RNA–Protein interactions for RNA: ENST00000454952.1

NIF3L1-209, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-209ENST00000454952 CABP2Q9NPB3 220 aa11.53□□□□□ -0.56
NIF3L1-209ENST00000454952 EVC2Q86UK5 1308 aa11.53□□□□□ -0.56
NIF3L1-209ENST00000454952 NUP188Q5SRE5 1749 aa11.52□□□□□ -0.56
NIF3L1-209ENST00000454952 RGPD3A6NKT7 1758 aaPredicted RBP11.52□□□□□ -0.57
NIF3L1-209ENST00000454952 RGPD4Q7Z3J3 1758 aa11.52□□□□□ -0.57
NIF3L1-209ENST00000454952 NLRP6P59044 892 aa11.52□□□□□ -0.57
NIF3L1-209ENST00000454952 ZNF692Q9BU19 519 aaPredicted RBP11.52□□□□□ -0.57
NIF3L1-209ENST00000454952 CDCA7Q9BWT1 371 aaPredicted RBP11.52□□□□□ -0.57
NIF3L1-209ENST00000454952 OVOS2A0A0G2JMS6 1433 aa11.52□□□□□ -0.57
NIF3L1-209ENST00000454952 OVOS2A0A0J9YW53 1432 aa11.52□□□□□ -0.57
NIF3L1-209ENST00000454952 OVOS2Q6IE36 1432 aa11.52□□□□□ -0.57
NIF3L1-209ENST00000454952 SLIT3O75094 1523 aa11.51□□□□□ -0.57
NIF3L1-209ENST00000454952 CAPN15O75808 1086 aa11.51□□□□□ -0.57
NIF3L1-209ENST00000454952 CABP1Q9NZU7 370 aa11.51□□□□□ -0.57
NIF3L1-209ENST00000454952 TRPM1Q7Z4N2 1603 aa11.5□□□□□ -0.57
NIF3L1-209ENST00000454952 KCNH5Q8NCM2 988 aa11.5□□□□□ -0.57
NIF3L1-209ENST00000454952 SBF2Q86WG5 1849 aa11.49□□□□□ -0.57
NIF3L1-209ENST00000454952 ZBTB7CA1YPR0 619 aa11.49□□□□□ -0.57
NIF3L1-209ENST00000454952 DDB1Q16531 1140 aa11.49□□□□□ -0.57
NIF3L1-209ENST00000454952 TOM1L2Q6ZVM7 507 aa11.49□□□□□ -0.57
NIF3L1-209ENST00000454952 TTC21AQ8NDW8 1320 aa11.49□□□□□ -0.57
NIF3L1-209ENST00000454952 PIK3C2AO00443 1686 aa11.49□□□□□ -0.57
NIF3L1-209ENST00000454952 AKAP12Q02952 1782 aa11.49□□□□□ -0.57
NIF3L1-209ENST00000454952 WNK3Q9BYP7 1800 aa11.49□□□□□ -0.57
NIF3L1-209ENST00000454952 PLSCR1O15162 318 aa11.48□□□□□ -0.57
NIF3L1-209ENST00000454952 SPON1Q9HCB6 807 aa11.48□□□□□ -0.57
NIF3L1-209ENST00000454952 WDR17Q8IZU2 1322 aa11.48□□□□□ -0.57
NIF3L1-209ENST00000454952 LRRC37A3O60309 1634 aa11.48□□□□□ -0.57
NIF3L1-209ENST00000454952 PEAK1Q9H792 1746 aa11.48□□□□□ -0.57
NIF3L1-209ENST00000454952 COL18A1P39060 1754 aa11.48□□□□□ -0.57
NIF3L1-209ENST00000454952 ABCC6O95255 1503 aa11.47□□□□□ -0.57
NIF3L1-209ENST00000454952 BCL9O00512 1426 aa11.47□□□□□ -0.57
NIF3L1-209ENST00000454952 CPSF1Q10570 1443 aaKnown RBP11.47□□□□□ -0.57
NIF3L1-209ENST00000454952 ROCK2O75116 1388 aaKnown RBP11.47□□□□□ -0.57
NIF3L1-209ENST00000454952 L3MBTL2Q969R5 705 aa11.47□□□□□ -0.57
NIF3L1-209ENST00000454952 PPP1R1BQ9UD71 204 aaPredicted RBP11.47□□□□□ -0.57
NIF3L1-209ENST00000454952 BCL11BQ9C0K0 894 aaPredicted RBP11.46□□□□□ -0.57
NIF3L1-209ENST00000454952 NINLQ9Y2I6 1382 aa11.45□□□□□ -0.58
NIF3L1-209ENST00000454952 TTC21BQ7Z4L5 1316 aa11.45□□□□□ -0.58
NIF3L1-209ENST00000454952 KCNQ2O43526 872 aa11.45□□□□□ -0.58
NIF3L1-209ENST00000454952 CSB-PGBD3P0DP91 1061 aa11.45□□□□□ -0.58
NIF3L1-209ENST00000454952 DSG3P32926 999 aa11.45□□□□□ -0.58
NIF3L1-209ENST00000454952 ARHGEF25Q86VW2 580 aa11.45□□□□□ -0.58
NIF3L1-209ENST00000454952 CARD10Q9BWT7 1032 aa11.45□□□□□ -0.58
NIF3L1-209ENST00000454952 CCDC7Q96M83 1385 aa11.44□□□□□ -0.58
NIF3L1-209ENST00000454952 RGPD5Q99666 1765 aa11.44□□□□□ -0.58
NIF3L1-209ENST00000454952 KTN1Q86UP2 1357 aaKnown RBP11.43□□□□□ -0.58
NIF3L1-209ENST00000454952 SPINK5Q9NQ38 1064 aaPredicted RBP11.43□□□□□ -0.58
NIF3L1-209ENST00000454952 MON2Q7Z3U7 1717 aa11.43□□□□□ -0.58
NIF3L1-209ENST00000454952 SBNO2Q9Y2G9 1366 aa11.42□□□□□ -0.58
NIF3L1-209ENST00000454952 EXOC5O00471 708 aa11.42□□□□□ -0.58
NIF3L1-209ENST00000454952 FKBP8Q14318 412 aa11.42□□□□□ -0.58
NIF3L1-209ENST00000454952 ZNF219Q9P2Y4 722 aaPredicted RBP11.42□□□□□ -0.58
NIF3L1-209ENST00000454952 AXIN2Q9Y2T1 843 aa11.42□□□□□ -0.58
NIF3L1-209ENST00000454952 NFAT5O94916 1531 aa11.41□□□□□ -0.58
NIF3L1-209ENST00000454952 USP54Q70EL1 1684 aa11.41□□□□□ -0.58
NIF3L1-209ENST00000454952 MARCH10Q8NA82 808 aaPredicted RBP11.41□□□□□ -0.58
NIF3L1-209ENST00000454952 SOX12O15370 315 aa11.4□□□□□ -0.58
NIF3L1-209ENST00000454952 YY1P25490 414 aa11.4□□□□□ -0.58
NIF3L1-209ENST00000454952 NEUROD1Q13562 356 aa11.4□□□□□ -0.58
NIF3L1-209ENST00000454952 STK32BQ9NY57 414 aa11.4□□□□□ -0.58
NIF3L1-209ENST00000454952 CASZ1Q86V15 1759 aa11.4□□□□□ -0.58
NIF3L1-209ENST00000454952 TNS2Q63HR2 1409 aa11.4□□□□□ -0.58
NIF3L1-209ENST00000454952 USP31Q70CQ4 1352 aa11.4□□□□□ -0.59
NIF3L1-209ENST00000454952 HDGFL2Q7Z4V5 671 aaPredicted RBP11.39□□□□□ -0.59
NIF3L1-209ENST00000454952 KAT6BQ8WYB5 2073 aa11.39□□□□□ -0.59
NIF3L1-209ENST00000454952 LTN1O94822 1766 aa11.39□□□□□ -0.59
NIF3L1-209ENST00000454952 SIN3AQ96ST3 1273 aa11.38□□□□□ -0.59
NIF3L1-209ENST00000454952 NHSQ6T4R5 1651 aa11.38□□□□□ -0.59
NIF3L1-209ENST00000454952 SLC24A1O60721 1099 aa11.37□□□□□ -0.59
NIF3L1-209ENST00000454952 TXNRD1Q16881 649 aa11.37□□□□□ -0.59
NIF3L1-209ENST00000454952 PUS7Q96PZ0 661 aaKnown RBP11.37□□□□□ -0.59
NIF3L1-209ENST00000454952 CARD11Q9BXL7 1154 aa11.37□□□□□ -0.59
NIF3L1-209ENST00000454952 ANO8Q9HCE9 1232 aaPredicted RBP11.37□□□□□ -0.59
NIF3L1-209ENST00000454952 TERF2IPQ9NYB0 399 aa11.37□□□□□ -0.59
NIF3L1-209ENST00000454952 ERBB3P21860 1342 aa11.36□□□□□ -0.59
NIF3L1-209ENST00000454952 EDC4Q6P2E9 1401 aaKnown RBP11.36□□□□□ -0.59
NIF3L1-209ENST00000454952 IL2RBP14784 551 aa11.36□□□□□ -0.59
NIF3L1-209ENST00000454952 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.36□□□□□ -0.59
NIF3L1-209ENST00000454952 TMC1Q8TDI8 760 aa11.36□□□□□ -0.59
NIF3L1-209ENST00000454952 NLRP2Q9NX02 1062 aa11.36□□□□□ -0.59
NIF3L1-209ENST00000454952 FAM208AQ9UK61 1670 aaKnown RBP11.36□□□□□ -0.59
NIF3L1-209ENST00000454952 SLC15A2Q16348 729 aa11.35□□□□□ -0.59
NIF3L1-209ENST00000454952 PROM2Q8N271 834 aa11.35□□□□□ -0.59
NIF3L1-209ENST00000454952 MTFR1LQ9H019 292 aa11.35□□□□□ -0.59
NIF3L1-209ENST00000454952 ZBTB7AO95365 584 aa11.34□□□□□ -0.59
NIF3L1-209ENST00000454952 PTF1AQ7RTS3 328 aa11.34□□□□□ -0.59
NIF3L1-209ENST00000454952 NME9Q86XW9 330 aa11.34□□□□□ -0.59
NIF3L1-209ENST00000454952 CD163L1Q9NR16 1453 aa11.33□□□□□ -0.6
NIF3L1-209ENST00000454952 BTAF1O14981 1849 aa11.33□□□□□ -0.6
NIF3L1-209ENST00000454952 TONSLQ96HA7 1378 aa11.33□□□□□ -0.6
NIF3L1-209ENST00000454952 ANKRD24Q8TF21 1146 aa11.33□□□□□ -0.6
NIF3L1-209ENST00000454952 MYOM1P52179 1685 aa11.33□□□□□ -0.6
NIF3L1-209ENST00000454952 PTGER2P43116 358 aa11.32□□□□□ -0.6
NIF3L1-209ENST00000454952 CHD4Q14839 1912 aa11.31□□□□□ -0.6
NIF3L1-209ENST00000454952 SLC12A5Q9H2X9 1139 aa11.31□□□□□ -0.6
NIF3L1-209ENST00000454952 A0A1W2PP64 1363 aa11.3□□□□□ -0.6
NIF3L1-209ENST00000454952 HMGB2P26583 209 aaKnown RBP11.3□□□□□ -0.6
NIF3L1-209ENST00000454952 SLC27A3Q5K4L6 730 aa11.3□□□□□ -0.6
NIF3L1-209ENST00000454952 IP6K1Q92551 441 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms