RNA–Protein interactions for RNA: ENST00000458304.2

SPARCL1-204, Transcript of SPARC like 1, humanhuman

TSL 4

Gene SPARCL1, Length 568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCL1-204ENST00000458304 BIVM-ERCC5R4GMW8 1640 aa6.94□□□□□ -1.3
SPARCL1-204ENST00000458304 CEP164Q9UPV0 1460 aa6.94□□□□□ -1.3
SPARCL1-204ENST00000458304 WNT7AO00755 349 aa6.94□□□□□ -1.3
SPARCL1-204ENST00000458304 SMARCA5O60264 1052 aaPredicted RBP6.94□□□□□ -1.3
SPARCL1-204ENST00000458304 NCLP19338 710 aaKnown RBP6.94□□□□□ -1.3
SPARCL1-204ENST00000458304 SKOR1P84550 965 aa6.94□□□□□ -1.3
SPARCL1-204ENST00000458304 PTPRNQ16849 979 aa6.94□□□□□ -1.3
SPARCL1-204ENST00000458304 TUSC1Q2TAM9 212 aa6.94□□□□□ -1.3
SPARCL1-204ENST00000458304 PRPF38BQ5VTL8 546 aaKnown RBP6.94□□□□□ -1.3
SPARCL1-204ENST00000458304 DRC1Q96MC2 740 aa6.94□□□□□ -1.3
SPARCL1-204ENST00000458304 FANCD2Q9BXW9 1451 aa6.93□□□□□ -1.3
SPARCL1-204ENST00000458304 FAM187AA6NFU0 413 aa6.93□□□□□ -1.3
SPARCL1-204ENST00000458304 CFAP99D6REC4 459 aa6.93□□□□□ -1.3
SPARCL1-204ENST00000458304 CCNYL3P0C7X3 344 aa6.93□□□□□ -1.3
SPARCL1-204ENST00000458304 PKDCCQ504Y2 493 aa6.93□□□□□ -1.3
SPARCL1-204ENST00000458304 ZBTB3Q9H5J0 574 aa6.93□□□□□ -1.3
SPARCL1-204ENST00000458304 EVA1BQ9NVM1 165 aa6.93□□□□□ -1.3
SPARCL1-204ENST00000458304 KIAA1522Q9P206 1035 aaPredicted RBP6.93□□□□□ -1.3
SPARCL1-204ENST00000458304 ANKRD13AQ8IZ07 590 aa6.92□□□□□ -1.3
SPARCL1-204ENST00000458304 PROCA1Q8NCQ7 364 aaPredicted RBP6.92□□□□□ -1.3
SPARCL1-204ENST00000458304 CABLES1Q8TDN4 633 aa6.92□□□□□ -1.3
SPARCL1-204ENST00000458304 SREK1Q8WXA9 508 aaKnown RBP6.92□□□□□ -1.3
SPARCL1-204ENST00000458304 MRRFQ96E11 262 aaKnown RBP6.92□□□□□ -1.3
SPARCL1-204ENST00000458304 SNRKQ9NRH2 765 aa6.92□□□□□ -1.3
SPARCL1-204ENST00000458304 ARID4BQ4LE39 1312 aaPredicted RBP6.92□□□□□ -1.3
SPARCL1-204ENST00000458304 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.91□□□□□ -1.3
SPARCL1-204ENST00000458304 LILRB3O75022 631 aa6.91□□□□□ -1.3
SPARCL1-204ENST00000458304 WNT7BP56706 349 aa6.91□□□□□ -1.3
SPARCL1-204ENST00000458304 QPCTQ16769 361 aa6.91□□□□□ -1.3
SPARCL1-204ENST00000458304 LYPD8Q6UX82 237 aa6.91□□□□□ -1.3
SPARCL1-204ENST00000458304 AVPP01185 164 aa6.9□□□□□ -1.3
SPARCL1-204ENST00000458304 KCNH2Q12809 1159 aa6.9□□□□□ -1.3
SPARCL1-204ENST00000458304 CSPP1Q1MSJ5 1256 aa6.9□□□□□ -1.3
SPARCL1-204ENST00000458304 RC3H1Q5TC82 1133 aaKnown RBP6.9□□□□□ -1.3
SPARCL1-204ENST00000458304 CYP4X1Q8N118 509 aa6.9□□□□□ -1.3
SPARCL1-204ENST00000458304 MRGPRX2Q96LB1 330 aa6.9□□□□□ -1.3
SPARCL1-204ENST00000458304 GDPD2Q9HCC8 539 aa6.9□□□□□ -1.3
SPARCL1-204ENST00000458304 KIF27Q86VH2 1401 aa6.9□□□□□ -1.31
SPARCL1-204ENST00000458304 DNMBPQ6XZF7 1577 aa6.9□□□□□ -1.31
SPARCL1-204ENST00000458304 POM121CA8CG34 1229 aa6.89□□□□□ -1.31
SPARCL1-204ENST00000458304 TCF3P15923 654 aa6.89□□□□□ -1.31
SPARCL1-204ENST00000458304 ERCC3P19447 782 aa6.89□□□□□ -1.31
SPARCL1-204ENST00000458304 CLK2P49760 499 aaKnown RBP6.89□□□□□ -1.31
SPARCL1-204ENST00000458304 TXNDC2Q86VQ3 553 aa6.89□□□□□ -1.31
SPARCL1-204ENST00000458304 C8orf37Q96NL8 207 aa6.89□□□□□ -1.31
SPARCL1-204ENST00000458304 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.89□□□□□ -1.31
SPARCL1-204ENST00000458304 UNC93B1Q9H1C4 597 aa6.89□□□□□ -1.31
SPARCL1-204ENST00000458304 VRTNQ9H8Y1 702 aa6.89□□□□□ -1.31
SPARCL1-204ENST00000458304 GNEQ9Y223 722 aaKnown RBP6.89□□□□□ -1.31
SPARCL1-204ENST00000458304 SYNJ1O43426 1573 aa6.89□□□□□ -1.31
SPARCL1-204ENST00000458304 ERCC6Q03468 1493 aa6.88□□□□□ -1.31
SPARCL1-204ENST00000458304 CARNS1A5YM72 827 aa6.88□□□□□ -1.31
SPARCL1-204ENST00000458304 F12P00748 615 aaPredicted RBP6.88□□□□□ -1.31
SPARCL1-204ENST00000458304 SMPD1P17405 629 aa6.88□□□□□ -1.31
SPARCL1-204ENST00000458304 SH3BP2P78314 561 aa6.88□□□□□ -1.31
SPARCL1-204ENST00000458304 SNIP1Q8TAD8 396 aaKnown RBP6.88□□□□□ -1.31
SPARCL1-204ENST00000458304 AAASQ9NRG9 546 aa6.88□□□□□ -1.31
SPARCL1-204ENST00000458304 POLR3EQ9NVU0 708 aa6.88□□□□□ -1.31
SPARCL1-204ENST00000458304 GOLGA3Q08378 1498 aa6.87□□□□□ -1.31
SPARCL1-204ENST00000458304 SIAH2O43255 324 aa6.87□□□□□ -1.31
SPARCL1-204ENST00000458304 RFX1P22670 979 aa6.87□□□□□ -1.31
SPARCL1-204ENST00000458304 SRPK2P78362 688 aaKnown RBP6.87□□□□□ -1.31
SPARCL1-204ENST00000458304 RTL5Q5HYW3 569 aaPredicted RBP6.87□□□□□ -1.31
SPARCL1-204ENST00000458304 CERS3Q8IU89 383 aa6.87□□□□□ -1.31
SPARCL1-204ENST00000458304 CRIPAKQ8N1N5 446 aa6.87□□□□□ -1.31
SPARCL1-204ENST00000458304 TTC24A2A3L6 582 aaPredicted RBP6.86□□□□□ -1.31
SPARCL1-204ENST00000458304 J3QL48 77 aa6.86□□□□□ -1.31
SPARCL1-204ENST00000458304 ST8SIA5O15466 376 aa6.86□□□□□ -1.31
SPARCL1-204ENST00000458304 PER1O15534 1290 aaPredicted RBP6.86□□□□□ -1.31
SPARCL1-204ENST00000458304 RFC5P40937 340 aa6.86□□□□□ -1.31
SPARCL1-204ENST00000458304 ABL2P42684 1182 aa6.86□□□□□ -1.31
SPARCL1-204ENST00000458304 SMCPP49901 116 aaPredicted RBP6.86□□□□□ -1.31
SPARCL1-204ENST00000458304 TMEM259Q4ZIN3 620 aa6.86□□□□□ -1.31
SPARCL1-204ENST00000458304 CFAP70Q5T0N1 1121 aa6.86□□□□□ -1.31
SPARCL1-204ENST00000458304 FBXO31Q5XUX0 539 aaPredicted RBP6.86□□□□□ -1.31
SPARCL1-204ENST00000458304 BAP1Q92560 729 aa6.86□□□□□ -1.31
SPARCL1-204ENST00000458304 PRM3Q9NNZ6 103 aa6.86□□□□□ -1.31
SPARCL1-204ENST00000458304 B4GALNT3Q6L9W6 998 aa6.85□□□□□ -1.31
SPARCL1-204ENST00000458304 PSMD1Q99460 953 aa6.85□□□□□ -1.31
SPARCL1-204ENST00000458304 MAP10Q9P2G4 905 aa6.85□□□□□ -1.31
SPARCL1-204ENST00000458304 KIF21BO75037 1637 aa6.85□□□□□ -1.31
SPARCL1-204ENST00000458304 CUX1P39880 1505 aa6.85□□□□□ -1.31
SPARCL1-204ENST00000458304 NUTM2BA6NNL0 878 aaPredicted RBP6.84□□□□□ -1.31
SPARCL1-204ENST00000458304 NUTM2EB1AL46 878 aaPredicted RBP6.84□□□□□ -1.31
SPARCL1-204ENST00000458304 ZNF16P17020 682 aaPredicted RBP6.84□□□□□ -1.31
SPARCL1-204ENST00000458304 LINC01559Q495D7 138 aa6.84□□□□□ -1.31
SPARCL1-204ENST00000458304 NUTM2DQ5VT03 806 aaPredicted RBP6.84□□□□□ -1.31
SPARCL1-204ENST00000458304 CC2D2BQ6DHV5 1058 aa6.84□□□□□ -1.31
SPARCL1-204ENST00000458304 NUTM2AQ8IVF1 878 aaPredicted RBP6.84□□□□□ -1.31
SPARCL1-204ENST00000458304 ZNF511Q8NB15 262 aa6.84□□□□□ -1.31
SPARCL1-204ENST00000458304 MTMR14Q8NCE2 650 aa6.84□□□□□ -1.31
SPARCL1-204ENST00000458304 UBXN4Q92575 508 aa6.84□□□□□ -1.31
SPARCL1-204ENST00000458304 SIRT1Q96EB6 747 aa6.84□□□□□ -1.31
SPARCL1-204ENST00000458304 MRC2Q9UBG0 1479 aa6.84□□□□□ -1.31
SPARCL1-204ENST00000458304 KIF21AQ7Z4S6 1674 aa6.84□□□□□ -1.32
SPARCL1-204ENST00000458304 TOPBP1Q92547 1522 aa6.83□□□□□ -1.32
SPARCL1-204ENST00000458304 POTECB2RU33 542 aa6.83□□□□□ -1.32
SPARCL1-204ENST00000458304 CTHP32929 405 aa6.83□□□□□ -1.32
SPARCL1-204ENST00000458304 CTC1Q2NKJ3 1217 aa6.83□□□□□ -1.32
SPARCL1-204ENST00000458304 TAF7LQ5H9L4 462 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms