RNA–Protein interactions for RNA: ENST00000451405.1

RPUSD3-209, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 5

Gene RPUSD3, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-209ENST00000451405 COL18A1P39060 1754 aa23.28■■□□□ 1.32
RPUSD3-209ENST00000451405 SOX12O15370 315 aa23.28■■□□□ 1.32
RPUSD3-209ENST00000451405 ARHGEF25Q86VW2 580 aa23.28■■□□□ 1.32
RPUSD3-209ENST00000451405 SLC12A5Q9H2X9 1139 aa23.28■■□□□ 1.32
RPUSD3-209ENST00000451405 THRAP3Q9Y2W1 955 aaKnown RBP23.28■■□□□ 1.32
RPUSD3-209ENST00000451405 TMC1Q8TDI8 760 aa23.27■■□□□ 1.32
RPUSD3-209ENST00000451405 CD163L1Q9NR16 1453 aa23.27■■□□□ 1.32
RPUSD3-209ENST00000451405 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.26■■□□□ 1.31
RPUSD3-209ENST00000451405 CRB1P82279 1406 aa23.25■■□□□ 1.31
RPUSD3-209ENST00000451405 ST20-MTHFSA0A0A6YYL1 179 aa23.24■■□□□ 1.31
RPUSD3-209ENST00000451405 KCNH5Q8NCM2 988 aa23.24■■□□□ 1.31
RPUSD3-209ENST00000451405 TESK2Q96S53 571 aa23.24■■□□□ 1.31
RPUSD3-209ENST00000451405 MON2Q7Z3U7 1717 aa23.24■■□□□ 1.31
RPUSD3-209ENST00000451405 NME9Q86XW9 330 aa23.23■■□□□ 1.31
RPUSD3-209ENST00000451405 TOM1L2Q6ZVM7 507 aa23.22■■□□□ 1.31
RPUSD3-209ENST00000451405 RGPD5Q99666 1765 aa23.22■■□□□ 1.31
RPUSD3-209ENST00000451405 BCL11BQ9C0K0 894 aaPredicted RBP23.21■■□□□ 1.31
RPUSD3-209ENST00000451405 RREB1Q92766 1687 aa23.21■■□□□ 1.31
RPUSD3-209ENST00000451405 NUP188Q5SRE5 1749 aa23.2■■□□□ 1.3
RPUSD3-209ENST00000451405 WDR17Q8IZU2 1322 aa23.2■■□□□ 1.3
RPUSD3-209ENST00000451405 PLSCR1O15162 318 aa23.2■■□□□ 1.3
RPUSD3-209ENST00000451405 HDGFL2Q7Z4V5 671 aaPredicted RBP23.2■■□□□ 1.3
RPUSD3-209ENST00000451405 PUS7Q96PZ0 661 aaKnown RBP23.2■■□□□ 1.3
RPUSD3-209ENST00000451405 NFAT5O94916 1531 aa23.19■■□□□ 1.3
RPUSD3-209ENST00000451405 USP31Q70CQ4 1352 aa23.19■■□□□ 1.3
RPUSD3-209ENST00000451405 PARP4Q9UKK3 1724 aaKnown RBP23.18■■□□□ 1.3
RPUSD3-209ENST00000451405 ZBTB7AO95365 584 aa23.17■■□□□ 1.3
RPUSD3-209ENST00000451405 DDB1Q16531 1140 aa23.17■■□□□ 1.3
RPUSD3-209ENST00000451405 A0A1W2PP64 1363 aa23.16■■□□□ 1.3
RPUSD3-209ENST00000451405 TERF2IPQ9NYB0 399 aa23.16■■□□□ 1.3
RPUSD3-209ENST00000451405 OVOS2A0A0G2JMS6 1433 aa23.16■■□□□ 1.3
RPUSD3-209ENST00000451405 OVOS2A0A0J9YW53 1432 aa23.16■■□□□ 1.3
RPUSD3-209ENST00000451405 OVOS2Q6IE36 1432 aa23.16■■□□□ 1.3
RPUSD3-209ENST00000451405 ZNF784Q8NCA9 323 aaPredicted RBP23.15■■□□□ 1.3
RPUSD3-209ENST00000451405 ATF5Q9Y2D1 282 aaPredicted RBP23.15■■□□□ 1.3
RPUSD3-209ENST00000451405 CSB-PGBD3P0DP91 1061 aa23.14■■□□□ 1.29
RPUSD3-209ENST00000451405 CARD10Q9BWT7 1032 aa23.14■■□□□ 1.29
RPUSD3-209ENST00000451405 ANO8Q9HCE9 1232 aaPredicted RBP23.14■■□□□ 1.29
RPUSD3-209ENST00000451405 EDC4Q6P2E9 1401 aaKnown RBP23.14■■□□□ 1.29
RPUSD3-209ENST00000451405 STK32BQ9NY57 414 aa23.12■■□□□ 1.29
RPUSD3-209ENST00000451405 USP54Q70EL1 1684 aa23.12■■□□□ 1.29
RPUSD3-209ENST00000451405 PCGF6Q9BYE7 350 aa23.11■■□□□ 1.29
RPUSD3-209ENST00000451405 PDGFDQ9GZP0 370 aaPredicted RBP23.11■■□□□ 1.29
RPUSD3-209ENST00000451405 SENP3-EIF4A1A0A087X0R7 540 aa23.1■■□□□ 1.29
RPUSD3-209ENST00000451405 LRRC37A3O60309 1634 aa23.1■■□□□ 1.29
RPUSD3-209ENST00000451405 PEAK1Q9H792 1746 aa23.1■■□□□ 1.29
RPUSD3-209ENST00000451405 MARCH10Q8NA82 808 aaPredicted RBP23.09■■□□□ 1.29
RPUSD3-209ENST00000451405 SLC24A1O60721 1099 aa23.08■■□□□ 1.29
RPUSD3-209ENST00000451405 PTF1AQ7RTS3 328 aa23.08■■□□□ 1.29
RPUSD3-209ENST00000451405 CDCA7Q9BWT1 371 aaPredicted RBP23.08■■□□□ 1.29
RPUSD3-209ENST00000451405 USP47Q96K76 1375 aa23.08■■□□□ 1.29
RPUSD3-209ENST00000451405 WNK3Q9BYP7 1800 aa23.08■■□□□ 1.28
RPUSD3-209ENST00000451405 PTGER2P43116 358 aa23.07■■□□□ 1.28
RPUSD3-209ENST00000451405 PROM2Q8N271 834 aa23.07■■□□□ 1.28
RPUSD3-209ENST00000451405 FHDC1Q9C0D6 1143 aaPredicted RBP23.07■■□□□ 1.28
RPUSD3-209ENST00000451405 LTN1O94822 1766 aa23.06■■□□□ 1.28
RPUSD3-209ENST00000451405 SYT17Q9BSW7 474 aa23.06■■□□□ 1.28
RPUSD3-209ENST00000451405 SBF2Q86WG5 1849 aa23.05■■□□□ 1.28
RPUSD3-209ENST00000451405 ABCC6O95255 1503 aa23.05■■□□□ 1.28
RPUSD3-209ENST00000451405 FBLN1P23142 703 aa23.05■■□□□ 1.28
RPUSD3-209ENST00000451405 TMF1P82094 1093 aa23.05■■□□□ 1.28
RPUSD3-209ENST00000451405 ERBB3P21860 1342 aa23.05■■□□□ 1.28
RPUSD3-209ENST00000451405 EXOC5O00471 708 aa23.04■■□□□ 1.28
RPUSD3-209ENST00000451405 SLC15A2Q16348 729 aa23.04■■□□□ 1.28
RPUSD3-209ENST00000451405 TXNRD1Q16881 649 aa23.04■■□□□ 1.28
RPUSD3-209ENST00000451405 ANKRD24Q8TF21 1146 aa23.04■■□□□ 1.28
RPUSD3-209ENST00000451405 NLRP2Q9NX02 1062 aa23.04■■□□□ 1.28
RPUSD3-209ENST00000451405 CCDC7Q96M83 1385 aa23.03■■□□□ 1.28
RPUSD3-209ENST00000451405 C1QTNF8P60827 252 aa23.02■■□□□ 1.28
RPUSD3-209ENST00000451405 MTFR1LQ9H019 292 aa23.02■■□□□ 1.28
RPUSD3-209ENST00000451405 TIMELESSQ9UNS1 1208 aa23.02■■□□□ 1.28
RPUSD3-209ENST00000451405 IP6K1Q92551 441 aa23.01■■□□□ 1.27
RPUSD3-209ENST00000451405 COG3Q96JB2 828 aa23.01■■□□□ 1.27
RPUSD3-209ENST00000451405 ANKRD36BQ8N2N9 1353 aa23.01■■□□□ 1.27
RPUSD3-209ENST00000451405 FYB1O15117 783 aa22.98■■□□□ 1.27
RPUSD3-209ENST00000451405 CLSPNQ9HAW4 1339 aa22.98■■□□□ 1.27
RPUSD3-209ENST00000451405 BCL9O00512 1426 aa22.98■■□□□ 1.27
RPUSD3-209ENST00000451405 CASZ1Q86V15 1759 aa22.97■■□□□ 1.27
RPUSD3-209ENST00000451405 LTV1Q96GA3 475 aaPredicted RBP22.97■■□□□ 1.27
RPUSD3-209ENST00000451405 ARXQ96QS3 562 aa22.97■■□□□ 1.27
RPUSD3-209ENST00000451405 MAP3K19Q56UN5 1328 aa22.97■■□□□ 1.27
RPUSD3-209ENST00000451405 RGPD3A6NKT7 1758 aaPredicted RBP22.96■■□□□ 1.27
RPUSD3-209ENST00000451405 RGPD4Q7Z3J3 1758 aa22.96■■□□□ 1.27
RPUSD3-209ENST00000451405 IL2RBP14784 551 aa22.96■■□□□ 1.27
RPUSD3-209ENST00000451405 GPR162Q16538 588 aa22.96■■□□□ 1.27
RPUSD3-209ENST00000451405 GGNBP2Q9H3C7 697 aa22.96■■□□□ 1.27
RPUSD3-209ENST00000451405 MYOM1P52179 1685 aa22.95■■□□□ 1.26
RPUSD3-209ENST00000451405 TNS2Q63HR2 1409 aa22.94■■□□□ 1.26
RPUSD3-209ENST00000451405 HOXC9P31274 260 aa22.94■■□□□ 1.26
RPUSD3-209ENST00000451405 CDCA8Q53HL2 280 aa22.93■■□□□ 1.26
RPUSD3-209ENST00000451405 UTRNP46939 3433 aa22.92■■□□□ 1.26
RPUSD3-209ENST00000451405 AMPHP49418 695 aa22.92■■□□□ 1.26
RPUSD3-209ENST00000451405 RRS1Q15050 365 aaKnown RBP22.92■■□□□ 1.26
RPUSD3-209ENST00000451405 ACSBG1Q96GR2 724 aa22.92■■□□□ 1.26
RPUSD3-209ENST00000451405 CARD14Q9BXL6 1004 aa22.92■■□□□ 1.26
RPUSD3-209ENST00000451405 SGIP1Q9BQI5 828 aa22.91■■□□□ 1.26
RPUSD3-209ENST00000451405 GIGYF1O75420 1035 aaPredicted RBP22.89■■□□□ 1.25
RPUSD3-209ENST00000451405 KLHL34Q8N239 644 aa22.89■■□□□ 1.25
RPUSD3-209ENST00000451405 IFFO2Q5TF58 517 aa22.88■■□□□ 1.25
RPUSD3-209ENST00000451405 PELP1Q8IZL8 1130 aaKnown RBP22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms