RNA–Protein interactions for RNA: ENST00000455554.2

LINC02540-201, Transcript of long intergenic non-protein coding RNA 2540, humanhuman

TSL 3 BASIC

Gene LINC02540, Length 570 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02540-201ENST00000455554 NUTM2EB1AL46 878 aaPredicted RBP6.4□□□□□ -1.38
LINC02540-201ENST00000455554 RTL5Q5HYW3 569 aaPredicted RBP6.4□□□□□ -1.38
LINC02540-201ENST00000455554 NUTM2DQ5VT03 806 aaPredicted RBP6.4□□□□□ -1.38
LINC02540-201ENST00000455554 NUTM2AQ8IVF1 878 aaPredicted RBP6.4□□□□□ -1.38
LINC02540-201ENST00000455554 CCDC155Q8N6L0 562 aa6.4□□□□□ -1.38
LINC02540-201ENST00000455554 RNF225M0QZC1 329 aaPredicted RBP6.39□□□□□ -1.39
LINC02540-201ENST00000455554 TRIM66O15016 1216 aa6.39□□□□□ -1.39
LINC02540-201ENST00000455554 ARHGEF15O94989 841 aa6.39□□□□□ -1.39
LINC02540-201ENST00000455554 FBXO31Q5XUX0 539 aaPredicted RBP6.39□□□□□ -1.39
LINC02540-201ENST00000455554 AGBL1Q96MI9 1066 aa6.39□□□□□ -1.39
LINC02540-201ENST00000455554 CARD14Q9BXL6 1004 aa6.39□□□□□ -1.39
LINC02540-201ENST00000455554 SLC35F4A4IF30 521 aa6.38□□□□□ -1.39
LINC02540-201ENST00000455554 LILRB3O75022 631 aa6.38□□□□□ -1.39
LINC02540-201ENST00000455554 CTSOP43234 321 aaPredicted RBP6.38□□□□□ -1.39
LINC02540-201ENST00000455554 TUSC1Q2TAM9 212 aa6.38□□□□□ -1.39
LINC02540-201ENST00000455554 ERFEQ4G0M1 354 aa6.38□□□□□ -1.39
LINC02540-201ENST00000455554 PPP1R26Q5T8A7 1209 aaPredicted RBP6.38□□□□□ -1.39
LINC02540-201ENST00000455554 MYSM1Q5VVJ2 828 aa6.38□□□□□ -1.39
LINC02540-201ENST00000455554 HELBQ8NG08 1087 aaPredicted RBP6.38□□□□□ -1.39
LINC02540-201ENST00000455554 Q6ZVU0 165 aa6.37□□□□□ -1.39
LINC02540-201ENST00000455554 VWA5B2Q8N398 1253 aa6.37□□□□□ -1.39
LINC02540-201ENST00000455554 NANOS1Q8WY41 292 aaKnown RBP6.37□□□□□ -1.39
LINC02540-201ENST00000455554 GPKOWQ92917 476 aaPredicted RBP eCLIP6.37□□□□□ -1.39
LINC02540-201ENST00000455554 PGPEP1Q9NXJ5 209 aa6.37□□□□□ -1.39
LINC02540-201ENST00000455554 SENP3-EIF4A1A0A087X0R7 540 aa6.36□□□□□ -1.39
LINC02540-201ENST00000455554 SPINT1O43278 529 aa6.36□□□□□ -1.39
LINC02540-201ENST00000455554 IRS1P35568 1242 aa6.36□□□□□ -1.39
LINC02540-201ENST00000455554 SVOPQ8N4V2 548 aa6.36□□□□□ -1.39
LINC02540-201ENST00000455554 AK7Q96M32 723 aa6.36□□□□□ -1.39
LINC02540-201ENST00000455554 OCSTAMPQ9BR26 566 aa6.36□□□□□ -1.39
LINC02540-201ENST00000455554 SLURP2P0DP57 97 aa6.35□□□□□ -1.39
LINC02540-201ENST00000455554 GPAT2Q6NUI2 795 aa6.35□□□□□ -1.39
LINC02540-201ENST00000455554 CUEDC1Q9NWM3 386 aaPredicted RBP6.35□□□□□ -1.39
LINC02540-201ENST00000455554 CDC14CA4D256 554 aa6.34□□□□□ -1.39
LINC02540-201ENST00000455554 ITGA6P23229 1130 aa6.34□□□□□ -1.39
LINC02540-201ENST00000455554 LYPD4Q6UWN0 246 aa6.34□□□□□ -1.39
LINC02540-201ENST00000455554 INSM2Q96T92 566 aaPredicted RBP6.34□□□□□ -1.39
LINC02540-201ENST00000455554 RELBQ01201 579 aa6.33□□□□□ -1.4
LINC02540-201ENST00000455554 CTDSPL2Q05D32 466 aa6.33□□□□□ -1.4
LINC02540-201ENST00000455554 ZNF395Q9H8N7 513 aaPredicted RBP6.33□□□□□ -1.4
LINC02540-201ENST00000455554 CDV3Q9UKY7 258 aaKnown RBP6.33□□□□□ -1.4
LINC02540-201ENST00000455554 ITGB2P05107 769 aa6.32□□□□□ -1.4
LINC02540-201ENST00000455554 CLK2P49760 499 aaKnown RBP6.32□□□□□ -1.4
LINC02540-201ENST00000455554 DHX9Q08211 1270 aaKnown RBP6.32□□□□□ -1.4
LINC02540-201ENST00000455554 GAS6Q14393 721 aa6.32□□□□□ -1.4
LINC02540-201ENST00000455554 KDF1Q8NAX2 398 aaPredicted RBP6.32□□□□□ -1.4
LINC02540-201ENST00000455554 RNF217Q8TC41 542 aa6.32□□□□□ -1.4
LINC02540-201ENST00000455554 LRRN4Q8WUT4 740 aa6.32□□□□□ -1.4
LINC02540-201ENST00000455554 SLC10A4Q96EP9 437 aa6.32□□□□□ -1.4
LINC02540-201ENST00000455554 KCTD15Q96SI1 283 aaPredicted RBP6.32□□□□□ -1.4
LINC02540-201ENST00000455554 ARHGAP9Q9BRR9 750 aa6.32□□□□□ -1.4
LINC02540-201ENST00000455554 TMPRSS4Q9NRS4 437 aa6.32□□□□□ -1.4
LINC02540-201ENST00000455554 PDE4DQ08499 809 aa6.31□□□□□ -1.4
LINC02540-201ENST00000455554 INTS6LQ5JSJ4 861 aaKnown RBP6.31□□□□□ -1.4
LINC02540-201ENST00000455554 FOXD4L5Q5VV16 416 aaPredicted RBP6.31□□□□□ -1.4
LINC02540-201ENST00000455554 PDXDC2PQ6P474 469 aa6.31□□□□□ -1.4
LINC02540-201ENST00000455554 SV2AQ7L0J3 742 aa6.31□□□□□ -1.4
LINC02540-201ENST00000455554 ADAMTS2O95450 1211 aa6.3□□□□□ -1.4
LINC02540-201ENST00000455554 ADD1P35611 737 aaKnown RBP6.3□□□□□ -1.4
LINC02540-201ENST00000455554 DNMT3AQ9Y6K1 912 aaPredicted RBP6.3□□□□□ -1.4
LINC02540-201ENST00000455554 MARSP56192 900 aaKnown RBP6.29□□□□□ -1.4
LINC02540-201ENST00000455554 ZBTB33Q86T24 672 aa6.29□□□□□ -1.4
LINC02540-201ENST00000455554 POLR3EQ9NVU0 708 aa6.29□□□□□ -1.4
LINC02540-201ENST00000455554 FKBPLQ9UIM3 349 aa6.29□□□□□ -1.4
LINC02540-201ENST00000455554 IGHA1P01876 353 aa6.28□□□□□ -1.4
LINC02540-201ENST00000455554 NR6A1Q15406 480 aa6.28□□□□□ -1.4
LINC02540-201ENST00000455554 KANK3Q6NY19 840 aa6.28□□□□□ -1.4
LINC02540-201ENST00000455554 EPS8L1Q8TE68 723 aa6.28□□□□□ -1.4
LINC02540-201ENST00000455554 RSPH6AQ9H0K4 717 aa6.28□□□□□ -1.4
LINC02540-201ENST00000455554 POLMQ9NP87 494 aaPredicted RBP6.28□□□□□ -1.4
LINC02540-201ENST00000455554 ZC3H4Q9UPT8 1303 aaKnown RBP6.27□□□□□ -1.41
LINC02540-201ENST00000455554 CELA2BP08218 269 aaPredicted RBP6.27□□□□□ -1.41
LINC02540-201ENST00000455554 XP32Q5T750 250 aa6.27□□□□□ -1.41
LINC02540-201ENST00000455554 ZNF784Q8NCA9 323 aaPredicted RBP6.27□□□□□ -1.41
LINC02540-201ENST00000455554 SCARF2Q96GP6 870 aaPredicted RBP6.27□□□□□ -1.41
LINC02540-201ENST00000455554 LILRA1O75019 489 aa6.26□□□□□ -1.41
LINC02540-201ENST00000455554 RAB15P59190 212 aa6.26□□□□□ -1.41
LINC02540-201ENST00000455554 FOXK2Q01167 660 aa6.26□□□□□ -1.41
LINC02540-201ENST00000455554 PTK2Q05397 1052 aa6.26□□□□□ -1.41
LINC02540-201ENST00000455554 CNTNAP5Q8WYK1 1306 aa6.25□□□□□ -1.41
LINC02540-201ENST00000455554 GPR25O00155 361 aa6.25□□□□□ -1.41
LINC02540-201ENST00000455554 RHOQP17081 205 aa6.25□□□□□ -1.41
LINC02540-201ENST00000455554 MAP3K10Q02779 954 aa6.25□□□□□ -1.41
LINC02540-201ENST00000455554 NBPF20Q3BBV1 942 aa6.25□□□□□ -1.41
LINC02540-201ENST00000455554 ADH1AP07327 375 aa6.24□□□□□ -1.41
LINC02540-201ENST00000455554 SRSF11Q05519 484 aaKnown RBP6.24□□□□□ -1.41
LINC02540-201ENST00000455554 PLA2G4EQ3MJ16 856 aa6.24□□□□□ -1.41
LINC02540-201ENST00000455554 ADAM32Q8TC27 787 aa6.24□□□□□ -1.41
LINC02540-201ENST00000455554 GPSM3Q9Y4H4 160 aa6.24□□□□□ -1.41
LINC02540-201ENST00000455554 ERVH48-1M5A8F1 160 aa6.23□□□□□ -1.41
LINC02540-201ENST00000455554 SLC24A3Q9HC58 644 aa6.23□□□□□ -1.41
LINC02540-201ENST00000455554 HMX1Q9NP08 348 aaPredicted RBP6.23□□□□□ -1.41
LINC02540-201ENST00000455554 PTGIRP43119 386 aa6.22□□□□□ -1.41
LINC02540-201ENST00000455554 LYSMD3Q7Z3D4 306 aa6.22□□□□□ -1.41
LINC02540-201ENST00000455554 PRICKLE2Q7Z3G6 844 aa6.22□□□□□ -1.41
LINC02540-201ENST00000455554 PROCA1Q8NCQ7 364 aaPredicted RBP6.22□□□□□ -1.41
LINC02540-201ENST00000455554 ZNF837Q96EG3 531 aaPredicted RBP6.22□□□□□ -1.41
LINC02540-201ENST00000455554 DCAF5Q96JK2 942 aa6.22□□□□□ -1.41
LINC02540-201ENST00000455554 PROCP04070 461 aa6.21□□□□□ -1.42
LINC02540-201ENST00000455554 SPOCK3Q9BQ16 436 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms