RNA–Protein interactions for RNA: ENST00000448340.5

HLCS-205, Transcript of holocarboxylase synthetase, humanhuman

TSL 1 (best)

Gene HLCS, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-205ENST00000448340 FYB1O15117 783 aa24.25■■□□□ 1.47
HLCS-205ENST00000448340 CAMKK2Q96RR4 588 aa24.25■■□□□ 1.47
HLCS-205ENST00000448340 CGNL1Q0VF96 1302 aa24.25■■□□□ 1.47
HLCS-205ENST00000448340 USP54Q70EL1 1684 aa24.24■■□□□ 1.47
HLCS-205ENST00000448340 ZNF316A6NFI3 1004 aaPredicted RBP24.24■■□□□ 1.47
HLCS-205ENST00000448340 EZH2Q15910 746 aaKnown RBP24.24■■□□□ 1.47
HLCS-205ENST00000448340 RGPD1P0DJD0 1748 aa24.24■■□□□ 1.47
HLCS-205ENST00000448340 KIAA0232Q92628 1395 aa24.23■■□□□ 1.47
HLCS-205ENST00000448340 PHRF1Q9P1Y6 1649 aaKnown RBP24.23■■□□□ 1.47
HLCS-205ENST00000448340 KIF20BQ96Q89 1820 aa24.22■■□□□ 1.47
HLCS-205ENST00000448340 KNSTRNQ9Y448 316 aa24.22■■□□□ 1.47
HLCS-205ENST00000448340 SLIT3O75094 1523 aa24.21■■□□□ 1.47
HLCS-205ENST00000448340 OVOS2A0A0J9YW53 1432 aa24.21■■□□□ 1.47
HLCS-205ENST00000448340 OVOS2Q6IE36 1432 aa24.21■■□□□ 1.47
HLCS-205ENST00000448340 PER1O15534 1290 aaPredicted RBP24.21■■□□□ 1.47
HLCS-205ENST00000448340 CHRNA2Q15822 529 aa24.21■■□□□ 1.47
HLCS-205ENST00000448340 COG3Q96JB2 828 aa24.21■■□□□ 1.47
HLCS-205ENST00000448340 GCP02774 474 aa24.2■■□□□ 1.46
HLCS-205ENST00000448340 FAM196AQ6ZSG2 479 aa24.2■■□□□ 1.46
HLCS-205ENST00000448340 KCNH5Q8NCM2 988 aa24.2■■□□□ 1.46
HLCS-205ENST00000448340 TNS1Q9HBL0 1735 aaKnown RBP24.2■■□□□ 1.46
HLCS-205ENST00000448340 TRIM37O94972 964 aa24.19■■□□□ 1.46
HLCS-205ENST00000448340 GGNBP2Q9H3C7 697 aa24.19■■□□□ 1.46
HLCS-205ENST00000448340 ZC3H6P61129 1189 aaKnown RBP24.17■■□□□ 1.46
HLCS-205ENST00000448340 NSD2O96028 1365 aa24.16■■□□□ 1.46
HLCS-205ENST00000448340 BARGINQ6ZT62 677 aa24.16■■□□□ 1.46
HLCS-205ENST00000448340 AMER1Q5JTC6 1135 aaPredicted RBP24.15■■□□□ 1.46
HLCS-205ENST00000448340 STRN4Q9NRL3 753 aa24.15■■□□□ 1.46
HLCS-205ENST00000448340 CPDO75976 1380 aa24.15■■□□□ 1.46
HLCS-205ENST00000448340 APBA3O96018 575 aa24.14■■□□□ 1.45
HLCS-205ENST00000448340 DDX10Q13206 875 aaKnown RBP24.14■■□□□ 1.45
HLCS-205ENST00000448340 PARD3Q8TEW0 1356 aa24.14■■□□□ 1.45
HLCS-205ENST00000448340 NFAT5O94916 1531 aa24.13■■□□□ 1.45
HLCS-205ENST00000448340 ANKRD26Q9UPS8 1709 aa24.13■■□□□ 1.45
HLCS-205ENST00000448340 SOX12O15370 315 aa24.12■■□□□ 1.45
HLCS-205ENST00000448340 NPC1L1Q9UHC9 1359 aa24.12■■□□□ 1.45
HLCS-205ENST00000448340 LARP1Q6PKG0 1096 aaKnown RBP24.1■■□□□ 1.45
HLCS-205ENST00000448340 ARHGEF25Q86VW2 580 aa24.1■■□□□ 1.45
HLCS-205ENST00000448340 USP35Q9P2H5 1018 aa24.1■■□□□ 1.45
HLCS-205ENST00000448340 CAMTA1Q9Y6Y1 1673 aa24.09■■□□□ 1.45
HLCS-205ENST00000448340 EVA1CP58658 441 aa24.08■■□□□ 1.45
HLCS-205ENST00000448340 PDE3BQ13370 1112 aa24.07■■□□□ 1.44
HLCS-205ENST00000448340 MORC1Q86VD1 984 aa24.07■■□□□ 1.44
HLCS-205ENST00000448340 TCP11L2Q8N4U5 519 aa24.07■■□□□ 1.44
HLCS-205ENST00000448340 AATKQ6ZMQ8 1374 aa24.05■■□□□ 1.44
HLCS-205ENST00000448340 CC2D1BQ5T0F9 858 aaKnown RBP24.05■■□□□ 1.44
HLCS-205ENST00000448340 LTN1O94822 1766 aa24.04■■□□□ 1.44
HLCS-205ENST00000448340 ZBTB7CA1YPR0 619 aa24.04■■□□□ 1.44
HLCS-205ENST00000448340 FBLN1P23142 703 aa24.04■■□□□ 1.44
HLCS-205ENST00000448340 LMO7Q8WWI1 1683 aa24.04■■□□□ 1.44
HLCS-205ENST00000448340 THRAP3Q9Y2W1 955 aaKnown RBP24.03■■□□□ 1.44
HLCS-205ENST00000448340 RREB1Q92766 1687 aa24.02■■□□□ 1.44
HLCS-205ENST00000448340 COL18A1P39060 1754 aa24.02■■□□□ 1.44
HLCS-205ENST00000448340 ABCC6O95255 1503 aa24.02■■□□□ 1.44
HLCS-205ENST00000448340 MAP3K19Q56UN5 1328 aa24.02■■□□□ 1.44
HLCS-205ENST00000448340 TNNT2P45379 298 aaPredicted RBP24■■□□□ 1.43
HLCS-205ENST00000448340 RRS1Q15050 365 aaKnown RBP24■■□□□ 1.43
HLCS-205ENST00000448340 NBPF14Q5TI25 921 aa24■■□□□ 1.43
HLCS-205ENST00000448340 MAP2P11137 1827 aaKnown RBP23.99■■□□□ 1.43
HLCS-205ENST00000448340 KIF24Q5T7B8 1368 aa23.99■■□□□ 1.43
HLCS-205ENST00000448340 NUP188Q5SRE5 1749 aa23.98■■□□□ 1.43
HLCS-205ENST00000448340 IP6K1Q92551 441 aa23.98■■□□□ 1.43
HLCS-205ENST00000448340 AXIN2Q9Y2T1 843 aa23.98■■□□□ 1.43
HLCS-205ENST00000448340 COL5A2P05997 1499 aaPredicted RBP23.98■■□□□ 1.43
HLCS-205ENST00000448340 RTL1A6NKG5 1358 aa23.97■■□□□ 1.43
HLCS-205ENST00000448340 AMPHP49418 695 aa23.97■■□□□ 1.43
HLCS-205ENST00000448340 CNGB1Q14028 1251 aaPredicted RBP23.97■■□□□ 1.43
HLCS-205ENST00000448340 POLKQ9UBT6 870 aa23.96■■□□□ 1.43
HLCS-205ENST00000448340 HOXC9P31274 260 aa23.95■■□□□ 1.42
HLCS-205ENST00000448340 EMILIN1Q9Y6C2 1016 aa23.95■■□□□ 1.42
HLCS-205ENST00000448340 RGPD5Q99666 1765 aa23.95■■□□□ 1.42
HLCS-205ENST00000448340 SPON1Q9HCB6 807 aa23.94■■□□□ 1.42
HLCS-205ENST00000448340 FLT4P35916 1363 aa23.93■■□□□ 1.42
HLCS-205ENST00000448340 KCNQ2O43526 872 aa23.93■■□□□ 1.42
HLCS-205ENST00000448340 PEAK1Q9H792 1746 aa23.93■■□□□ 1.42
HLCS-205ENST00000448340 CRB1P82279 1406 aa23.93■■□□□ 1.42
HLCS-205ENST00000448340 PLSCR1O15162 318 aa23.92■■□□□ 1.42
HLCS-205ENST00000448340 YY1P25490 414 aa23.92■■□□□ 1.42
HLCS-205ENST00000448340 PARP4Q9UKK3 1724 aaKnown RBP23.92■■□□□ 1.42
HLCS-205ENST00000448340 SMG6Q86US8 1419 aaKnown RBP23.92■■□□□ 1.42
HLCS-205ENST00000448340 PPM1GO15355 546 aaPredicted RBP23.91■■□□□ 1.42
HLCS-205ENST00000448340 PTF1AQ7RTS3 328 aa23.9■■□□□ 1.42
HLCS-205ENST00000448340 INSRP06213 1382 aa23.9■■□□□ 1.42
HLCS-205ENST00000448340 ERBB3P21860 1342 aa23.89■■□□□ 1.42
HLCS-205ENST00000448340 WDR17Q8IZU2 1322 aa23.89■■□□□ 1.42
HLCS-205ENST00000448340 RALBP1Q15311 655 aa23.89■■□□□ 1.41
HLCS-205ENST00000448340 HSP90AB2PQ58FF8 381 aa23.89■■□□□ 1.41
HLCS-205ENST00000448340 ANKRD24Q8TF21 1146 aa23.89■■□□□ 1.41
HLCS-205ENST00000448340 OVOS2A0A0G2JMS6 1433 aa23.89■■□□□ 1.41
HLCS-205ENST00000448340 ANO8Q9HCE9 1232 aaPredicted RBP23.88■■□□□ 1.41
HLCS-205ENST00000448340 CSB-PGBD3P0DP91 1061 aa23.87■■□□□ 1.41
HLCS-205ENST00000448340 MTHFSP49914 203 aa23.87■■□□□ 1.41
HLCS-205ENST00000448340 PROM2Q8N271 834 aa23.87■■□□□ 1.41
HLCS-205ENST00000448340 BCL11BQ9C0K0 894 aaPredicted RBP23.86■■□□□ 1.41
HLCS-205ENST00000448340 PPP2R1AP30153 589 aa23.85■■□□□ 1.41
HLCS-205ENST00000448340 DDB1Q16531 1140 aa23.85■■□□□ 1.41
HLCS-205ENST00000448340 TOM1L2Q6ZVM7 507 aa23.85■■□□□ 1.41
HLCS-205ENST00000448340 LTV1Q96GA3 475 aaPredicted RBP23.85■■□□□ 1.41
HLCS-205ENST00000448340 PPP1R1BQ9UD71 204 aaPredicted RBP23.85■■□□□ 1.41
HLCS-205ENST00000448340 BCL9O00512 1426 aa23.84■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms