RNA–Protein interactions for RNA: ENST00000445866.6

SGCE-206, Transcript of sarcoglycan epsilon, humanhuman

TSL 5 BASIC

Gene SGCE, Length 1,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-206ENST00000445866 EIF4A2Q14240 407 aaKnown RBP23.32■■□□□ 1.32
SGCE-206ENST00000445866 ANKRD24Q8TF21 1146 aa23.32■■□□□ 1.32
SGCE-206ENST00000445866 NUDCQ9Y266 331 aa23.32■■□□□ 1.32
SGCE-206ENST00000445866 INSRP06213 1382 aa23.31■■□□□ 1.32
SGCE-206ENST00000445866 CSB-PGBD3P0DP91 1061 aa23.3■■□□□ 1.32
SGCE-206ENST00000445866 IL13P35225 146 aa23.3■■□□□ 1.32
SGCE-206ENST00000445866 RTL1A6NKG5 1358 aa23.3■■□□□ 1.32
SGCE-206ENST00000445866 U2SURPO15042 1029 aaKnown RBP23.29■■□□□ 1.32
SGCE-206ENST00000445866 STRN4Q9NRL3 753 aa23.29■■□□□ 1.32
SGCE-206ENST00000445866 SMG6Q86US8 1419 aaKnown RBP23.29■■□□□ 1.32
SGCE-206ENST00000445866 PNISRQ8TF01 805 aaKnown RBP23.27■■□□□ 1.32
SGCE-206ENST00000445866 COL22A1Q8NFW1 1626 aaPredicted RBP23.26■■□□□ 1.31
SGCE-206ENST00000445866 WDR43Q15061 677 aaKnown RBP eCLIP23.26■■□□□ 1.31
SGCE-206ENST00000445866 NLRP2Q9NX02 1062 aa23.25■■□□□ 1.31
SGCE-206ENST00000445866 USP54Q70EL1 1684 aa23.25■■□□□ 1.31
SGCE-206ENST00000445866 U2AF1L5P0DN76 240 aaPredicted RBP23.25■■□□□ 1.31
SGCE-206ENST00000445866 U2AF1Q01081 240 aaKnown RBP eCLIP23.25■■□□□ 1.31
SGCE-206ENST00000445866 FAM9BQ8IZU0 186 aa23.25■■□□□ 1.31
SGCE-206ENST00000445866 FNBP4Q8N3X1 1017 aaPredicted RBP23.25■■□□□ 1.31
SGCE-206ENST00000445866 CDK12Q9NYV4 1490 aaPredicted RBP23.24■■□□□ 1.31
SGCE-206ENST00000445866 EYA1Q99502 592 aa23.24■■□□□ 1.31
SGCE-206ENST00000445866 BLMP54132 1417 aaPredicted RBP23.24■■□□□ 1.31
SGCE-206ENST00000445866 MARF1Q9Y4F3 1742 aaKnown RBP23.24■■□□□ 1.31
SGCE-206ENST00000445866 ERBB3P21860 1342 aa23.23■■□□□ 1.31
SGCE-206ENST00000445866 ANKRD26Q9UPS8 1709 aa23.23■■□□□ 1.31
SGCE-206ENST00000445866 NBPF6Q5VWK0 638 aa23.22■■□□□ 1.31
SGCE-206ENST00000445866 LARP1Q6PKG0 1096 aaKnown RBP23.22■■□□□ 1.31
SGCE-206ENST00000445866 TOM1L2Q6ZVM7 507 aa23.22■■□□□ 1.31
SGCE-206ENST00000445866 UNC5CLQ8IV45 518 aa23.22■■□□□ 1.31
SGCE-206ENST00000445866 NBPF4Q96M43 638 aa23.22■■□□□ 1.31
SGCE-206ENST00000445866 ADAMTS8Q9UP79 889 aa23.22■■□□□ 1.31
SGCE-206ENST00000445866 SHPRHQ149N8 1683 aa23.22■■□□□ 1.31
SGCE-206ENST00000445866 LRP6O75581 1613 aa23.22■■□□□ 1.31
SGCE-206ENST00000445866 USP21Q9UK80 565 aa23.22■■□□□ 1.31
SGCE-206ENST00000445866 PHRF1Q9P1Y6 1649 aaKnown RBP23.2■■□□□ 1.3
SGCE-206ENST00000445866 WDR17Q8IZU2 1322 aa23.2■■□□□ 1.3
SGCE-206ENST00000445866 SULT6B1Q6IMI4 303 aa23.19■■□□□ 1.3
SGCE-206ENST00000445866 USHBP1Q8N6Y0 703 aa23.19■■□□□ 1.3
SGCE-206ENST00000445866 AFF2P51816 1311 aa23.19■■□□□ 1.3
SGCE-206ENST00000445866 CAMTA1Q9Y6Y1 1673 aa23.19■■□□□ 1.3
SGCE-206ENST00000445866 HMOX1P09601 288 aa23.19■■□□□ 1.3
SGCE-206ENST00000445866 CCDC9Q9Y3X0 531 aaKnown RBP23.19■■□□□ 1.3
SGCE-206ENST00000445866 CARD10Q9BWT7 1032 aa23.17■■□□□ 1.3
SGCE-206ENST00000445866 USP35Q9P2H5 1018 aa23.17■■□□□ 1.3
SGCE-206ENST00000445866 FCHSD2O94868 740 aa23.16■■□□□ 1.3
SGCE-206ENST00000445866 AEBP1Q8IUX7 1158 aa23.16■■□□□ 1.3
SGCE-206ENST00000445866 COL3A1P02461 1466 aaPredicted RBP23.15■■□□□ 1.3
SGCE-206ENST00000445866 PEAK1Q9H792 1746 aa23.15■■□□□ 1.3
SGCE-206ENST00000445866 CRYBG1Q9Y4K1 1723 aa23.15■■□□□ 1.3
SGCE-206ENST00000445866 IGSF1Q8N6C5 1336 aa23.15■■□□□ 1.3
SGCE-206ENST00000445866 COL5A2P05997 1499 aaPredicted RBP23.14■■□□□ 1.3
SGCE-206ENST00000445866 SLIT2O94813 1529 aa23.14■■□□□ 1.29
SGCE-206ENST00000445866 VPS72Q15906 364 aa23.13■■□□□ 1.29
SGCE-206ENST00000445866 PNNQ9H307 717 aaKnown RBP23.13■■□□□ 1.29
SGCE-206ENST00000445866 QTRT2Q9H974 415 aaKnown RBP23.13■■□□□ 1.29
SGCE-206ENST00000445866 MAP2P11137 1827 aaKnown RBP23.12■■□□□ 1.29
SGCE-206ENST00000445866 BCL9LQ86UU0 1499 aa23.12■■□□□ 1.29
SGCE-206ENST00000445866 ABCC6O95255 1503 aa23.11■■□□□ 1.29
SGCE-206ENST00000445866 RSPH6AQ9H0K4 717 aa23.11■■□□□ 1.29
SGCE-206ENST00000445866 PRKAR2BP31323 418 aa23.1■■□□□ 1.29
SGCE-206ENST00000445866 CCDC146Q8IYE0 955 aa23.1■■□□□ 1.29
SGCE-206ENST00000445866 RAPGEF4Q8WZA2 1011 aa23.1■■□□□ 1.29
SGCE-206ENST00000445866 TRPC5Q9UL62 973 aaPredicted RBP23.1■■□□□ 1.29
SGCE-206ENST00000445866 ABCA3Q99758 1704 aa23.1■■□□□ 1.29
SGCE-206ENST00000445866 SPATA31A5Q5VU36 1347 aa23.09■■□□□ 1.29
SGCE-206ENST00000445866 SPATA31A7Q8IWB4 1347 aa23.09■■□□□ 1.29
SGCE-206ENST00000445866 ZNF772Q68DY9 489 aaPredicted RBP23.09■■□□□ 1.29
SGCE-206ENST00000445866 TCP11L2Q8N4U5 519 aa23.09■■□□□ 1.29
SGCE-206ENST00000445866 CRB1P82279 1406 aa23.09■■□□□ 1.29
SGCE-206ENST00000445866 NEFMP07197 916 aa23.09■■□□□ 1.29
SGCE-206ENST00000445866 COL14A1Q05707 1796 aaKnown RBP23.08■■□□□ 1.29
SGCE-206ENST00000445866 SPATA31A1Q5TZJ5 1347 aa23.08■■□□□ 1.29
SGCE-206ENST00000445866 COL18A1P39060 1754 aa23.08■■□□□ 1.29
SGCE-206ENST00000445866 TATP17735 454 aaPredicted RBP23.07■■□□□ 1.28
SGCE-206ENST00000445866 RUNDC1Q96C34 613 aa23.07■■□□□ 1.28
SGCE-206ENST00000445866 PHF23Q9BUL5 403 aaPredicted RBP23.07■■□□□ 1.28
SGCE-206ENST00000445866 GJD4Q96KN9 370 aaPredicted RBP23.06■■□□□ 1.28
SGCE-206ENST00000445866 PLEKHF1Q96S99 279 aa23.06■■□□□ 1.28
SGCE-206ENST00000445866 THRAP3Q9Y2W1 955 aaKnown RBP23.06■■□□□ 1.28
SGCE-206ENST00000445866 PHACTR3Q96KR7 559 aa23.06■■□□□ 1.28
SGCE-206ENST00000445866 LMO7Q8WWI1 1683 aa23.06■■□□□ 1.28
SGCE-206ENST00000445866 IL2RBP14784 551 aa23.05■■□□□ 1.28
SGCE-206ENST00000445866 LTN1O94822 1766 aa23.05■■□□□ 1.28
SGCE-206ENST00000445866 KDRP35968 1356 aa23.05■■□□□ 1.28
SGCE-206ENST00000445866 MAPK8IP3Q9UPT6 1336 aa23.04■■□□□ 1.28
SGCE-206ENST00000445866 FAM98CQ17RN3 349 aaKnown RBP23.03■■□□□ 1.28
SGCE-206ENST00000445866 PLEKHO1Q53GL0 409 aaPredicted RBP23.03■■□□□ 1.28
SGCE-206ENST00000445866 SENP3-EIF4A1A0A087X0R7 540 aa23.02■■□□□ 1.28
SGCE-206ENST00000445866 APAF1O14727 1248 aa23.02■■□□□ 1.28
SGCE-206ENST00000445866 BARGINQ6ZT62 677 aa23.02■■□□□ 1.28
SGCE-206ENST00000445866 CDCA7Q9BWT1 371 aaPredicted RBP23.01■■□□□ 1.27
SGCE-206ENST00000445866 RGS17Q9UGC6 210 aaPredicted RBP23.01■■□□□ 1.27
SGCE-206ENST00000445866 AMOTQ4VCS5 1084 aa23■■□□□ 1.27
SGCE-206ENST00000445866 MTHFSDQ2M296 383 aaKnown RBP23■■□□□ 1.27
SGCE-206ENST00000445866 ZCRB1Q8TBF4 217 aaKnown RBP23■■□□□ 1.27
SGCE-206ENST00000445866 SPG7Q9UQ90 795 aa23■■□□□ 1.27
SGCE-206ENST00000445866 A0A0G2JS52 829 aa22.99■■□□□ 1.27
SGCE-206ENST00000445866 EXOC5O00471 708 aa22.99■■□□□ 1.27
SGCE-206ENST00000445866 MYT1Q01538 1121 aa22.99■■□□□ 1.27
SGCE-206ENST00000445866 NEUROD2Q15784 382 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms