RNA–Protein interactions for RNA: ENST00000455144.6

XPC-204, Transcript of XPC complex subunit, DNA damage recognition and repair factor, humanhuman

TSL 4

Gene XPC, Length 958 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPC-204ENST00000455144 NRKQ7Z2Y5 1582 aa9.8□□□□□ -0.84
XPC-204ENST00000455144 UPF1Q92900 1129 aaKnown RBP eCLIP9.8□□□□□ -0.84
XPC-204ENST00000455144 TESK2Q96S53 571 aa9.8□□□□□ -0.84
XPC-204ENST00000455144 SLIT3O75094 1523 aa9.8□□□□□ -0.84
XPC-204ENST00000455144 EDC4Q6P2E9 1401 aaKnown RBP9.8□□□□□ -0.84
XPC-204ENST00000455144 PIK3C2AO00443 1686 aa9.8□□□□□ -0.84
XPC-204ENST00000455144 USP54Q70EL1 1684 aa9.8□□□□□ -0.84
XPC-204ENST00000455144 BRWD3Q6RI45 1802 aa9.79□□□□□ -0.84
XPC-204ENST00000455144 A0A0G2JS52 829 aa9.79□□□□□ -0.84
XPC-204ENST00000455144 C11orf95C9JLR9 678 aaPredicted RBP9.79□□□□□ -0.84
XPC-204ENST00000455144 MYT1Q01538 1121 aa9.79□□□□□ -0.84
XPC-204ENST00000455144 THRAP3Q9Y2W1 955 aaKnown RBP9.79□□□□□ -0.84
XPC-204ENST00000455144 SPATA31A5Q5VU36 1347 aa9.79□□□□□ -0.84
XPC-204ENST00000455144 SPATA31A7Q8IWB4 1347 aa9.79□□□□□ -0.84
XPC-204ENST00000455144 AATKQ6ZMQ8 1374 aa9.78□□□□□ -0.84
XPC-204ENST00000455144 USP31Q70CQ4 1352 aa9.78□□□□□ -0.84
XPC-204ENST00000455144 ABCC6O95255 1503 aa9.78□□□□□ -0.84
XPC-204ENST00000455144 EIF4G2P78344 907 aaKnown RBP eCLIP9.78□□□□□ -0.84
XPC-204ENST00000455144 SF3B2Q13435 895 aaKnown RBP9.78□□□□□ -0.84
XPC-204ENST00000455144 SEPT12Q8IYM1 358 aa9.78□□□□□ -0.84
XPC-204ENST00000455144 SLC12A5Q9H2X9 1139 aa9.78□□□□□ -0.84
XPC-204ENST00000455144 LMO7Q8WWI1 1683 aa9.77□□□□□ -0.84
XPC-204ENST00000455144 CHRNA2Q15822 529 aa9.77□□□□□ -0.85
XPC-204ENST00000455144 KRT27Q7Z3Y8 459 aa9.77□□□□□ -0.85
XPC-204ENST00000455144 STRN4Q9NRL3 753 aa9.77□□□□□ -0.85
XPC-204ENST00000455144 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.76□□□□□ -0.85
XPC-204ENST00000455144 CDCA7Q9BWT1 371 aaPredicted RBP9.76□□□□□ -0.85
XPC-204ENST00000455144 SPATA31A1Q5TZJ5 1347 aa9.76□□□□□ -0.85
XPC-204ENST00000455144 ANKRD36BQ8N2N9 1353 aa9.75□□□□□ -0.85
XPC-204ENST00000455144 LTN1O94822 1766 aa9.75□□□□□ -0.85
XPC-204ENST00000455144 RGPD5Q99666 1765 aa9.75□□□□□ -0.85
XPC-204ENST00000455144 CAMTA1Q9Y6Y1 1673 aa9.75□□□□□ -0.85
XPC-204ENST00000455144 ZBTB7CA1YPR0 619 aa9.75□□□□□ -0.85
XPC-204ENST00000455144 FAM98CQ17RN3 349 aaKnown RBP9.75□□□□□ -0.85
XPC-204ENST00000455144 BARGINQ6ZT62 677 aa9.75□□□□□ -0.85
XPC-204ENST00000455144 ARHGEF25Q86VW2 580 aa9.75□□□□□ -0.85
XPC-204ENST00000455144 COG3Q96JB2 828 aa9.75□□□□□ -0.85
XPC-204ENST00000455144 COL18A1P39060 1754 aa9.75□□□□□ -0.85
XPC-204ENST00000455144 A0A1W2PP64 1363 aa9.75□□□□□ -0.85
XPC-204ENST00000455144 CRB1P82279 1406 aa9.74□□□□□ -0.85
XPC-204ENST00000455144 CD163L1Q9NR16 1453 aa9.74□□□□□ -0.85
XPC-204ENST00000455144 TCP11L2Q8N4U5 519 aa9.74□□□□□ -0.85
XPC-204ENST00000455144 KIF20BQ96Q89 1820 aa9.73□□□□□ -0.85
XPC-204ENST00000455144 CSB-PGBD3P0DP91 1061 aa9.73□□□□□ -0.85
XPC-204ENST00000455144 PDE3BQ13370 1112 aa9.73□□□□□ -0.85
XPC-204ENST00000455144 TOM1L2Q6ZVM7 507 aa9.73□□□□□ -0.85
XPC-204ENST00000455144 WDR17Q8IZU2 1322 aa9.73□□□□□ -0.85
XPC-204ENST00000455144 FAM208AQ9UK61 1670 aaKnown RBP9.73□□□□□ -0.85
XPC-204ENST00000455144 THSD7AQ9UPZ6 1657 aa9.73□□□□□ -0.85
XPC-204ENST00000455144 RGPD1P0DJD0 1748 aa9.73□□□□□ -0.85
XPC-204ENST00000455144 PARP4Q9UKK3 1724 aaKnown RBP9.73□□□□□ -0.85
XPC-204ENST00000455144 BLMP54132 1417 aaPredicted RBP9.73□□□□□ -0.85
XPC-204ENST00000455144 COL5A2P05997 1499 aaPredicted RBP9.72□□□□□ -0.85
XPC-204ENST00000455144 FAM196AQ6ZSG2 479 aa9.72□□□□□ -0.85
XPC-204ENST00000455144 NME9Q86XW9 330 aa9.72□□□□□ -0.85
XPC-204ENST00000455144 CCDC7Q96M83 1385 aa9.72□□□□□ -0.85
XPC-204ENST00000455144 NFAT5O94916 1531 aa9.72□□□□□ -0.85
XPC-204ENST00000455144 SOX12O15370 315 aa9.71□□□□□ -0.86
XPC-204ENST00000455144 LARP1Q6PKG0 1096 aaKnown RBP9.71□□□□□ -0.86
XPC-204ENST00000455144 AKT1S1Q96B36 256 aa9.71□□□□□ -0.86
XPC-204ENST00000455144 CARD10Q9BWT7 1032 aa9.71□□□□□ -0.86
XPC-204ENST00000455144 USP35Q9P2H5 1018 aa9.71□□□□□ -0.86
XPC-204ENST00000455144 OVOS2A0A0J9YW53 1432 aa9.71□□□□□ -0.86
XPC-204ENST00000455144 OVOS2Q6IE36 1432 aa9.71□□□□□ -0.86
XPC-204ENST00000455144 WNK3Q9BYP7 1800 aa9.7□□□□□ -0.86
XPC-204ENST00000455144 BAG6P46379 1132 aa9.7□□□□□ -0.86
XPC-204ENST00000455144 MYOM1P52179 1685 aa9.7□□□□□ -0.86
XPC-204ENST00000455144 HSPA5P11021 654 aaKnown RBP9.69□□□□□ -0.86
XPC-204ENST00000455144 AMPHP49418 695 aa9.69□□□□□ -0.86
XPC-204ENST00000455144 VASPP50552 380 aaPredicted RBP9.69□□□□□ -0.86
XPC-204ENST00000455144 DDB1Q16531 1140 aa9.69□□□□□ -0.86
XPC-204ENST00000455144 KIF24Q5T7B8 1368 aa9.69□□□□□ -0.86
XPC-204ENST00000455144 IP6K1Q92551 441 aa9.69□□□□□ -0.86
XPC-204ENST00000455144 KAT6BQ8WYB5 2073 aa9.68□□□□□ -0.86
XPC-204ENST00000455144 RTL1A6NKG5 1358 aa9.68□□□□□ -0.86
XPC-204ENST00000455144 CGNL1Q0VF96 1302 aa9.68□□□□□ -0.86
XPC-204ENST00000455144 ZRANB1Q9UGI0 708 aa9.68□□□□□ -0.86
XPC-204ENST00000455144 MAP2P11137 1827 aaKnown RBP9.68□□□□□ -0.86
XPC-204ENST00000455144 SMG6Q86US8 1419 aaKnown RBP9.67□□□□□ -0.86
XPC-204ENST00000455144 EXOC5O00471 708 aa9.67□□□□□ -0.86
XPC-204ENST00000455144 FYB1O15117 783 aa9.67□□□□□ -0.86
XPC-204ENST00000455144 POLR3GLQ9BT43 218 aa9.67□□□□□ -0.86
XPC-204ENST00000455144 AXIN2Q9Y2T1 843 aa9.67□□□□□ -0.86
XPC-204ENST00000455144 ANKRD26Q9UPS8 1709 aa9.67□□□□□ -0.86
XPC-204ENST00000455144 ERBB3P21860 1342 aa9.66□□□□□ -0.86
XPC-204ENST00000455144 SPDYE2BA6NHP3 402 aa9.66□□□□□ -0.86
XPC-204ENST00000455144 SPDYE6P0CI01 402 aa9.66□□□□□ -0.86
XPC-204ENST00000455144 SPDYE2Q495Y8 402 aa9.66□□□□□ -0.86
XPC-204ENST00000455144 CHRDL2Q6WN34 429 aa9.66□□□□□ -0.86
XPC-204ENST00000455144 ANKRD24Q8TF21 1146 aa9.66□□□□□ -0.86
XPC-204ENST00000455144 NLRP2Q9NX02 1062 aa9.66□□□□□ -0.86
XPC-204ENST00000455144 SBF2Q86WG5 1849 aa9.66□□□□□ -0.86
XPC-204ENST00000455144 OVOS2A0A0G2JMS6 1433 aa9.65□□□□□ -0.86
XPC-204ENST00000455144 NSD3Q9BZ95 1437 aa9.65□□□□□ -0.86
XPC-204ENST00000455144 PARD3Q8TEW0 1356 aa9.65□□□□□ -0.86
XPC-204ENST00000455144 GGNBP2Q9H3C7 697 aa9.65□□□□□ -0.86
XPC-204ENST00000455144 NSD2O96028 1365 aa9.64□□□□□ -0.87
XPC-204ENST00000455144 LRRC37A3O60309 1634 aa9.64□□□□□ -0.87
XPC-204ENST00000455144 MAP3K19Q56UN5 1328 aa9.64□□□□□ -0.87
XPC-204ENST00000455144 IL2RBP14784 551 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms