RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 TRMT44Q8IYL2 757 aaKnown RBP8.04□□□□□ -1.12
HMGB1P16-201ENST00000447155 TRAIPQ9BWF2 469 aa8.04□□□□□ -1.12
HMGB1P16-201ENST00000447155 VRTNQ9H8Y1 702 aa8.04□□□□□ -1.12
HMGB1P16-201ENST00000447155 CHIC2Q9UKJ5 165 aa8.04□□□□□ -1.12
HMGB1P16-201ENST00000447155 LZTS3O60299 673 aaPredicted RBP8.03□□□□□ -1.12
HMGB1P16-201ENST00000447155 ATG7O95352 703 aa8.03□□□□□ -1.12
HMGB1P16-201ENST00000447155 MAP7D1Q3KQU3 841 aa8.03□□□□□ -1.12
HMGB1P16-201ENST00000447155 PLPP7Q8NBV4 271 aa8.03□□□□□ -1.12
HMGB1P16-201ENST00000447155 CD2BP2O95400 341 aaKnown RBP8.02□□□□□ -1.13
HMGB1P16-201ENST00000447155 VARSP26640 1264 aaKnown RBP8.02□□□□□ -1.13
HMGB1P16-201ENST00000447155 NBPF20Q3BBV1 942 aa8.02□□□□□ -1.13
HMGB1P16-201ENST00000447155 CSB-PGBD3P0DP91 1061 aa8.01□□□□□ -1.13
HMGB1P16-201ENST00000447155 SKOR1P84550 965 aa8.01□□□□□ -1.13
HMGB1P16-201ENST00000447155 CDCA8Q53HL2 280 aa8.01□□□□□ -1.13
HMGB1P16-201ENST00000447155 KANK4Q5T7N3 995 aaPredicted RBP8.01□□□□□ -1.13
HMGB1P16-201ENST00000447155 RNF20Q5VTR2 975 aa8.01□□□□□ -1.13
HMGB1P16-201ENST00000447155 CCDC125Q86Z20 511 aa8.01□□□□□ -1.13
HMGB1P16-201ENST00000447155 ESPNB1AK53 854 aa8□□□□□ -1.13
HMGB1P16-201ENST00000447155 GIGYF1O75420 1035 aaPredicted RBP8□□□□□ -1.13
HMGB1P16-201ENST00000447155 SEPT12Q8IYM1 358 aa8□□□□□ -1.13
HMGB1P16-201ENST00000447155 USTQ9Y2C2 406 aa8□□□□□ -1.13
HMGB1P16-201ENST00000447155 NCOA4Q13772 614 aa7.99□□□□□ -1.13
HMGB1P16-201ENST00000447155 EML3Q32P44 896 aa7.99□□□□□ -1.13
HMGB1P16-201ENST00000447155 TRAF7Q6Q0C0 670 aa7.99□□□□□ -1.13
HMGB1P16-201ENST00000447155 DEPDC4Q8N2C3 294 aa7.99□□□□□ -1.13
HMGB1P16-201ENST00000447155 MKRN1Q9UHC7 482 aaKnown RBP7.99□□□□□ -1.13
HMGB1P16-201ENST00000447155 DOLKQ9UPQ8 538 aa7.99□□□□□ -1.13
HMGB1P16-201ENST00000447155 MAP4K5Q9Y4K4 846 aa7.99□□□□□ -1.13
HMGB1P16-201ENST00000447155 ATP5J2-PTCD1G3V325 749 aa7.98□□□□□ -1.13
HMGB1P16-201ENST00000447155 ELOAQ14241 798 aaKnown RBP7.98□□□□□ -1.13
HMGB1P16-201ENST00000447155 LIAT1Q6ZQX7 453 aa7.98□□□□□ -1.13
HMGB1P16-201ENST00000447155 CCDC85AQ96PX6 553 aaPredicted RBP7.98□□□□□ -1.13
HMGB1P16-201ENST00000447155 FAM196BA6NMK8 535 aa7.97□□□□□ -1.13
HMGB1P16-201ENST00000447155 TSGA10IPQ3SY00 556 aa7.97□□□□□ -1.13
HMGB1P16-201ENST00000447155 RC3H1Q5TC82 1133 aaKnown RBP7.97□□□□□ -1.13
HMGB1P16-201ENST00000447155 EHBP1Q8NDI1 1231 aa7.97□□□□□ -1.13
HMGB1P16-201ENST00000447155 KCTD15Q96SI1 283 aaPredicted RBP7.97□□□□□ -1.13
HMGB1P16-201ENST00000447155 LARP1Q6PKG0 1096 aaKnown RBP7.96□□□□□ -1.14
HMGB1P16-201ENST00000447155 VASH1Q7L8A9 365 aaPredicted RBP7.96□□□□□ -1.14
HMGB1P16-201ENST00000447155 TRIM50Q86XT4 487 aa7.96□□□□□ -1.14
HMGB1P16-201ENST00000447155 EMID1Q96A84 441 aaPredicted RBP7.96□□□□□ -1.14
HMGB1P16-201ENST00000447155 NOD1Q9Y239 953 aa7.96□□□□□ -1.14
HMGB1P16-201ENST00000447155 RASA1P20936 1047 aa7.95□□□□□ -1.14
HMGB1P16-201ENST00000447155 SLC19A1P41440 591 aa7.95□□□□□ -1.14
HMGB1P16-201ENST00000447155 OXLD1Q5BKU9 147 aa7.95□□□□□ -1.14
HMGB1P16-201ENST00000447155 KCTD17Q8N5Z5 321 aa7.95□□□□□ -1.14
HMGB1P16-201ENST00000447155 SIRT1Q96EB6 747 aa7.95□□□□□ -1.14
HMGB1P16-201ENST00000447155 CDK15Q96Q40 435 aa7.95□□□□□ -1.14
HMGB1P16-201ENST00000447155 PCDHB11Q9Y5F2 797 aa7.95□□□□□ -1.14
HMGB1P16-201ENST00000447155 USP17L15C9J2P7 530 aa7.94□□□□□ -1.14
HMGB1P16-201ENST00000447155 USP17L10C9JJH3 530 aa7.94□□□□□ -1.14
HMGB1P16-201ENST00000447155 USP17L13C9JLJ4 530 aa7.94□□□□□ -1.14
HMGB1P16-201ENST00000447155 USP17L12C9JPN9 530 aa7.94□□□□□ -1.14
HMGB1P16-201ENST00000447155 USP17L11C9JVI0 530 aa7.94□□□□□ -1.14
HMGB1P16-201ENST00000447155 USP17L21D6R901 530 aa7.94□□□□□ -1.14
HMGB1P16-201ENST00000447155 USP17L18D6R9N7 530 aa7.94□□□□□ -1.14
HMGB1P16-201ENST00000447155 USP17L22D6RA61 530 aa7.94□□□□□ -1.14
HMGB1P16-201ENST00000447155 USP17L17D6RBQ6 530 aa7.94□□□□□ -1.14
HMGB1P16-201ENST00000447155 USP17L19D6RCP7 530 aa7.94□□□□□ -1.14
HMGB1P16-201ENST00000447155 USP17L20D6RJB6 530 aa7.94□□□□□ -1.14
HMGB1P16-201ENST00000447155 USP17L24Q0WX57 530 aa7.94□□□□□ -1.14
HMGB1P16-201ENST00000447155 TRIM26Q12899 539 aaPredicted RBP7.94□□□□□ -1.14
HMGB1P16-201ENST00000447155 MPNDQ8N594 471 aa7.94□□□□□ -1.14
HMGB1P16-201ENST00000447155 NOVA2Q9UNW9 492 aaKnown RBP7.94□□□□□ -1.14
HMGB1P16-201ENST00000447155 ZBTB7CA1YPR0 619 aa7.93□□□□□ -1.14
HMGB1P16-201ENST00000447155 WNT7AO00755 349 aa7.93□□□□□ -1.14
HMGB1P16-201ENST00000447155 ATP1A2P50993 1020 aa7.93□□□□□ -1.14
HMGB1P16-201ENST00000447155 PTK7Q13308 1070 aa7.93□□□□□ -1.14
HMGB1P16-201ENST00000447155 CRTC2Q53ET0 693 aaPredicted RBP7.93□□□□□ -1.14
HMGB1P16-201ENST00000447155 INTS6LQ5JSJ4 861 aaKnown RBP7.93□□□□□ -1.14
HMGB1P16-201ENST00000447155 OGFOD1Q8N543 542 aa7.93□□□□□ -1.14
HMGB1P16-201ENST00000447155 ZMIZ1Q9ULJ6 1067 aa7.93□□□□□ -1.14
HMGB1P16-201ENST00000447155 A0A0G2JS52 829 aa7.92□□□□□ -1.14
HMGB1P16-201ENST00000447155 RAB15P59190 212 aa7.92□□□□□ -1.14
HMGB1P16-201ENST00000447155 USP4Q13107 963 aa7.92□□□□□ -1.14
HMGB1P16-201ENST00000447155 ARID5BQ14865 1188 aa7.92□□□□□ -1.14
HMGB1P16-201ENST00000447155 CDCA7Q9BWT1 371 aaPredicted RBP7.92□□□□□ -1.14
HMGB1P16-201ENST00000447155 DNAAF2Q9NVR5 837 aaKnown RBP7.92□□□□□ -1.14
HMGB1P16-201ENST00000447155 PLA2G2EQ9NZK7 142 aa7.92□□□□□ -1.14
HMGB1P16-201ENST00000447155 TMEM88BA6NKF7 163 aa7.91□□□□□ -1.14
HMGB1P16-201ENST00000447155 SIAH2O43255 324 aa7.91□□□□□ -1.14
HMGB1P16-201ENST00000447155 GTF2IP78347 998 aa7.91□□□□□ -1.14
HMGB1P16-201ENST00000447155 CLDN10P78369 228 aa7.91□□□□□ -1.14
HMGB1P16-201ENST00000447155 SPRYD7Q5W111 196 aa7.91□□□□□ -1.14
HMGB1P16-201ENST00000447155 ANKMY2Q8IV38 441 aa7.91□□□□□ -1.14
HMGB1P16-201ENST00000447155 LARGE2Q8N3Y3 721 aa7.91□□□□□ -1.14
HMGB1P16-201ENST00000447155 STK32AQ8WU08 396 aa7.91□□□□□ -1.14
HMGB1P16-201ENST00000447155 TRIM52Q96A61 297 aa7.91□□□□□ -1.14
HMGB1P16-201ENST00000447155 ERVH48-1M5A8F1 160 aa7.9□□□□□ -1.14
HMGB1P16-201ENST00000447155 MYCP01106 439 aaPredicted RBP7.9□□□□□ -1.14
HMGB1P16-201ENST00000447155 FSHRP23945 695 aa7.9□□□□□ -1.14
HMGB1P16-201ENST00000447155 GRM5P41594 1212 aa7.9□□□□□ -1.14
HMGB1P16-201ENST00000447155 DHX9Q08211 1270 aaKnown RBP7.9□□□□□ -1.14
HMGB1P16-201ENST00000447155 TMEM164Q5U3C3 297 aa7.9□□□□□ -1.14
HMGB1P16-201ENST00000447155 FAM200AQ8TCP9 573 aa7.9□□□□□ -1.14
HMGB1P16-201ENST00000447155 TLL2Q9Y6L7 1015 aa7.9□□□□□ -1.14
HMGB1P16-201ENST00000447155 BRD1O95696 1058 aa7.89□□□□□ -1.15
HMGB1P16-201ENST00000447155 ADH1CP00326 375 aa7.89□□□□□ -1.15
HMGB1P16-201ENST00000447155 ZNF598Q86UK7 904 aaKnown RBP7.89□□□□□ -1.15
HMGB1P16-201ENST00000447155 AEBP1Q8IUX7 1158 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms