RNA–Protein interactions for RNA: ENST00000455385.6

SYPL1-202, Transcript of synaptophysin like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYPL1, Length 2,151 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-202ENST00000455385 ILDR1Q86SU0 546 aaPredicted RBP14.49□□□□□ -0.09
SYPL1-202ENST00000455385 COL18A1P39060 1754 aa14.49□□□□□ -0.09
SYPL1-202ENST00000455385 INSRP06213 1382 aa14.47□□□□□ -0.09
SYPL1-202ENST00000455385 FLT4P35916 1363 aa14.47□□□□□ -0.09
SYPL1-202ENST00000455385 KIF24Q5T7B8 1368 aa14.46□□□□□ -0.09
SYPL1-202ENST00000455385 RGPD5Q99666 1765 aa14.46□□□□□ -0.09
SYPL1-202ENST00000455385 CAMTA1Q9Y6Y1 1673 aa14.46□□□□□ -0.1
SYPL1-202ENST00000455385 CDK12Q9NYV4 1490 aaPredicted RBP14.46□□□□□ -0.1
SYPL1-202ENST00000455385 RTL1A6NKG5 1358 aa14.45□□□□□ -0.1
SYPL1-202ENST00000455385 LTV1Q96GA3 475 aaPredicted RBP14.45□□□□□ -0.1
SYPL1-202ENST00000455385 LMO7Q8WWI1 1683 aa14.45□□□□□ -0.1
SYPL1-202ENST00000455385 COL3A1P02461 1466 aaPredicted RBP14.45□□□□□ -0.1
SYPL1-202ENST00000455385 EIF4A2Q14240 407 aaKnown RBP14.44□□□□□ -0.1
SYPL1-202ENST00000455385 C8orf37Q96NL8 207 aa14.44□□□□□ -0.1
SYPL1-202ENST00000455385 BTG4Q9NY30 223 aa14.44□□□□□ -0.1
SYPL1-202ENST00000455385 CCER2I3L3R5 266 aa14.44□□□□□ -0.1
SYPL1-202ENST00000455385 IL13P35225 146 aa14.44□□□□□ -0.1
SYPL1-202ENST00000455385 NGLY1Q96IV0 654 aa14.44□□□□□ -0.1
SYPL1-202ENST00000455385 MRS2Q9HD23 443 aa14.44□□□□□ -0.1
SYPL1-202ENST00000455385 ANKRD24Q8TF21 1146 aa14.43□□□□□ -0.1
SYPL1-202ENST00000455385 CFAP53Q96M91 514 aa14.43□□□□□ -0.1
SYPL1-202ENST00000455385 DIAPH1O60610 1272 aaKnown RBP14.43□□□□□ -0.1
SYPL1-202ENST00000455385 COL14A1Q05707 1796 aaKnown RBP14.43□□□□□ -0.1
SYPL1-202ENST00000455385 BLMP54132 1417 aaPredicted RBP14.42□□□□□ -0.1
SYPL1-202ENST00000455385 MEX3CQ5U5Q3 659 aaKnown RBP14.42□□□□□ -0.1
SYPL1-202ENST00000455385 FNBP4Q8N3X1 1017 aaPredicted RBP14.42□□□□□ -0.1
SYPL1-202ENST00000455385 ERBB3P21860 1342 aa14.42□□□□□ -0.1
SYPL1-202ENST00000455385 SLIT2O94813 1529 aa14.41□□□□□ -0.1
SYPL1-202ENST00000455385 ABCC6O95255 1503 aa14.41□□□□□ -0.1
SYPL1-202ENST00000455385 PNISRQ8TF01 805 aaKnown RBP14.41□□□□□ -0.1
SYPL1-202ENST00000455385 STRN4Q9NRL3 753 aa14.41□□□□□ -0.1
SYPL1-202ENST00000455385 COL5A2P05997 1499 aaPredicted RBP14.41□□□□□ -0.1
SYPL1-202ENST00000455385 NBPF6Q5VWK0 638 aa14.4□□□□□ -0.1
SYPL1-202ENST00000455385 NBPF4Q96M43 638 aa14.4□□□□□ -0.1
SYPL1-202ENST00000455385 EYA1Q99502 592 aa14.4□□□□□ -0.1
SYPL1-202ENST00000455385 PLCH1Q4KWH8 1693 aa14.4□□□□□ -0.1
SYPL1-202ENST00000455385 EVA1CP58658 441 aa14.4□□□□□ -0.1
SYPL1-202ENST00000455385 LARP1Q6PKG0 1096 aaKnown RBP14.4□□□□□ -0.1
SYPL1-202ENST00000455385 BCL9LQ86UU0 1499 aa14.4□□□□□ -0.1
SYPL1-202ENST00000455385 U2SURPO15042 1029 aaKnown RBP14.39□□□□□ -0.11
SYPL1-202ENST00000455385 CSB-PGBD3P0DP91 1061 aa14.39□□□□□ -0.11
SYPL1-202ENST00000455385 WDR17Q8IZU2 1322 aa14.38□□□□□ -0.11
SYPL1-202ENST00000455385 RGPD2P0DJD1 1756 aa14.38□□□□□ -0.11
SYPL1-202ENST00000455385 UNC5CLQ8IV45 518 aa14.38□□□□□ -0.11
SYPL1-202ENST00000455385 AFF2P51816 1311 aa14.38□□□□□ -0.11
SYPL1-202ENST00000455385 USHBP1Q8N6Y0 703 aa14.37□□□□□ -0.11
SYPL1-202ENST00000455385 NLRP2Q9NX02 1062 aa14.37□□□□□ -0.11
SYPL1-202ENST00000455385 USP21Q9UK80 565 aa14.37□□□□□ -0.11
SYPL1-202ENST00000455385 ADAMTS8Q9UP79 889 aa14.37□□□□□ -0.11
SYPL1-202ENST00000455385 NUDCQ9Y266 331 aa14.37□□□□□ -0.11
SYPL1-202ENST00000455385 AEBP1Q8IUX7 1158 aa14.37□□□□□ -0.11
SYPL1-202ENST00000455385 NWD2Q9ULI1 1742 aa14.37□□□□□ -0.11
SYPL1-202ENST00000455385 NRAPQ86VF7 1730 aa14.36□□□□□ -0.11
SYPL1-202ENST00000455385 U2AF1L5P0DN76 240 aaPredicted RBP14.36□□□□□ -0.11
SYPL1-202ENST00000455385 U2AF1Q01081 240 aaKnown RBP eCLIP14.36□□□□□ -0.11
SYPL1-202ENST00000455385 TOM1L2Q6ZVM7 507 aa14.36□□□□□ -0.11
SYPL1-202ENST00000455385 IGSF1Q8N6C5 1336 aa14.36□□□□□ -0.11
SYPL1-202ENST00000455385 HMOX1P09601 288 aa14.36□□□□□ -0.11
SYPL1-202ENST00000455385 RGPD1P0DJD0 1748 aa14.35□□□□□ -0.11
SYPL1-202ENST00000455385 SULT6B1Q6IMI4 303 aa14.35□□□□□ -0.11
SYPL1-202ENST00000455385 FAM9BQ8IZU0 186 aa14.35□□□□□ -0.11
SYPL1-202ENST00000455385 CARD10Q9BWT7 1032 aa14.34□□□□□ -0.11
SYPL1-202ENST00000455385 WDR43Q15061 677 aaKnown RBP eCLIP14.34□□□□□ -0.11
SYPL1-202ENST00000455385 USP35Q9P2H5 1018 aa14.34□□□□□ -0.11
SYPL1-202ENST00000455385 CRB1P82279 1406 aa14.33□□□□□ -0.11
SYPL1-202ENST00000455385 VPS72Q15906 364 aa14.33□□□□□ -0.11
SYPL1-202ENST00000455385 SPATA31A5Q5VU36 1347 aa14.33□□□□□ -0.12
SYPL1-202ENST00000455385 SPATA31A7Q8IWB4 1347 aa14.33□□□□□ -0.12
SYPL1-202ENST00000455385 RSPH6AQ9H0K4 717 aa14.33□□□□□ -0.12
SYPL1-202ENST00000455385 RGS17Q9UGC6 210 aaPredicted RBP14.33□□□□□ -0.12
SYPL1-202ENST00000455385 NCAPD2Q15021 1401 aa14.32□□□□□ -0.12
SYPL1-202ENST00000455385 SPATA31A1Q5TZJ5 1347 aa14.32□□□□□ -0.12
SYPL1-202ENST00000455385 KDRP35968 1356 aa14.32□□□□□ -0.12
SYPL1-202ENST00000455385 FCHSD2O94868 740 aa14.32□□□□□ -0.12
SYPL1-202ENST00000455385 QTRT2Q9H974 415 aaKnown RBP14.32□□□□□ -0.12
SYPL1-202ENST00000455385 FAM208AQ9UK61 1670 aaKnown RBP14.31□□□□□ -0.12
SYPL1-202ENST00000455385 CCDC9Q9Y3X0 531 aaKnown RBP14.31□□□□□ -0.12
SYPL1-202ENST00000455385 PRKAR2BP31323 418 aa14.3□□□□□ -0.12
SYPL1-202ENST00000455385 PLEKHF1Q96S99 279 aa14.3□□□□□ -0.12
SYPL1-202ENST00000455385 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.3□□□□□ -0.12
SYPL1-202ENST00000455385 ATRNO75882 1429 aa14.3□□□□□ -0.12
SYPL1-202ENST00000455385 CCDC146Q8IYE0 955 aa14.3□□□□□ -0.12
SYPL1-202ENST00000455385 TCP11L2Q8N4U5 519 aa14.3□□□□□ -0.12
SYPL1-202ENST00000455385 PHACTR3Q96KR7 559 aa14.3□□□□□ -0.12
SYPL1-202ENST00000455385 TRPC5Q9UL62 973 aaPredicted RBP14.3□□□□□ -0.12
SYPL1-202ENST00000455385 GJD4Q96KN9 370 aaPredicted RBP14.29□□□□□ -0.12
SYPL1-202ENST00000455385 ZNF772Q68DY9 489 aaPredicted RBP14.28□□□□□ -0.12
SYPL1-202ENST00000455385 SENP3-EIF4A1A0A087X0R7 540 aa14.27□□□□□ -0.12
SYPL1-202ENST00000455385 MEGF6O75095 1541 aa14.27□□□□□ -0.12
SYPL1-202ENST00000455385 THRAP3Q9Y2W1 955 aaKnown RBP14.27□□□□□ -0.13
SYPL1-202ENST00000455385 IL2RBP14784 551 aa14.26□□□□□ -0.13
SYPL1-202ENST00000455385 FAM98CQ17RN3 349 aaKnown RBP14.26□□□□□ -0.13
SYPL1-202ENST00000455385 BARGINQ6ZT62 677 aa14.26□□□□□ -0.13
SYPL1-202ENST00000455385 RAPGEF4Q8WZA2 1011 aa14.26□□□□□ -0.13
SYPL1-202ENST00000455385 RUNDC1Q96C34 613 aa14.26□□□□□ -0.13
SYPL1-202ENST00000455385 GLI3P10071 1580 aa14.26□□□□□ -0.13
SYPL1-202ENST00000455385 POTEAQ6S8J7 498 aa14.26□□□□□ -0.13
SYPL1-202ENST00000455385 DISP2A7MBM2 1401 aa14.26□□□□□ -0.13
SYPL1-202ENST00000455385 TATP17735 454 aaPredicted RBP14.25□□□□□ -0.13
SYPL1-202ENST00000455385 PHF23Q9BUL5 403 aaPredicted RBP14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms