RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 COL5A2P05997 1499 aaPredicted RBP32.05■■■□□ 2.72
CBX3-204ENST00000456948 CSB-PGBD3P0DP91 1061 aa32.04■■■□□ 2.72
CBX3-204ENST00000456948 BARGINQ6ZT62 677 aa32.04■■■□□ 2.72
CBX3-204ENST00000456948 TOM1L2Q6ZVM7 507 aa32.04■■■□□ 2.72
CBX3-204ENST00000456948 USP54Q70EL1 1684 aa32.04■■■□□ 2.72
CBX3-204ENST00000456948 NFAT5O94916 1531 aa32.02■■■□□ 2.72
CBX3-204ENST00000456948 OVOS2A0A0J9YW53 1432 aa32.01■■■□□ 2.72
CBX3-204ENST00000456948 CRB1P82279 1406 aa32.01■■■□□ 2.72
CBX3-204ENST00000456948 OVOS2Q6IE36 1432 aa32.01■■■□□ 2.72
CBX3-204ENST00000456948 AXIN2Q9Y2T1 843 aa32.01■■■□□ 2.71
CBX3-204ENST00000456948 WDR17Q8IZU2 1322 aa32■■■□□ 2.71
CBX3-204ENST00000456948 FYB1O15117 783 aa31.99■■■□□ 2.71
CBX3-204ENST00000456948 ABCC6O95255 1503 aa31.99■■■□□ 2.71
CBX3-204ENST00000456948 SF3B2Q13435 895 aaKnown RBP31.97■■■□□ 2.71
CBX3-204ENST00000456948 COL18A1P39060 1754 aa31.96■■■□□ 2.71
CBX3-204ENST00000456948 PDE3BQ13370 1112 aa31.96■■■□□ 2.71
CBX3-204ENST00000456948 GGNBP2Q9H3C7 697 aa31.96■■■□□ 2.71
CBX3-204ENST00000456948 BLMP54132 1417 aaPredicted RBP31.95■■■□□ 2.71
CBX3-204ENST00000456948 CGNL1Q0VF96 1302 aa31.95■■■□□ 2.7
CBX3-204ENST00000456948 CDCA7Q9BWT1 371 aaPredicted RBP31.94■■■□□ 2.7
CBX3-204ENST00000456948 NSD3Q9BZ95 1437 aa31.93■■■□□ 2.7
CBX3-204ENST00000456948 CARD10Q9BWT7 1032 aa31.93■■■□□ 2.7
CBX3-204ENST00000456948 CARD14Q9BXL6 1004 aa31.93■■■□□ 2.7
CBX3-204ENST00000456948 MYOM1P52179 1685 aa31.92■■■□□ 2.7
CBX3-204ENST00000456948 AMPHP49418 695 aa31.92■■■□□ 2.7
CBX3-204ENST00000456948 FAM182BQ5T319 152 aa31.92■■■□□ 2.7
CBX3-204ENST00000456948 IP6K1Q92551 441 aa31.92■■■□□ 2.7
CBX3-204ENST00000456948 THSD7AQ9UPZ6 1657 aa31.9■■■□□ 2.7
CBX3-204ENST00000456948 LTN1O94822 1766 aa31.9■■■□□ 2.7
CBX3-204ENST00000456948 DEFB132Q7Z7B7 95 aa31.88■■■□□ 2.69
CBX3-204ENST00000456948 PANK3Q9H999 370 aa31.88■■■□□ 2.69
CBX3-204ENST00000456948 CCDC7Q96M83 1385 aa31.88■■■□□ 2.69
CBX3-204ENST00000456948 RGPD5Q99666 1765 aa31.88■■■□□ 2.69
CBX3-204ENST00000456948 ERBB3P21860 1342 aa31.87■■■□□ 2.69
CBX3-204ENST00000456948 C11orf95C9JLR9 678 aaPredicted RBP31.87■■■□□ 2.69
CBX3-204ENST00000456948 FAM196AQ6ZSG2 479 aa31.87■■■□□ 2.69
CBX3-204ENST00000456948 ANKRD24Q8TF21 1146 aa31.87■■■□□ 2.69
CBX3-204ENST00000456948 NLRP2Q9NX02 1062 aa31.87■■■□□ 2.69
CBX3-204ENST00000456948 KIF20BQ96Q89 1820 aa31.86■■■□□ 2.69
CBX3-204ENST00000456948 MAP3K19Q56UN5 1328 aa31.85■■■□□ 2.69
CBX3-204ENST00000456948 DDB1Q16531 1140 aa31.84■■■□□ 2.69
CBX3-204ENST00000456948 HOXC9P31274 260 aa31.82■■■□□ 2.68
CBX3-204ENST00000456948 RTL1A6NKG5 1358 aa31.81■■■□□ 2.68
CBX3-204ENST00000456948 RRS1Q15050 365 aaKnown RBP31.8■■■□□ 2.68
CBX3-204ENST00000456948 LTV1Q96GA3 475 aaPredicted RBP31.8■■■□□ 2.68
CBX3-204ENST00000456948 KNSTRNQ9Y448 316 aa31.79■■■□□ 2.68
CBX3-204ENST00000456948 KIF7Q2M1P5 1343 aa31.78■■■□□ 2.68
CBX3-204ENST00000456948 EXOC5O00471 708 aa31.78■■■□□ 2.68
CBX3-204ENST00000456948 FBLN1P23142 703 aa31.78■■■□□ 2.68
CBX3-204ENST00000456948 BAG6P46379 1132 aa31.78■■■□□ 2.68
CBX3-204ENST00000456948 KIF24Q5T7B8 1368 aa31.78■■■□□ 2.68
CBX3-204ENST00000456948 PARP4Q9UKK3 1724 aaKnown RBP31.76■■■□□ 2.67
CBX3-204ENST00000456948 SMG6Q86US8 1419 aaKnown RBP31.75■■■□□ 2.67
CBX3-204ENST00000456948 NSD2O96028 1365 aa31.74■■■□□ 2.67
CBX3-204ENST00000456948 IL2RBP14784 551 aa31.73■■■□□ 2.67
CBX3-204ENST00000456948 RGPD1P0DJD0 1748 aa31.72■■■□□ 2.67
CBX3-204ENST00000456948 FLT4P35916 1363 aa31.72■■■□□ 2.67
CBX3-204ENST00000456948 TRIM37O94972 964 aa31.71■■■□□ 2.67
CBX3-204ENST00000456948 PPM1GO15355 546 aaPredicted RBP31.7■■■□□ 2.67
CBX3-204ENST00000456948 FAM208AQ9UK61 1670 aaKnown RBP31.7■■■□□ 2.66
CBX3-204ENST00000456948 EN1Q05925 392 aaPredicted RBP31.69■■■□□ 2.66
CBX3-204ENST00000456948 OVOS2A0A0G2JMS6 1433 aa31.68■■■□□ 2.66
CBX3-204ENST00000456948 INSRP06213 1382 aa31.68■■■□□ 2.66
CBX3-204ENST00000456948 MORC1Q86VD1 984 aa31.67■■■□□ 2.66
CBX3-204ENST00000456948 DISP2A7MBM2 1401 aa31.66■■■□□ 2.66
CBX3-204ENST00000456948 HSP90AB2PQ58FF8 381 aa31.66■■■□□ 2.66
CBX3-204ENST00000456948 WNK3Q9BYP7 1800 aa31.65■■■□□ 2.66
CBX3-204ENST00000456948 TNNT2P45379 298 aaPredicted RBP31.65■■■□□ 2.66
CBX3-204ENST00000456948 EMILIN1Q9Y6C2 1016 aa31.65■■■□□ 2.66
CBX3-204ENST00000456948 LRRC37A3O60309 1634 aa31.64■■■□□ 2.65
CBX3-204ENST00000456948 APBA3O96018 575 aa31.62■■■□□ 2.65
CBX3-204ENST00000456948 TNS1Q9HBL0 1735 aaKnown RBP31.62■■■□□ 2.65
CBX3-204ENST00000456948 ANKRD26Q9UPS8 1709 aa31.61■■■□□ 2.65
CBX3-204ENST00000456948 WASHC2AQ641Q2 1341 aa31.61■■■□□ 2.65
CBX3-204ENST00000456948 MARCH10Q8NA82 808 aaPredicted RBP31.61■■■□□ 2.65
CBX3-204ENST00000456948 TNS2Q63HR2 1409 aa31.6■■■□□ 2.65
CBX3-204ENST00000456948 POLKQ9UBT6 870 aa31.6■■■□□ 2.65
CBX3-204ENST00000456948 MAP2P11137 1827 aaKnown RBP31.6■■■□□ 2.65
CBX3-204ENST00000456948 RAPGEF4Q8WZA2 1011 aa31.59■■■□□ 2.65
CBX3-204ENST00000456948 EZH2Q15910 746 aaKnown RBP31.58■■■□□ 2.65
CBX3-204ENST00000456948 NBPF6Q5VWK0 638 aa31.58■■■□□ 2.65
CBX3-204ENST00000456948 NBPF4Q96M43 638 aa31.58■■■□□ 2.65
CBX3-204ENST00000456948 BCL9O00512 1426 aa31.56■■■□□ 2.64
CBX3-204ENST00000456948 AMER1Q5JTC6 1135 aaPredicted RBP31.55■■■□□ 2.64
CBX3-204ENST00000456948 BCL11BQ9C0K0 894 aaPredicted RBP31.55■■■□□ 2.64
CBX3-204ENST00000456948 PARD3Q8TEW0 1356 aa31.54■■■□□ 2.64
CBX3-204ENST00000456948 PEAK1Q9H792 1746 aa31.53■■■□□ 2.64
CBX3-204ENST00000456948 PSDA5PKW4 1024 aaPredicted RBP31.53■■■□□ 2.64
CBX3-204ENST00000456948 TATP17735 454 aaPredicted RBP31.53■■■□□ 2.64
CBX3-204ENST00000456948 PER1O15534 1290 aaPredicted RBP31.52■■■□□ 2.64
CBX3-204ENST00000456948 ZCRB1Q8TBF4 217 aaKnown RBP31.52■■■□□ 2.64
CBX3-204ENST00000456948 CAMKK2Q96RR4 588 aa31.52■■■□□ 2.64
CBX3-204ENST00000456948 DDX54Q8TDD1 881 aaKnown RBP31.51■■■□□ 2.63
CBX3-204ENST00000456948 USHBP1Q8N6Y0 703 aa31.5■■■□□ 2.63
CBX3-204ENST00000456948 RGPD2P0DJD1 1756 aa31.49■■■□□ 2.63
CBX3-204ENST00000456948 CC2D1BQ5T0F9 858 aaKnown RBP31.47■■■□□ 2.63
CBX3-204ENST00000456948 KAT6BQ8WYB5 2073 aa31.46■■■□□ 2.63
CBX3-204ENST00000456948 SRCAPQ6ZRS2 3230 aa31.46■■■□□ 2.63
CBX3-204ENST00000456948 PLSCR1O15162 318 aa31.45■■■□□ 2.63
CBX3-204ENST00000456948 ZEB1P37275 1124 aaPredicted RBP31.45■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms