RNA–Protein interactions for RNA: ENST00000459860.1

SSNA1-202, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 1 (best)

Gene SSNA1, Length 1,170 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-202ENST00000459860 FAM182BQ5T319 152 aa30.03■■■□□ 2.4
SSNA1-202ENST00000459860 COG3Q96JB2 828 aa30.03■■■□□ 2.4
SSNA1-202ENST00000459860 LTN1O94822 1766 aa30.03■■■□□ 2.4
SSNA1-202ENST00000459860 SPATA31A1Q5TZJ5 1347 aa30.02■■■□□ 2.4
SSNA1-202ENST00000459860 C11orf95C9JLR9 678 aaPredicted RBP30.01■■■□□ 2.39
SSNA1-202ENST00000459860 BAG6P46379 1132 aa30.01■■■□□ 2.39
SSNA1-202ENST00000459860 THSD7AQ9UPZ6 1657 aa30■■■□□ 2.39
SSNA1-202ENST00000459860 AATKQ6ZMQ8 1374 aa30■■■□□ 2.39
SSNA1-202ENST00000459860 KIF7Q2M1P5 1343 aa29.99■■■□□ 2.39
SSNA1-202ENST00000459860 CAMTA1Q9Y6Y1 1673 aa29.99■■■□□ 2.39
SSNA1-202ENST00000459860 STRN4Q9NRL3 753 aa29.99■■■□□ 2.39
SSNA1-202ENST00000459860 ABCC6O95255 1503 aa29.98■■■□□ 2.39
SSNA1-202ENST00000459860 EVA1CP58658 441 aa29.98■■■□□ 2.39
SSNA1-202ENST00000459860 COL18A1P39060 1754 aa29.98■■■□□ 2.39
SSNA1-202ENST00000459860 ARHGEF25Q86VW2 580 aa29.97■■■□□ 2.39
SSNA1-202ENST00000459860 CARD14Q9BXL6 1004 aa29.97■■■□□ 2.39
SSNA1-202ENST00000459860 RGPD5Q99666 1765 aa29.95■■■□□ 2.39
SSNA1-202ENST00000459860 FYB1O15117 783 aa29.95■■■□□ 2.39
SSNA1-202ENST00000459860 EN1Q05925 392 aaPredicted RBP29.95■■■□□ 2.39
SSNA1-202ENST00000459860 GGNBP2Q9H3C7 697 aa29.95■■■□□ 2.39
SSNA1-202ENST00000459860 CGNL1Q0VF96 1302 aa29.95■■■□□ 2.38
SSNA1-202ENST00000459860 COL5A2P05997 1499 aaPredicted RBP29.94■■■□□ 2.38
SSNA1-202ENST00000459860 ZEB1P37275 1124 aaPredicted RBP29.93■■■□□ 2.38
SSNA1-202ENST00000459860 PANK3Q9H999 370 aa29.93■■■□□ 2.38
SSNA1-202ENST00000459860 DISP2A7MBM2 1401 aa29.93■■■□□ 2.38
SSNA1-202ENST00000459860 ANKRD26Q9UPS8 1709 aa29.93■■■□□ 2.38
SSNA1-202ENST00000459860 PSDA5PKW4 1024 aaPredicted RBP29.91■■■□□ 2.38
SSNA1-202ENST00000459860 CCDC7Q96M83 1385 aa29.9■■■□□ 2.38
SSNA1-202ENST00000459860 BARGINQ6ZT62 677 aa29.89■■■□□ 2.38
SSNA1-202ENST00000459860 LARP1Q6PKG0 1096 aaKnown RBP29.87■■■□□ 2.37
SSNA1-202ENST00000459860 FAM196AQ6ZSG2 479 aa29.87■■■□□ 2.37
SSNA1-202ENST00000459860 USP35Q9P2H5 1018 aa29.87■■■□□ 2.37
SSNA1-202ENST00000459860 CRB1P82279 1406 aa29.86■■■□□ 2.37
SSNA1-202ENST00000459860 WASHC2AQ641Q2 1341 aa29.85■■■□□ 2.37
SSNA1-202ENST00000459860 TRIM37O94972 964 aa29.84■■■□□ 2.37
SSNA1-202ENST00000459860 EZH2Q15910 746 aaKnown RBP29.84■■■□□ 2.37
SSNA1-202ENST00000459860 CAMKK2Q96RR4 588 aa29.84■■■□□ 2.37
SSNA1-202ENST00000459860 AXIN2Q9Y2T1 843 aa29.84■■■□□ 2.37
SSNA1-202ENST00000459860 KNSTRNQ9Y448 316 aa29.84■■■□□ 2.37
SSNA1-202ENST00000459860 LRP5O75197 1615 aa29.83■■■□□ 2.37
SSNA1-202ENST00000459860 NSD2O96028 1365 aa29.83■■■□□ 2.37
SSNA1-202ENST00000459860 WDR17Q8IZU2 1322 aa29.83■■■□□ 2.37
SSNA1-202ENST00000459860 CSB-PGBD3P0DP91 1061 aa29.83■■■□□ 2.37
SSNA1-202ENST00000459860 RGPD1P0DJD0 1748 aa29.82■■■□□ 2.36
SSNA1-202ENST00000459860 AMPHP49418 695 aa29.81■■■□□ 2.36
SSNA1-202ENST00000459860 TOM1L2Q6ZVM7 507 aa29.81■■■□□ 2.36
SSNA1-202ENST00000459860 TCP11L2Q8N4U5 519 aa29.81■■■□□ 2.36
SSNA1-202ENST00000459860 RTL1A6NKG5 1358 aa29.8■■■□□ 2.36
SSNA1-202ENST00000459860 MAP3K19Q56UN5 1328 aa29.8■■■□□ 2.36
SSNA1-202ENST00000459860 FAM208AQ9UK61 1670 aaKnown RBP29.8■■■□□ 2.36
SSNA1-202ENST00000459860 TNS1Q9HBL0 1735 aaKnown RBP29.79■■■□□ 2.36
SSNA1-202ENST00000459860 R3HDM1Q15032 1099 aaKnown RBP29.79■■■□□ 2.36
SSNA1-202ENST00000459860 THRAP3Q9Y2W1 955 aaKnown RBP29.79■■■□□ 2.36
SSNA1-202ENST00000459860 IP6K1Q92551 441 aa29.78■■■□□ 2.36
SSNA1-202ENST00000459860 WNK3Q9BYP7 1800 aa29.78■■■□□ 2.36
SSNA1-202ENST00000459860 PDE3BQ13370 1112 aa29.77■■■□□ 2.36
SSNA1-202ENST00000459860 ERBB3P21860 1342 aa29.76■■■□□ 2.36
SSNA1-202ENST00000459860 RRS1Q15050 365 aaKnown RBP29.76■■■□□ 2.35
SSNA1-202ENST00000459860 MAP2P11137 1827 aaKnown RBP29.75■■■□□ 2.35
SSNA1-202ENST00000459860 APBA3O96018 575 aa29.75■■■□□ 2.35
SSNA1-202ENST00000459860 FBLN1P23142 703 aa29.75■■■□□ 2.35
SSNA1-202ENST00000459860 ANKRD24Q8TF21 1146 aa29.75■■■□□ 2.35
SSNA1-202ENST00000459860 HOXC9P31274 260 aa29.74■■■□□ 2.35
SSNA1-202ENST00000459860 KIF24Q5T7B8 1368 aa29.74■■■□□ 2.35
SSNA1-202ENST00000459860 PARD3Q8TEW0 1356 aa29.73■■■□□ 2.35
SSNA1-202ENST00000459860 PARP4Q9UKK3 1724 aaKnown RBP29.72■■■□□ 2.35
SSNA1-202ENST00000459860 CARD10Q9BWT7 1032 aa29.72■■■□□ 2.35
SSNA1-202ENST00000459860 FLT4P35916 1363 aa29.72■■■□□ 2.35
SSNA1-202ENST00000459860 SMG6Q86US8 1419 aaKnown RBP29.71■■■□□ 2.35
SSNA1-202ENST00000459860 PEAK1Q9H792 1746 aa29.71■■■□□ 2.35
SSNA1-202ENST00000459860 MORC1Q86VD1 984 aa29.7■■■□□ 2.35
SSNA1-202ENST00000459860 LTV1Q96GA3 475 aaPredicted RBP29.69■■■□□ 2.34
SSNA1-202ENST00000459860 NLRP2Q9NX02 1062 aa29.69■■■□□ 2.34
SSNA1-202ENST00000459860 TNNT2P45379 298 aaPredicted RBP29.68■■■□□ 2.34
SSNA1-202ENST00000459860 PPM1GO15355 546 aaPredicted RBP29.66■■■□□ 2.34
SSNA1-202ENST00000459860 AMER1Q5JTC6 1135 aaPredicted RBP29.66■■■□□ 2.34
SSNA1-202ENST00000459860 CDCA7Q9BWT1 371 aaPredicted RBP29.66■■■□□ 2.34
SSNA1-202ENST00000459860 EMILIN1Q9Y6C2 1016 aa29.66■■■□□ 2.34
SSNA1-202ENST00000459860 INSRP06213 1382 aa29.65■■■□□ 2.34
SSNA1-202ENST00000459860 LRRC37A3O60309 1634 aa29.65■■■□□ 2.34
SSNA1-202ENST00000459860 PER1O15534 1290 aaPredicted RBP29.64■■■□□ 2.34
SSNA1-202ENST00000459860 RGPD2P0DJD1 1756 aa29.64■■■□□ 2.34
SSNA1-202ENST00000459860 HSP90AB2PQ58FF8 381 aa29.6■■■□□ 2.33
SSNA1-202ENST00000459860 POLKQ9UBT6 870 aa29.6■■■□□ 2.33
SSNA1-202ENST00000459860 NPC1L1Q9UHC9 1359 aa29.6■■■□□ 2.33
SSNA1-202ENST00000459860 DDB1Q16531 1140 aa29.59■■■□□ 2.33
SSNA1-202ENST00000459860 CC2D1BQ5T0F9 858 aaKnown RBP29.59■■■□□ 2.33
SSNA1-202ENST00000459860 RREB1Q92766 1687 aa29.57■■■□□ 2.32
SSNA1-202ENST00000459860 OVOS2A0A0G2JMS6 1433 aa29.57■■■□□ 2.32
SSNA1-202ENST00000459860 IL2RBP14784 551 aa29.56■■■□□ 2.32
SSNA1-202ENST00000459860 NBPF14Q5TI25 921 aa29.54■■■□□ 2.32
SSNA1-202ENST00000459860 CNGB1Q14028 1251 aaPredicted RBP29.53■■■□□ 2.32
SSNA1-202ENST00000459860 PTF1AQ7RTS3 328 aa29.53■■■□□ 2.32
SSNA1-202ENST00000459860 TNS2Q63HR2 1409 aa29.53■■■□□ 2.32
SSNA1-202ENST00000459860 NUP188Q5SRE5 1749 aa29.52■■■□□ 2.32
SSNA1-202ENST00000459860 EXOC5O00471 708 aa29.52■■■□□ 2.32
SSNA1-202ENST00000459860 MARCH10Q8NA82 808 aaPredicted RBP29.52■■■□□ 2.32
SSNA1-202ENST00000459860 PLSCR1O15162 318 aa29.51■■■□□ 2.31
SSNA1-202ENST00000459860 BCL9O00512 1426 aa29.49■■■□□ 2.31
SSNA1-202ENST00000459860 NBPF6Q5VWK0 638 aa29.49■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms