RNA–Protein interactions for RNA: ENST00000456563.1

FAM239A-203, Transcript of family with sequence similarity 239 member A, humanhuman

TSL 3

Gene FAM239A, Length 793 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM239A-203ENST00000456563 LTN1O94822 1766 aa24.24■■□□□ 1.47
FAM239A-203ENST00000456563 HOXC9P31274 260 aa24.24■■□□□ 1.47
FAM239A-203ENST00000456563 USP21Q9UK80 565 aa24.24■■□□□ 1.47
FAM239A-203ENST00000456563 PLCH1Q4KWH8 1693 aa24.24■■□□□ 1.47
FAM239A-203ENST00000456563 RALBP1Q15311 655 aa24.23■■□□□ 1.47
FAM239A-203ENST00000456563 UNC5CLQ8IV45 518 aa24.23■■□□□ 1.47
FAM239A-203ENST00000456563 SMG6Q86US8 1419 aaKnown RBP24.23■■□□□ 1.47
FAM239A-203ENST00000456563 NWD2Q9ULI1 1742 aa24.23■■□□□ 1.47
FAM239A-203ENST00000456563 BLMP54132 1417 aaPredicted RBP24.22■■□□□ 1.47
FAM239A-203ENST00000456563 FLT4P35916 1363 aa24.22■■□□□ 1.47
FAM239A-203ENST00000456563 ZNF772Q68DY9 489 aaPredicted RBP24.21■■□□□ 1.47
FAM239A-203ENST00000456563 PHF23Q9BUL5 403 aaPredicted RBP24.21■■□□□ 1.47
FAM239A-203ENST00000456563 MAP2P11137 1827 aaKnown RBP24.2■■□□□ 1.46
FAM239A-203ENST00000456563 COL5A2P05997 1499 aaPredicted RBP24.19■■□□□ 1.46
FAM239A-203ENST00000456563 PEAK1Q9H792 1746 aa24.19■■□□□ 1.46
FAM239A-203ENST00000456563 PPM1GO15355 546 aaPredicted RBP24.19■■□□□ 1.46
FAM239A-203ENST00000456563 RGS17Q9UGC6 210 aaPredicted RBP24.19■■□□□ 1.46
FAM239A-203ENST00000456563 NRAPQ86VF7 1730 aa24.18■■□□□ 1.46
FAM239A-203ENST00000456563 INSRP06213 1382 aa24.18■■□□□ 1.46
FAM239A-203ENST00000456563 PPP2R1AP30153 589 aa24.18■■□□□ 1.46
FAM239A-203ENST00000456563 MTHFSP49914 203 aa24.18■■□□□ 1.46
FAM239A-203ENST00000456563 EVA1CP58658 441 aa24.18■■□□□ 1.46
FAM239A-203ENST00000456563 PRKRIP1Q9H875 184 aaPredicted RBP24.18■■□□□ 1.46
FAM239A-203ENST00000456563 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.18■■□□□ 1.46
FAM239A-203ENST00000456563 HSP90AB2PQ58FF8 381 aa24.17■■□□□ 1.46
FAM239A-203ENST00000456563 STRN4Q9NRL3 753 aa24.17■■□□□ 1.46
FAM239A-203ENST00000456563 ERBB3P21860 1342 aa24.16■■□□□ 1.46
FAM239A-203ENST00000456563 CDK12Q9NYV4 1490 aaPredicted RBP24.16■■□□□ 1.46
FAM239A-203ENST00000456563 VPS72Q15906 364 aa24.16■■□□□ 1.46
FAM239A-203ENST00000456563 ANKRD24Q8TF21 1146 aa24.16■■□□□ 1.46
FAM239A-203ENST00000456563 TRPC5Q9UL62 973 aaPredicted RBP24.16■■□□□ 1.46
FAM239A-203ENST00000456563 ATRNO75882 1429 aa24.15■■□□□ 1.46
FAM239A-203ENST00000456563 WDR17Q8IZU2 1322 aa24.14■■□□□ 1.46
FAM239A-203ENST00000456563 RGPD5Q99666 1765 aa24.14■■□□□ 1.46
FAM239A-203ENST00000456563 QTRT2Q9H974 415 aaKnown RBP24.14■■□□□ 1.45
FAM239A-203ENST00000456563 LARP1Q6PKG0 1096 aaKnown RBP24.13■■□□□ 1.45
FAM239A-203ENST00000456563 ANP32CO43423 234 aa24.12■■□□□ 1.45
FAM239A-203ENST00000456563 MYBBP1AQ9BQG0 1328 aaKnown RBP24.11■■□□□ 1.45
FAM239A-203ENST00000456563 CSB-PGBD3P0DP91 1061 aa24.11■■□□□ 1.45
FAM239A-203ENST00000456563 LTV1Q96GA3 475 aaPredicted RBP24.11■■□□□ 1.45
FAM239A-203ENST00000456563 SPATA31A5Q5VU36 1347 aa24.1■■□□□ 1.45
FAM239A-203ENST00000456563 SPATA31A7Q8IWB4 1347 aa24.1■■□□□ 1.45
FAM239A-203ENST00000456563 CRB1P82279 1406 aa24.1■■□□□ 1.45
FAM239A-203ENST00000456563 TOM1L2Q6ZVM7 507 aa24.1■■□□□ 1.45
FAM239A-203ENST00000456563 POTEAQ6S8J7 498 aa24.09■■□□□ 1.45
FAM239A-203ENST00000456563 GJD4Q96KN9 370 aaPredicted RBP24.09■■□□□ 1.45
FAM239A-203ENST00000456563 EIF4A2Q14240 407 aaKnown RBP24.08■■□□□ 1.45
FAM239A-203ENST00000456563 CARD10Q9BWT7 1032 aa24.08■■□□□ 1.45
FAM239A-203ENST00000456563 CCDC9Q9Y3X0 531 aaKnown RBP24.08■■□□□ 1.45
FAM239A-203ENST00000456563 SPATA31A1Q5TZJ5 1347 aa24.08■■□□□ 1.44
FAM239A-203ENST00000456563 CFAP53Q96M91 514 aa24.07■■□□□ 1.44
FAM239A-203ENST00000456563 NLRP2Q9NX02 1062 aa24.06■■□□□ 1.44
FAM239A-203ENST00000456563 IL13P35225 146 aa24.05■■□□□ 1.44
FAM239A-203ENST00000456563 RBM6P78332 1123 aaKnown RBP24.05■■□□□ 1.44
FAM239A-203ENST00000456563 THRAP3Q9Y2W1 955 aaKnown RBP24.05■■□□□ 1.44
FAM239A-203ENST00000456563 COL3A1P02461 1466 aaPredicted RBP24.05■■□□□ 1.44
FAM239A-203ENST00000456563 FAM208AQ9UK61 1670 aaKnown RBP24.05■■□□□ 1.44
FAM239A-203ENST00000456563 DIAPH1O60610 1272 aaKnown RBP24.04■■□□□ 1.44
FAM239A-203ENST00000456563 NBPF6Q5VWK0 638 aa24.04■■□□□ 1.44
FAM239A-203ENST00000456563 DIEXFQ68CQ4 756 aaKnown RBP24.04■■□□□ 1.44
FAM239A-203ENST00000456563 TCP11L2Q8N4U5 519 aa24.04■■□□□ 1.44
FAM239A-203ENST00000456563 NBPF4Q96M43 638 aa24.04■■□□□ 1.44
FAM239A-203ENST00000456563 GLI3P10071 1580 aa24.03■■□□□ 1.44
FAM239A-203ENST00000456563 RXRBP28702 533 aa24.03■■□□□ 1.44
FAM239A-203ENST00000456563 BARGINQ6ZT62 677 aa24.02■■□□□ 1.44
FAM239A-203ENST00000456563 EYA1Q99502 592 aa24.02■■□□□ 1.44
FAM239A-203ENST00000456563 USP35Q9P2H5 1018 aa24.02■■□□□ 1.44
FAM239A-203ENST00000456563 ONECUT3O60422 494 aaPredicted RBP24■■□□□ 1.43
FAM239A-203ENST00000456563 NCAPD2Q15021 1401 aa24■■□□□ 1.43
FAM239A-203ENST00000456563 IGSF1Q8N6C5 1336 aa23.99■■□□□ 1.43
FAM239A-203ENST00000456563 FAM98CQ17RN3 349 aaKnown RBP23.97■■□□□ 1.43
FAM239A-203ENST00000456563 RGPD2P0DJD1 1756 aa23.96■■□□□ 1.43
FAM239A-203ENST00000456563 USHBP1Q8N6Y0 703 aa23.96■■□□□ 1.43
FAM239A-203ENST00000456563 CDCA7Q9BWT1 371 aaPredicted RBP23.96■■□□□ 1.43
FAM239A-203ENST00000456563 NUDCQ9Y266 331 aa23.96■■□□□ 1.43
FAM239A-203ENST00000456563 DISP2A7MBM2 1401 aa23.95■■□□□ 1.42
FAM239A-203ENST00000456563 RGPD1P0DJD0 1748 aa23.95■■□□□ 1.42
FAM239A-203ENST00000456563 IL2RBP14784 551 aa23.93■■□□□ 1.42
FAM239A-203ENST00000456563 U2SURPO15042 1029 aaKnown RBP23.92■■□□□ 1.42
FAM239A-203ENST00000456563 KDRP35968 1356 aa23.91■■□□□ 1.42
FAM239A-203ENST00000456563 SULT6B1Q6IMI4 303 aa23.91■■□□□ 1.42
FAM239A-203ENST00000456563 SEPT12Q8IYM1 358 aa23.91■■□□□ 1.42
FAM239A-203ENST00000456563 THSD7AQ9UPZ6 1657 aa23.91■■□□□ 1.42
FAM239A-203ENST00000456563 RAPGEF4Q8WZA2 1011 aa23.9■■□□□ 1.42
FAM239A-203ENST00000456563 CCDC184Q52MB2 194 aa23.89■■□□□ 1.41
FAM239A-203ENST00000456563 AEBP1Q8IUX7 1158 aa23.89■■□□□ 1.41
FAM239A-203ENST00000456563 RGS12O14924 1447 aa23.89■■□□□ 1.41
FAM239A-203ENST00000456563 MEGF6O75095 1541 aa23.89■■□□□ 1.41
FAM239A-203ENST00000456563 A0A0G2JS52 829 aa23.88■■□□□ 1.41
FAM239A-203ENST00000456563 TATP17735 454 aaPredicted RBP23.88■■□□□ 1.41
FAM239A-203ENST00000456563 MYT1Q01538 1121 aa23.88■■□□□ 1.41
FAM239A-203ENST00000456563 WNK3Q9BYP7 1800 aa23.88■■□□□ 1.41
FAM239A-203ENST00000456563 HMOX1P09601 288 aa23.87■■□□□ 1.41
FAM239A-203ENST00000456563 U2AF1L5P0DN76 240 aaPredicted RBP23.87■■□□□ 1.41
FAM239A-203ENST00000456563 U2AF1Q01081 240 aaKnown RBP eCLIP23.87■■□□□ 1.41
FAM239A-203ENST00000456563 PLEKHG2Q9H7P9 1386 aa23.87■■□□□ 1.41
FAM239A-203ENST00000456563 OVOS2A0A0G2JMS6 1433 aa23.86■■□□□ 1.41
FAM239A-203ENST00000456563 PARP4Q9UKK3 1724 aaKnown RBP23.86■■□□□ 1.41
FAM239A-203ENST00000456563 EXOC5O00471 708 aa23.85■■□□□ 1.41
FAM239A-203ENST00000456563 DDB1Q16531 1140 aa23.85■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms