RNA–Protein interactions for RNA: ENST00000447419.6

PTX4-203, Transcript of pentraxin 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTX4, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX4-203ENST00000447419 LMO7Q8WWI1 1683 aa28.34■■■□□ 2.13
PTX4-203ENST00000447419 SPATA31A5Q5VU36 1347 aa28.34■■■□□ 2.13
PTX4-203ENST00000447419 SPATA31A7Q8IWB4 1347 aa28.34■■■□□ 2.13
PTX4-203ENST00000447419 COL5A2P05997 1499 aaPredicted RBP28.32■■■□□ 2.12
PTX4-203ENST00000447419 SEPT12Q8IYM1 358 aa28.31■■■□□ 2.12
PTX4-203ENST00000447419 SPATA31A1Q5TZJ5 1347 aa28.29■■■□□ 2.12
PTX4-203ENST00000447419 USP54Q70EL1 1684 aa28.29■■■□□ 2.12
PTX4-203ENST00000447419 RRS1Q15050 365 aaKnown RBP28.28■■■□□ 2.12
PTX4-203ENST00000447419 WASHC2AQ641Q2 1341 aa28.28■■■□□ 2.12
PTX4-203ENST00000447419 CSB-PGBD3P0DP91 1061 aa28.28■■■□□ 2.12
PTX4-203ENST00000447419 COL18A1P39060 1754 aa28.26■■■□□ 2.11
PTX4-203ENST00000447419 TOM1L2Q6ZVM7 507 aa28.26■■■□□ 2.11
PTX4-203ENST00000447419 CGNL1Q0VF96 1302 aa28.25■■■□□ 2.11
PTX4-203ENST00000447419 MAP3K19Q56UN5 1328 aa28.25■■■□□ 2.11
PTX4-203ENST00000447419 CCDC7Q96M83 1385 aa28.25■■■□□ 2.11
PTX4-203ENST00000447419 TNNT2P45379 298 aaPredicted RBP28.23■■■□□ 2.11
PTX4-203ENST00000447419 LTV1Q96GA3 475 aaPredicted RBP28.23■■■□□ 2.11
PTX4-203ENST00000447419 KIF20BQ96Q89 1820 aa28.23■■■□□ 2.11
PTX4-203ENST00000447419 ONECUT3O60422 494 aaPredicted RBP28.22■■■□□ 2.11
PTX4-203ENST00000447419 AMPHP49418 695 aa28.22■■■□□ 2.11
PTX4-203ENST00000447419 CRB1P82279 1406 aa28.21■■■□□ 2.11
PTX4-203ENST00000447419 CNGB1Q14028 1251 aaPredicted RBP28.21■■■□□ 2.11
PTX4-203ENST00000447419 FAM182BQ5T319 152 aa28.21■■■□□ 2.11
PTX4-203ENST00000447419 TCP11L2Q8N4U5 519 aa28.21■■■□□ 2.11
PTX4-203ENST00000447419 LTN1O94822 1766 aa28.21■■■□□ 2.11
PTX4-203ENST00000447419 WDR17Q8IZU2 1322 aa28.21■■■□□ 2.11
PTX4-203ENST00000447419 RGPD5Q99666 1765 aa28.2■■■□□ 2.11
PTX4-203ENST00000447419 ANKRD24Q8TF21 1146 aa28.19■■■□□ 2.1
PTX4-203ENST00000447419 HOXC9P31274 260 aa28.18■■■□□ 2.1
PTX4-203ENST00000447419 IP6K1Q92551 441 aa28.18■■■□□ 2.1
PTX4-203ENST00000447419 KNSTRNQ9Y448 316 aa28.18■■■□□ 2.1
PTX4-203ENST00000447419 PPM1GO15355 546 aaPredicted RBP28.17■■■□□ 2.1
PTX4-203ENST00000447419 UPF1Q92900 1129 aaKnown RBP eCLIP28.17■■■□□ 2.1
PTX4-203ENST00000447419 NLRP2Q9NX02 1062 aa28.17■■■□□ 2.1
PTX4-203ENST00000447419 EMILIN1Q9Y6C2 1016 aa28.17■■■□□ 2.1
PTX4-203ENST00000447419 ERBB3P21860 1342 aa28.17■■■□□ 2.1
PTX4-203ENST00000447419 KRT27Q7Z3Y8 459 aa28.16■■■□□ 2.1
PTX4-203ENST00000447419 EP400Q96L91 3159 aa28.14■■■□□ 2.1
PTX4-203ENST00000447419 BRWD3Q6RI45 1802 aa28.14■■■□□ 2.09
PTX4-203ENST00000447419 BARGINQ6ZT62 677 aa28.13■■■□□ 2.09
PTX4-203ENST00000447419 THSD7AQ9UPZ6 1657 aa28.11■■■□□ 2.09
PTX4-203ENST00000447419 HSP90AB2PQ58FF8 381 aa28.11■■■□□ 2.09
PTX4-203ENST00000447419 CARD10Q9BWT7 1032 aa28.11■■■□□ 2.09
PTX4-203ENST00000447419 ABCC6O95255 1503 aa28.11■■■□□ 2.09
PTX4-203ENST00000447419 THRAP3Q9Y2W1 955 aaKnown RBP28.1■■■□□ 2.09
PTX4-203ENST00000447419 BLMP54132 1417 aaPredicted RBP28.1■■■□□ 2.09
PTX4-203ENST00000447419 MORC1Q86VD1 984 aa28.09■■■□□ 2.09
PTX4-203ENST00000447419 AMER1Q5JTC6 1135 aaPredicted RBP28.08■■■□□ 2.09
PTX4-203ENST00000447419 CC2D1BQ5T0F9 858 aaKnown RBP28.08■■■□□ 2.09
PTX4-203ENST00000447419 PER1O15534 1290 aaPredicted RBP28.08■■■□□ 2.08
PTX4-203ENST00000447419 PEAK1Q9H792 1746 aa28.07■■■□□ 2.08
PTX4-203ENST00000447419 POLKQ9UBT6 870 aa28.06■■■□□ 2.08
PTX4-203ENST00000447419 PDE3BQ13370 1112 aa28.05■■■□□ 2.08
PTX4-203ENST00000447419 USHBP1Q8N6Y0 703 aa28.05■■■□□ 2.08
PTX4-203ENST00000447419 RTL1A6NKG5 1358 aa28.05■■■□□ 2.08
PTX4-203ENST00000447419 FLT4P35916 1363 aa28.04■■■□□ 2.08
PTX4-203ENST00000447419 NSD2O96028 1365 aa28.03■■■□□ 2.08
PTX4-203ENST00000447419 ZEB1P37275 1124 aaPredicted RBP28.03■■■□□ 2.08
PTX4-203ENST00000447419 DDB1Q16531 1140 aa28.02■■■□□ 2.08
PTX4-203ENST00000447419 NBPF6Q5VWK0 638 aa28.01■■■□□ 2.07
PTX4-203ENST00000447419 NBPF4Q96M43 638 aa28.01■■■□□ 2.07
PTX4-203ENST00000447419 ANKRD26Q9UPS8 1709 aa28■■■□□ 2.07
PTX4-203ENST00000447419 INSRP06213 1382 aa27.99■■■□□ 2.07
PTX4-203ENST00000447419 DISP2A7MBM2 1401 aa27.98■■■□□ 2.07
PTX4-203ENST00000447419 SMG6Q86US8 1419 aaKnown RBP27.97■■■□□ 2.07
PTX4-203ENST00000447419 IL2RBP14784 551 aa27.97■■■□□ 2.07
PTX4-203ENST00000447419 LRRC37A3O60309 1634 aa27.96■■■□□ 2.07
PTX4-203ENST00000447419 PARP4Q9UKK3 1724 aaKnown RBP27.94■■■□□ 2.06
PTX4-203ENST00000447419 CDCA7Q9BWT1 371 aaPredicted RBP27.94■■■□□ 2.06
PTX4-203ENST00000447419 KIF24Q5T7B8 1368 aa27.94■■■□□ 2.06
PTX4-203ENST00000447419 RGPD2P0DJD1 1756 aa27.94■■■□□ 2.06
PTX4-203ENST00000447419 EXOC5O00471 708 aa27.93■■■□□ 2.06
PTX4-203ENST00000447419 MARCH10Q8NA82 808 aaPredicted RBP27.93■■■□□ 2.06
PTX4-203ENST00000447419 MAP2P11137 1827 aaKnown RBP27.93■■■□□ 2.06
PTX4-203ENST00000447419 TRIM37O94972 964 aa27.92■■■□□ 2.06
PTX4-203ENST00000447419 DEFB132Q7Z7B7 95 aa27.92■■■□□ 2.06
PTX4-203ENST00000447419 WNK3Q9BYP7 1800 aa27.92■■■□□ 2.06
PTX4-203ENST00000447419 EIF4A2Q14240 407 aaKnown RBP27.91■■■□□ 2.06
PTX4-203ENST00000447419 FAM196AQ6ZSG2 479 aa27.91■■■□□ 2.06
PTX4-203ENST00000447419 SF3B2Q13435 895 aaKnown RBP27.89■■■□□ 2.06
PTX4-203ENST00000447419 MEGF6O75095 1541 aa27.88■■■□□ 2.05
PTX4-203ENST00000447419 DDX10Q13206 875 aaKnown RBP27.88■■■□□ 2.05
PTX4-203ENST00000447419 FAM208AQ9UK61 1670 aaKnown RBP27.88■■■□□ 2.05
PTX4-203ENST00000447419 MTHFSP49914 203 aa27.87■■■□□ 2.05
PTX4-203ENST00000447419 DDX54Q8TDD1 881 aaKnown RBP27.87■■■□□ 2.05
PTX4-203ENST00000447419 EYA1Q99502 592 aa27.87■■■□□ 2.05
PTX4-203ENST00000447419 TNS2Q63HR2 1409 aa27.87■■■□□ 2.05
PTX4-203ENST00000447419 OVOS2A0A0G2JMS6 1433 aa27.86■■■□□ 2.05
PTX4-203ENST00000447419 PTF1AQ7RTS3 328 aa27.85■■■□□ 2.05
PTX4-203ENST00000447419 CCDC125Q86Z20 511 aa27.85■■■□□ 2.05
PTX4-203ENST00000447419 RAPGEF4Q8WZA2 1011 aa27.85■■■□□ 2.05
PTX4-203ENST00000447419 NPC1L1Q9UHC9 1359 aa27.83■■■□□ 2.05
PTX4-203ENST00000447419 ACSBG1Q96GR2 724 aa27.82■■■□□ 2.04
PTX4-203ENST00000447419 TATP17735 454 aaPredicted RBP27.81■■■□□ 2.04
PTX4-203ENST00000447419 EN1Q05925 392 aaPredicted RBP27.81■■■□□ 2.04
PTX4-203ENST00000447419 APBA3O96018 575 aa27.8■■■□□ 2.04
PTX4-203ENST00000447419 ZCRB1Q8TBF4 217 aaKnown RBP27.8■■■□□ 2.04
PTX4-203ENST00000447419 KCNQ2O43526 872 aa27.77■■■□□ 2.04
PTX4-203ENST00000447419 BAG6P46379 1132 aa27.77■■■□□ 2.04
PTX4-203ENST00000447419 AEBP1Q8IUX7 1158 aa27.77■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms