RNA–Protein interactions for RNA: ENST00000445609.6

NPHP1-207, Transcript of nephrocystin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP1, Length 2,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-207ENST00000445609 PHLPP1O60346 1717 aa12.66□□□□□ -0.38
NPHP1-207ENST00000445609 KIAA0232Q92628 1395 aa12.65□□□□□ -0.38
NPHP1-207ENST00000445609 COL16A1Q07092 1604 aaPredicted RBP12.65□□□□□ -0.38
NPHP1-207ENST00000445609 SHPRHQ149N8 1683 aa12.65□□□□□ -0.38
NPHP1-207ENST00000445609 BLMP54132 1417 aaPredicted RBP12.65□□□□□ -0.39
NPHP1-207ENST00000445609 PHRF1Q9P1Y6 1649 aaKnown RBP12.64□□□□□ -0.39
NPHP1-207ENST00000445609 FCHSD2O94868 740 aa12.64□□□□□ -0.39
NPHP1-207ENST00000445609 LTV1Q96GA3 475 aaPredicted RBP12.64□□□□□ -0.39
NPHP1-207ENST00000445609 PNNQ9H307 717 aaKnown RBP12.64□□□□□ -0.39
NPHP1-207ENST00000445609 PRDM11Q9NQV5 511 aa12.64□□□□□ -0.39
NPHP1-207ENST00000445609 AXIN2Q9Y2T1 843 aa12.64□□□□□ -0.39
NPHP1-207ENST00000445609 CCDC146Q8IYE0 955 aa12.63□□□□□ -0.39
NPHP1-207ENST00000445609 CRYBG1Q9Y4K1 1723 aa12.63□□□□□ -0.39
NPHP1-207ENST00000445609 CHRNA2Q15822 529 aa12.63□□□□□ -0.39
NPHP1-207ENST00000445609 RUNDC1Q96C34 613 aa12.63□□□□□ -0.39
NPHP1-207ENST00000445609 LTN1O94822 1766 aa12.62□□□□□ -0.39
NPHP1-207ENST00000445609 HMOX1P09601 288 aa12.62□□□□□ -0.39
NPHP1-207ENST00000445609 EYA1Q99502 592 aa12.62□□□□□ -0.39
NPHP1-207ENST00000445609 ANKRD24Q8TF21 1146 aa12.61□□□□□ -0.39
NPHP1-207ENST00000445609 RSPH6AQ9H0K4 717 aa12.61□□□□□ -0.39
NPHP1-207ENST00000445609 COL22A1Q8NFW1 1626 aaPredicted RBP12.61□□□□□ -0.39
NPHP1-207ENST00000445609 JCADQ9P266 1359 aa12.61□□□□□ -0.39
NPHP1-207ENST00000445609 SULT6B1Q6IMI4 303 aa12.61□□□□□ -0.39
NPHP1-207ENST00000445609 PLEKHF1Q96S99 279 aa12.61□□□□□ -0.39
NPHP1-207ENST00000445609 IGSF1Q8N6C5 1336 aa12.6□□□□□ -0.39
NPHP1-207ENST00000445609 FAM83GA6ND36 823 aa12.6□□□□□ -0.39
NPHP1-207ENST00000445609 HSPA1LP34931 641 aa12.6□□□□□ -0.39
NPHP1-207ENST00000445609 ERBB3P21860 1342 aa12.6□□□□□ -0.39
NPHP1-207ENST00000445609 SENP3-EIF4A1A0A087X0R7 540 aa12.6□□□□□ -0.39
NPHP1-207ENST00000445609 APAF1O14727 1248 aa12.6□□□□□ -0.39
NPHP1-207ENST00000445609 PRKAR2BP31323 418 aa12.6□□□□□ -0.39
NPHP1-207ENST00000445609 ABCC6O95255 1503 aa12.6□□□□□ -0.39
NPHP1-207ENST00000445609 NEFMP07197 916 aa12.59□□□□□ -0.39
NPHP1-207ENST00000445609 ZBED9Q6R2W3 1325 aa12.59□□□□□ -0.39
NPHP1-207ENST00000445609 MAPK8IP3Q9UPT6 1336 aa12.59□□□□□ -0.39
NPHP1-207ENST00000445609 NBPF6Q5VWK0 638 aa12.59□□□□□ -0.39
NPHP1-207ENST00000445609 AEBP1Q8IUX7 1158 aa12.59□□□□□ -0.39
NPHP1-207ENST00000445609 TCP11L2Q8N4U5 519 aa12.59□□□□□ -0.39
NPHP1-207ENST00000445609 NBPF4Q96M43 638 aa12.59□□□□□ -0.39
NPHP1-207ENST00000445609 ABCA3Q99758 1704 aa12.59□□□□□ -0.39
NPHP1-207ENST00000445609 NUTM2BA6NNL0 878 aaPredicted RBP12.58□□□□□ -0.4
NPHP1-207ENST00000445609 NUTM2EB1AL46 878 aaPredicted RBP12.58□□□□□ -0.4
NPHP1-207ENST00000445609 NUTM2AQ8IVF1 878 aaPredicted RBP12.58□□□□□ -0.4
NPHP1-207ENST00000445609 NGEFQ8N5V2 710 aa12.58□□□□□ -0.4
NPHP1-207ENST00000445609 SALL2Q9Y467 1007 aaPredicted RBP12.58□□□□□ -0.4
NPHP1-207ENST00000445609 KDRP35968 1356 aa12.58□□□□□ -0.4
NPHP1-207ENST00000445609 CSB-PGBD3P0DP91 1061 aa12.57□□□□□ -0.4
NPHP1-207ENST00000445609 ADAMTS2O95450 1211 aa12.57□□□□□ -0.4
NPHP1-207ENST00000445609 COL18A1P39060 1754 aa12.57□□□□□ -0.4
NPHP1-207ENST00000445609 PHACTR3Q96KR7 559 aa12.56□□□□□ -0.4
NPHP1-207ENST00000445609 NLRP2Q9NX02 1062 aa12.56□□□□□ -0.4
NPHP1-207ENST00000445609 RGPD1P0DJD0 1748 aa12.56□□□□□ -0.4
NPHP1-207ENST00000445609 SPATA31A6Q5VVP1 1343 aa12.56□□□□□ -0.4
NPHP1-207ENST00000445609 CENPBP07199 599 aaPredicted RBP12.56□□□□□ -0.4
NPHP1-207ENST00000445609 EVA1CP58658 441 aa12.56□□□□□ -0.4
NPHP1-207ENST00000445609 USHBP1Q8N6Y0 703 aa12.56□□□□□ -0.4
NPHP1-207ENST00000445609 CAMTA1Q9Y6Y1 1673 aa12.56□□□□□ -0.4
NPHP1-207ENST00000445609 BTG4Q9NY30 223 aa12.55□□□□□ -0.4
NPHP1-207ENST00000445609 TMPOP42166 694 aaKnown RBP12.55□□□□□ -0.4
NPHP1-207ENST00000445609 NEUROD2Q15784 382 aa12.55□□□□□ -0.4
NPHP1-207ENST00000445609 NCBP3Q53F19 620 aaKnown RBP12.55□□□□□ -0.4
NPHP1-207ENST00000445609 RRP7AQ9Y3A4 280 aaKnown RBP12.55□□□□□ -0.4
NPHP1-207ENST00000445609 WDR17Q8IZU2 1322 aa12.55□□□□□ -0.4
NPHP1-207ENST00000445609 LMO7Q8WWI1 1683 aa12.54□□□□□ -0.4
NPHP1-207ENST00000445609 COL5A2P05997 1499 aaPredicted RBP12.54□□□□□ -0.4
NPHP1-207ENST00000445609 STRN4Q9NRL3 753 aa12.54□□□□□ -0.4
NPHP1-207ENST00000445609 NCAPD2Q15021 1401 aa12.53□□□□□ -0.4
NPHP1-207ENST00000445609 NFE2L2Q16236 605 aa12.53□□□□□ -0.4
NPHP1-207ENST00000445609 TOM1L2Q6ZVM7 507 aa12.53□□□□□ -0.4
NPHP1-207ENST00000445609 RIPK4P57078 832 aa12.53□□□□□ -0.4
NPHP1-207ENST00000445609 CCDC27Q2M243 656 aa12.53□□□□□ -0.4
NPHP1-207ENST00000445609 COL14A1Q05707 1796 aaKnown RBP12.52□□□□□ -0.41
NPHP1-207ENST00000445609 LARP1Q6PKG0 1096 aaKnown RBP12.52□□□□□ -0.41
NPHP1-207ENST00000445609 WWC1Q8IX03 1113 aa12.52□□□□□ -0.41
NPHP1-207ENST00000445609 RGPD5Q99666 1765 aa12.51□□□□□ -0.41
NPHP1-207ENST00000445609 PDE3BQ13370 1112 aa12.51□□□□□ -0.41
NPHP1-207ENST00000445609 PHF23Q9BUL5 403 aaPredicted RBP12.51□□□□□ -0.41
NPHP1-207ENST00000445609 CARD10Q9BWT7 1032 aa12.51□□□□□ -0.41
NPHP1-207ENST00000445609 ZNF521Q96K83 1311 aa12.51□□□□□ -0.41
NPHP1-207ENST00000445609 RAPGEF4Q8WZA2 1011 aa12.51□□□□□ -0.41
NPHP1-207ENST00000445609 MTHFSDQ2M296 383 aaKnown RBP12.5□□□□□ -0.41
NPHP1-207ENST00000445609 GAS2L2Q8NHY3 880 aa12.5□□□□□ -0.41
NPHP1-207ENST00000445609 NGLY1Q96IV0 654 aa12.5□□□□□ -0.41
NPHP1-207ENST00000445609 C8orf37Q96NL8 207 aa12.5□□□□□ -0.41
NPHP1-207ENST00000445609 TRIM35Q9UPQ4 493 aa12.5□□□□□ -0.41
NPHP1-207ENST00000445609 AMOTQ4VCS5 1084 aa12.49□□□□□ -0.41
NPHP1-207ENST00000445609 PLEKHO1Q53GL0 409 aaPredicted RBP12.49□□□□□ -0.41
NPHP1-207ENST00000445609 CRB1P82279 1406 aa12.49□□□□□ -0.41
NPHP1-207ENST00000445609 GOLGA2Q08379 1002 aa12.49□□□□□ -0.41
NPHP1-207ENST00000445609 LMOD3Q0VAK6 560 aa12.49□□□□□ -0.41
NPHP1-207ENST00000445609 FBXO41Q8TF61 875 aa12.49□□□□□ -0.41
NPHP1-207ENST00000445609 FAM208AQ9UK61 1670 aaKnown RBP12.48□□□□□ -0.41
NPHP1-207ENST00000445609 TATP17735 454 aaPredicted RBP12.48□□□□□ -0.41
NPHP1-207ENST00000445609 WDR63Q8IWG1 891 aa12.48□□□□□ -0.41
NPHP1-207ENST00000445609 LRP6O75581 1613 aa12.48□□□□□ -0.41
NPHP1-207ENST00000445609 SLIT2O94813 1529 aa12.48□□□□□ -0.41
NPHP1-207ENST00000445609 MEX3CQ5U5Q3 659 aaKnown RBP12.48□□□□□ -0.41
NPHP1-207ENST00000445609 RGPD2P0DJD1 1756 aa12.47□□□□□ -0.41
NPHP1-207ENST00000445609 FNBP4Q8N3X1 1017 aaPredicted RBP12.47□□□□□ -0.41
NPHP1-207ENST00000445609 UNC5CLQ8IV45 518 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms