RNA–Protein interactions for RNA: ENST00000450501.5

COPS7B-215, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 4

Gene COPS7B, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-215ENST00000450501 GLI3P10071 1580 aa25.84■■□□□ 1.73
COPS7B-215ENST00000450501 STRN4Q9NRL3 753 aa25.84■■□□□ 1.73
COPS7B-215ENST00000450501 WASHC2AQ641Q2 1341 aa25.84■■□□□ 1.73
COPS7B-215ENST00000450501 ABCC6O95255 1503 aa25.83■■□□□ 1.73
COPS7B-215ENST00000450501 COL5A2P05997 1499 aaPredicted RBP25.81■■□□□ 1.72
COPS7B-215ENST00000450501 RGPD5Q99666 1765 aa25.8■■□□□ 1.72
COPS7B-215ENST00000450501 SPATA31A5Q5VU36 1347 aa25.8■■□□□ 1.72
COPS7B-215ENST00000450501 SPATA31A7Q8IWB4 1347 aa25.8■■□□□ 1.72
COPS7B-215ENST00000450501 RGS12O14924 1447 aa25.8■■□□□ 1.72
COPS7B-215ENST00000450501 AXIN2Q9Y2T1 843 aa25.79■■□□□ 1.72
COPS7B-215ENST00000450501 ANKRD26Q9UPS8 1709 aa25.78■■□□□ 1.72
COPS7B-215ENST00000450501 KNSTRNQ9Y448 316 aa25.78■■□□□ 1.72
COPS7B-215ENST00000450501 LARP1Q6PKG0 1096 aaKnown RBP25.76■■□□□ 1.71
COPS7B-215ENST00000450501 SPATA31A1Q5TZJ5 1347 aa25.76■■□□□ 1.71
COPS7B-215ENST00000450501 NSD2O96028 1365 aa25.76■■□□□ 1.71
COPS7B-215ENST00000450501 MAP3K19Q56UN5 1328 aa25.74■■□□□ 1.71
COPS7B-215ENST00000450501 SOCS7O14512 581 aa25.74■■□□□ 1.71
COPS7B-215ENST00000450501 POTEDQ86YR6 584 aa25.74■■□□□ 1.71
COPS7B-215ENST00000450501 CRB1P82279 1406 aa25.73■■□□□ 1.71
COPS7B-215ENST00000450501 WDR17Q8IZU2 1322 aa25.73■■□□□ 1.71
COPS7B-215ENST00000450501 ONECUT3O60422 494 aaPredicted RBP25.73■■□□□ 1.71
COPS7B-215ENST00000450501 FBLN1P23142 703 aa25.73■■□□□ 1.71
COPS7B-215ENST00000450501 AMPHP49418 695 aa25.72■■□□□ 1.71
COPS7B-215ENST00000450501 FAM98CQ17RN3 349 aaKnown RBP25.72■■□□□ 1.71
COPS7B-215ENST00000450501 IP6K1Q92551 441 aa25.72■■□□□ 1.71
COPS7B-215ENST00000450501 USP35Q9P2H5 1018 aa25.72■■□□□ 1.71
COPS7B-215ENST00000450501 BLMP54132 1417 aaPredicted RBP25.71■■□□□ 1.71
COPS7B-215ENST00000450501 CSB-PGBD3P0DP91 1061 aa25.71■■□□□ 1.71
COPS7B-215ENST00000450501 TOM1L2Q6ZVM7 507 aa25.71■■□□□ 1.71
COPS7B-215ENST00000450501 RTL1A6NKG5 1358 aa25.7■■□□□ 1.71
COPS7B-215ENST00000450501 RRS1Q15050 365 aaKnown RBP25.7■■□□□ 1.7
COPS7B-215ENST00000450501 SEPT12Q8IYM1 358 aa25.7■■□□□ 1.7
COPS7B-215ENST00000450501 A0A0G2JS52 829 aa25.69■■□□□ 1.7
COPS7B-215ENST00000450501 PER1O15534 1290 aaPredicted RBP25.69■■□□□ 1.7
COPS7B-215ENST00000450501 MYT1Q01538 1121 aa25.69■■□□□ 1.7
COPS7B-215ENST00000450501 TCP11L2Q8N4U5 519 aa25.69■■□□□ 1.7
COPS7B-215ENST00000450501 THRAP3Q9Y2W1 955 aaKnown RBP25.69■■□□□ 1.7
COPS7B-215ENST00000450501 ERBB3P21860 1342 aa25.68■■□□□ 1.7
COPS7B-215ENST00000450501 HOXC9P31274 260 aa25.68■■□□□ 1.7
COPS7B-215ENST00000450501 BARGINQ6ZT62 677 aa25.68■■□□□ 1.7
COPS7B-215ENST00000450501 KIF24Q5T7B8 1368 aa25.68■■□□□ 1.7
COPS7B-215ENST00000450501 MAP2P11137 1827 aaKnown RBP25.67■■□□□ 1.7
COPS7B-215ENST00000450501 AMER1Q5JTC6 1135 aaPredicted RBP25.67■■□□□ 1.7
COPS7B-215ENST00000450501 ANKRD24Q8TF21 1146 aa25.67■■□□□ 1.7
COPS7B-215ENST00000450501 BRWD3Q6RI45 1802 aa25.67■■□□□ 1.7
COPS7B-215ENST00000450501 THSD7AQ9UPZ6 1657 aa25.66■■□□□ 1.7
COPS7B-215ENST00000450501 MORC1Q86VD1 984 aa25.65■■□□□ 1.7
COPS7B-215ENST00000450501 CARD10Q9BWT7 1032 aa25.65■■□□□ 1.7
COPS7B-215ENST00000450501 TNNT2P45379 298 aaPredicted RBP25.64■■□□□ 1.7
COPS7B-215ENST00000450501 FLT4P35916 1363 aa25.64■■□□□ 1.69
COPS7B-215ENST00000450501 FAM208AQ9UK61 1670 aaKnown RBP25.64■■□□□ 1.69
COPS7B-215ENST00000450501 PEAK1Q9H792 1746 aa25.63■■□□□ 1.69
COPS7B-215ENST00000450501 NLRP2Q9NX02 1062 aa25.62■■□□□ 1.69
COPS7B-215ENST00000450501 EMILIN1Q9Y6C2 1016 aa25.62■■□□□ 1.69
COPS7B-215ENST00000450501 LTV1Q96GA3 475 aaPredicted RBP25.61■■□□□ 1.69
COPS7B-215ENST00000450501 INSRP06213 1382 aa25.6■■□□□ 1.69
COPS7B-215ENST00000450501 NPC1L1Q9UHC9 1359 aa25.6■■□□□ 1.69
COPS7B-215ENST00000450501 PPM1GO15355 546 aaPredicted RBP25.6■■□□□ 1.69
COPS7B-215ENST00000450501 KRT27Q7Z3Y8 459 aa25.6■■□□□ 1.69
COPS7B-215ENST00000450501 POLKQ9UBT6 870 aa25.6■■□□□ 1.69
COPS7B-215ENST00000450501 SMG6Q86US8 1419 aaKnown RBP25.6■■□□□ 1.69
COPS7B-215ENST00000450501 WNK3Q9BYP7 1800 aa25.6■■□□□ 1.69
COPS7B-215ENST00000450501 HSP90AB2PQ58FF8 381 aa25.58■■□□□ 1.69
COPS7B-215ENST00000450501 CC2D1BQ5T0F9 858 aaKnown RBP25.58■■□□□ 1.69
COPS7B-215ENST00000450501 CDCA7Q9BWT1 371 aaPredicted RBP25.58■■□□□ 1.69
COPS7B-215ENST00000450501 PARP4Q9UKK3 1724 aaKnown RBP25.57■■□□□ 1.68
COPS7B-215ENST00000450501 RGPD2P0DJD1 1756 aa25.54■■□□□ 1.68
COPS7B-215ENST00000450501 PDE3BQ13370 1112 aa25.53■■□□□ 1.68
COPS7B-215ENST00000450501 DISP2A7MBM2 1401 aa25.52■■□□□ 1.68
COPS7B-215ENST00000450501 DDB1Q16531 1140 aa25.51■■□□□ 1.67
COPS7B-215ENST00000450501 UPF1Q92900 1129 aaKnown RBP eCLIP25.51■■□□□ 1.67
COPS7B-215ENST00000450501 LRRC37A3O60309 1634 aa25.51■■□□□ 1.67
COPS7B-215ENST00000450501 IL2RBP14784 551 aa25.5■■□□□ 1.67
COPS7B-215ENST00000450501 CNGB1Q14028 1251 aaPredicted RBP25.5■■□□□ 1.67
COPS7B-215ENST00000450501 EP400Q96L91 3159 aa25.5■■□□□ 1.67
COPS7B-215ENST00000450501 NBPF6Q5VWK0 638 aa25.49■■□□□ 1.67
COPS7B-215ENST00000450501 NBPF4Q96M43 638 aa25.49■■□□□ 1.67
COPS7B-215ENST00000450501 EXOC5O00471 708 aa25.46■■□□□ 1.67
COPS7B-215ENST00000450501 DDX10Q13206 875 aaKnown RBP25.46■■□□□ 1.67
COPS7B-215ENST00000450501 FAM182BQ5T319 152 aa25.45■■□□□ 1.66
COPS7B-215ENST00000450501 FAM196AQ6ZSG2 479 aa25.44■■□□□ 1.66
COPS7B-215ENST00000450501 CCDC125Q86Z20 511 aa25.44■■□□□ 1.66
COPS7B-215ENST00000450501 MTHFSP49914 203 aa25.43■■□□□ 1.66
COPS7B-215ENST00000450501 EIF4A2Q14240 407 aaKnown RBP25.43■■□□□ 1.66
COPS7B-215ENST00000450501 USHBP1Q8N6Y0 703 aa25.43■■□□□ 1.66
COPS7B-215ENST00000450501 TNS2Q63HR2 1409 aa25.43■■□□□ 1.66
COPS7B-215ENST00000450501 RAPGEF4Q8WZA2 1011 aa25.41■■□□□ 1.66
COPS7B-215ENST00000450501 OVOS2A0A0G2JMS6 1433 aa25.4■■□□□ 1.66
COPS7B-215ENST00000450501 EYA1Q99502 592 aa25.4■■□□□ 1.66
COPS7B-215ENST00000450501 NCAPD2Q15021 1401 aa25.39■■□□□ 1.66
COPS7B-215ENST00000450501 MEGF6O75095 1541 aa25.38■■□□□ 1.65
COPS7B-215ENST00000450501 ZNF316A6NFI3 1004 aaPredicted RBP25.38■■□□□ 1.65
COPS7B-215ENST00000450501 MARCH10Q8NA82 808 aaPredicted RBP25.38■■□□□ 1.65
COPS7B-215ENST00000450501 TATP17735 454 aaPredicted RBP25.37■■□□□ 1.65
COPS7B-215ENST00000450501 SF3B2Q13435 895 aaKnown RBP25.37■■□□□ 1.65
COPS7B-215ENST00000450501 RGPD1P0DJD0 1748 aa25.37■■□□□ 1.65
COPS7B-215ENST00000450501 IGSF1Q8N6C5 1336 aa25.35■■□□□ 1.65
COPS7B-215ENST00000450501 IL13P35225 146 aa25.34■■□□□ 1.65
COPS7B-215ENST00000450501 ZCRB1Q8TBF4 217 aaKnown RBP25.34■■□□□ 1.65
COPS7B-215ENST00000450501 BCL9O00512 1426 aa25.34■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms