
CCDC50-203ENST00000460064 RAB15P59190 212 aa9.81□□□□□ -0.84
CCDC50-203ENST00000460064 USP17L24Q0WX57 530 aa9.81□□□□□ -0.84
CCDC50-203ENST00000460064 PTK7Q13308 1070 aa9.81□□□□□ -0.84
CCDC50-203ENST00000460064 TRIM50Q86XT4 487 aa9.81□□□□□ -0.84
CCDC50-203ENST00000460064 OGFOD1Q8N543 542 aa9.81□□□□□ -0.84
CCDC50-203ENST00000460064 KCTD15Q96SI1 283 aaPredicted RBP9.81□□□□□ -0.84
CCDC50-203ENST00000460064 ZMIZ1Q9ULJ6 1067 aa9.81□□□□□ -0.84
CCDC50-203ENST00000460064 ESPNB1AK53 854 aa9.8□□□□□ -0.84
CCDC50-203ENST00000460064 ATP1A2P50993 1020 aa9.8□□□□□ -0.84
CCDC50-203ENST00000460064 USP4Q13107 963 aa9.8□□□□□ -0.84
CCDC50-203ENST00000460064 ARID5BQ14865 1188 aa9.8□□□□□ -0.84
CCDC50-203ENST00000460064 TMEM164Q5U3C3 297 aa9.8□□□□□ -0.84
CCDC50-203ENST00000460064 VASH1Q7L8A9 365 aaPredicted RBP9.8□□□□□ -0.84
CCDC50-203ENST00000460064 SEPT12Q8IYM1 358 aa9.8□□□□□ -0.84
CCDC50-203ENST00000460064 EHBP1Q8NDI1 1231 aa9.8□□□□□ -0.84
CCDC50-203ENST00000460064 FAM200AQ8TCP9 573 aa9.8□□□□□ -0.84
CCDC50-203ENST00000460064 CDCA7Q9BWT1 371 aaPredicted RBP9.8□□□□□ -0.84
CCDC50-203ENST00000460064 PCDHB11Q9Y5F2 797 aa9.8□□□□□ -0.84
CCDC50-203ENST00000460064 RC3H1Q5TC82 1133 aaKnown RBP9.79□□□□□ -0.84
CCDC50-203ENST00000460064 CCDC125Q86Z20 511 aa9.79□□□□□ -0.84
CCDC50-203ENST00000460064 STK32AQ8WU08 396 aa9.79□□□□□ -0.84
CCDC50-203ENST00000460064 SIRT1Q96EB6 747 aa9.79□□□□□ -0.84
CCDC50-203ENST00000460064 DNAAF2Q9NVR5 837 aaKnown RBP9.79□□□□□ -0.84
CCDC50-203ENST00000460064 ANKMY2Q8IV38 441 aa9.78□□□□□ -0.84
CCDC50-203ENST00000460064 PATL2C9JE40 543 aaKnown RBP9.77□□□□□ -0.85
CCDC50-203ENST00000460064 CLDN10P78369 228 aa9.77□□□□□ -0.85
CCDC50-203ENST00000460064 LIAT1Q6ZQX7 453 aa9.77□□□□□ -0.85
CCDC50-203ENST00000460064 LARGE2Q8N3Y3 721 aa9.77□□□□□ -0.85
CCDC50-203ENST00000460064 ZNF594Q96JF6 807 aaPredicted RBP9.77□□□□□ -0.85
CCDC50-203ENST00000460064 ZBTB7BO15156 539 aaPredicted RBP9.76□□□□□ -0.85
CCDC50-203ENST00000460064 GTF2IP78347 998 aa9.76□□□□□ -0.85
CCDC50-203ENST00000460064 DPYDQ12882 1025 aa9.76□□□□□ -0.85
CCDC50-203ENST00000460064 GZF1Q9H116 711 aaPredicted RBP9.76□□□□□ -0.85
CCDC50-203ENST00000460064 RBM19Q9Y4C8 960 aaKnown RBP9.76□□□□□ -0.85
CCDC50-203ENST00000460064 KCNA1Q09470 495 aa9.75□□□□□ -0.85
CCDC50-203ENST00000460064 MMRN1Q13201 1228 aa9.75□□□□□ -0.85
CCDC50-203ENST00000460064 ESF1Q9H501 851 aaKnown RBP9.75□□□□□ -0.85
CCDC50-203ENST00000460064 MAP4K5Q9Y4K4 846 aa9.75□□□□□ -0.85
CCDC50-203ENST00000460064 ERVH48-1M5A8F1 160 aa9.74□□□□□ -0.85
CCDC50-203ENST00000460064 SLC19A1P41440 591 aa9.74□□□□□ -0.85
CCDC50-203ENST00000460064 PSME1Q06323 249 aa9.74□□□□□ -0.85
CCDC50-203ENST00000460064 INTS6LQ5JSJ4 861 aaKnown RBP9.74□□□□□ -0.85
CCDC50-203ENST00000460064 MYCP01106 439 aaPredicted RBP9.73□□□□□ -0.85
CCDC50-203ENST00000460064 CCDC102BQ68D86 513 aa9.73□□□□□ -0.85
CCDC50-203ENST00000460064 B4GALNT3Q6L9W6 998 aa9.73□□□□□ -0.85
CCDC50-203ENST00000460064 CDK15Q96Q40 435 aa9.73□□□□□ -0.85
CCDC50-203ENST00000460064 PCDHGA11Q9Y5H2 935 aa9.73□□□□□ -0.85
CCDC50-203ENST00000460064 EMID1Q96A84 441 aaPredicted RBP9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms