RNA–Protein interactions for RNA: ENST00000444508.5

SMARCAL1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 711 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-209ENST00000444508 ABCC6O95255 1503 aa24.03■■□□□ 1.44
SMARCAL1-209ENST00000444508 SPATA31A5Q5VU36 1347 aa24.03■■□□□ 1.44
SMARCAL1-209ENST00000444508 SPATA31A7Q8IWB4 1347 aa24.03■■□□□ 1.44
SMARCAL1-209ENST00000444508 ZEB1P37275 1124 aaPredicted RBP24.02■■□□□ 1.44
SMARCAL1-209ENST00000444508 CCDC7Q96M83 1385 aa24.02■■□□□ 1.44
SMARCAL1-209ENST00000444508 AXIN2Q9Y2T1 843 aa24■■□□□ 1.43
SMARCAL1-209ENST00000444508 LARP1Q6PKG0 1096 aaKnown RBP23.99■■□□□ 1.43
SMARCAL1-209ENST00000444508 SPATA31A1Q5TZJ5 1347 aa23.99■■□□□ 1.43
SMARCAL1-209ENST00000444508 RGPD5Q99666 1765 aa23.98■■□□□ 1.43
SMARCAL1-209ENST00000444508 A0A0G2JS52 829 aa23.98■■□□□ 1.43
SMARCAL1-209ENST00000444508 MYT1Q01538 1121 aa23.98■■□□□ 1.43
SMARCAL1-209ENST00000444508 FAM98CQ17RN3 349 aaKnown RBP23.98■■□□□ 1.43
SMARCAL1-209ENST00000444508 WASHC2AQ641Q2 1341 aa23.98■■□□□ 1.43
SMARCAL1-209ENST00000444508 USP35Q9P2H5 1018 aa23.97■■□□□ 1.43
SMARCAL1-209ENST00000444508 CRB1P82279 1406 aa23.96■■□□□ 1.43
SMARCAL1-209ENST00000444508 ONECUT3O60422 494 aaPredicted RBP23.96■■□□□ 1.43
SMARCAL1-209ENST00000444508 CSB-PGBD3P0DP91 1061 aa23.96■■□□□ 1.43
SMARCAL1-209ENST00000444508 SEPT12Q8IYM1 358 aa23.96■■□□□ 1.43
SMARCAL1-209ENST00000444508 KNSTRNQ9Y448 316 aa23.96■■□□□ 1.43
SMARCAL1-209ENST00000444508 WDR17Q8IZU2 1322 aa23.95■■□□□ 1.42
SMARCAL1-209ENST00000444508 TOM1L2Q6ZVM7 507 aa23.95■■□□□ 1.42
SMARCAL1-209ENST00000444508 MAP3K19Q56UN5 1328 aa23.94■■□□□ 1.42
SMARCAL1-209ENST00000444508 ANKRD26Q9UPS8 1709 aa23.94■■□□□ 1.42
SMARCAL1-209ENST00000444508 AMPHP49418 695 aa23.94■■□□□ 1.42
SMARCAL1-209ENST00000444508 NSD2O96028 1365 aa23.93■■□□□ 1.42
SMARCAL1-209ENST00000444508 FBLN1P23142 703 aa23.93■■□□□ 1.42
SMARCAL1-209ENST00000444508 TCP11L2Q8N4U5 519 aa23.93■■□□□ 1.42
SMARCAL1-209ENST00000444508 IP6K1Q92551 441 aa23.93■■□□□ 1.42
SMARCAL1-209ENST00000444508 BLMP54132 1417 aaPredicted RBP23.93■■□□□ 1.42
SMARCAL1-209ENST00000444508 RRS1Q15050 365 aaKnown RBP23.92■■□□□ 1.42
SMARCAL1-209ENST00000444508 THRAP3Q9Y2W1 955 aaKnown RBP23.92■■□□□ 1.42
SMARCAL1-209ENST00000444508 RTL1A6NKG5 1358 aa23.91■■□□□ 1.42
SMARCAL1-209ENST00000444508 BRWD3Q6RI45 1802 aa23.9■■□□□ 1.42
SMARCAL1-209ENST00000444508 BARGINQ6ZT62 677 aa23.9■■□□□ 1.42
SMARCAL1-209ENST00000444508 THSD7AQ9UPZ6 1657 aa23.89■■□□□ 1.42
SMARCAL1-209ENST00000444508 ERBB3P21860 1342 aa23.89■■□□□ 1.42
SMARCAL1-209ENST00000444508 HOXC9P31274 260 aa23.89■■□□□ 1.41
SMARCAL1-209ENST00000444508 ANKRD24Q8TF21 1146 aa23.89■■□□□ 1.41
SMARCAL1-209ENST00000444508 CARD10Q9BWT7 1032 aa23.88■■□□□ 1.41
SMARCAL1-209ENST00000444508 KRT27Q7Z3Y8 459 aa23.86■■□□□ 1.41
SMARCAL1-209ENST00000444508 NLRP2Q9NX02 1062 aa23.86■■□□□ 1.41
SMARCAL1-209ENST00000444508 KIF24Q5T7B8 1368 aa23.86■■□□□ 1.41
SMARCAL1-209ENST00000444508 TNNT2P45379 298 aaPredicted RBP23.85■■□□□ 1.41
SMARCAL1-209ENST00000444508 MORC1Q86VD1 984 aa23.85■■□□□ 1.41
SMARCAL1-209ENST00000444508 LTV1Q96GA3 475 aaPredicted RBP23.85■■□□□ 1.41
SMARCAL1-209ENST00000444508 FLT4P35916 1363 aa23.85■■□□□ 1.41
SMARCAL1-209ENST00000444508 FAM208AQ9UK61 1670 aaKnown RBP23.84■■□□□ 1.41
SMARCAL1-209ENST00000444508 MAP2P11137 1827 aaKnown RBP23.83■■□□□ 1.41
SMARCAL1-209ENST00000444508 PPM1GO15355 546 aaPredicted RBP23.83■■□□□ 1.41
SMARCAL1-209ENST00000444508 PER1O15534 1290 aaPredicted RBP23.83■■□□□ 1.41
SMARCAL1-209ENST00000444508 AMER1Q5JTC6 1135 aaPredicted RBP23.83■■□□□ 1.41
SMARCAL1-209ENST00000444508 EMILIN1Q9Y6C2 1016 aa23.83■■□□□ 1.41
SMARCAL1-209ENST00000444508 SMG6Q86US8 1419 aaKnown RBP23.83■■□□□ 1.4
SMARCAL1-209ENST00000444508 PEAK1Q9H792 1746 aa23.82■■□□□ 1.4
SMARCAL1-209ENST00000444508 CDCA7Q9BWT1 371 aaPredicted RBP23.82■■□□□ 1.4
SMARCAL1-209ENST00000444508 WNK3Q9BYP7 1800 aa23.82■■□□□ 1.4
SMARCAL1-209ENST00000444508 PARP4Q9UKK3 1724 aaKnown RBP23.81■■□□□ 1.4
SMARCAL1-209ENST00000444508 INSRP06213 1382 aa23.8■■□□□ 1.4
SMARCAL1-209ENST00000444508 PDE3BQ13370 1112 aa23.8■■□□□ 1.4
SMARCAL1-209ENST00000444508 UPF1Q92900 1129 aaKnown RBP eCLIP23.8■■□□□ 1.4
SMARCAL1-209ENST00000444508 HSP90AB2PQ58FF8 381 aa23.79■■□□□ 1.4
SMARCAL1-209ENST00000444508 POLKQ9UBT6 870 aa23.79■■□□□ 1.4
SMARCAL1-209ENST00000444508 CC2D1BQ5T0F9 858 aaKnown RBP23.77■■□□□ 1.4
SMARCAL1-209ENST00000444508 NPC1L1Q9UHC9 1359 aa23.77■■□□□ 1.4
SMARCAL1-209ENST00000444508 EP400Q96L91 3159 aa23.76■■□□□ 1.39
SMARCAL1-209ENST00000444508 DDB1Q16531 1140 aa23.76■■□□□ 1.39
SMARCAL1-209ENST00000444508 LRRC37A3O60309 1634 aa23.76■■□□□ 1.39
SMARCAL1-209ENST00000444508 DISP2A7MBM2 1401 aa23.76■■□□□ 1.39
SMARCAL1-209ENST00000444508 IL2RBP14784 551 aa23.74■■□□□ 1.39
SMARCAL1-209ENST00000444508 RGPD2P0DJD1 1756 aa23.73■■□□□ 1.39
SMARCAL1-209ENST00000444508 CNGB1Q14028 1251 aaPredicted RBP23.73■■□□□ 1.39
SMARCAL1-209ENST00000444508 FAM182BQ5T319 152 aa23.72■■□□□ 1.39
SMARCAL1-209ENST00000444508 EXOC5O00471 708 aa23.71■■□□□ 1.39
SMARCAL1-209ENST00000444508 NBPF6Q5VWK0 638 aa23.71■■□□□ 1.39
SMARCAL1-209ENST00000444508 FAM196AQ6ZSG2 479 aa23.71■■□□□ 1.39
SMARCAL1-209ENST00000444508 CCDC125Q86Z20 511 aa23.71■■□□□ 1.39
SMARCAL1-209ENST00000444508 NBPF4Q96M43 638 aa23.71■■□□□ 1.39
SMARCAL1-209ENST00000444508 TNS2Q63HR2 1409 aa23.68■■□□□ 1.38
SMARCAL1-209ENST00000444508 SF3B2Q13435 895 aaKnown RBP23.68■■□□□ 1.38
SMARCAL1-209ENST00000444508 USHBP1Q8N6Y0 703 aa23.68■■□□□ 1.38
SMARCAL1-209ENST00000444508 OVOS2A0A0G2JMS6 1433 aa23.67■■□□□ 1.38
SMARCAL1-209ENST00000444508 EIF4A2Q14240 407 aaKnown RBP23.65■■□□□ 1.38
SMARCAL1-209ENST00000444508 RAPGEF4Q8WZA2 1011 aa23.65■■□□□ 1.38
SMARCAL1-209ENST00000444508 MARCH10Q8NA82 808 aaPredicted RBP23.64■■□□□ 1.37
SMARCAL1-209ENST00000444508 RGPD1P0DJD0 1748 aa23.64■■□□□ 1.37
SMARCAL1-209ENST00000444508 MTHFSP49914 203 aa23.63■■□□□ 1.37
SMARCAL1-209ENST00000444508 TATP17735 454 aaPredicted RBP23.62■■□□□ 1.37
SMARCAL1-209ENST00000444508 DDX10Q13206 875 aaKnown RBP23.62■■□□□ 1.37
SMARCAL1-209ENST00000444508 EYA1Q99502 592 aa23.62■■□□□ 1.37
SMARCAL1-209ENST00000444508 MEGF6O75095 1541 aa23.62■■□□□ 1.37
SMARCAL1-209ENST00000444508 NCAPD2Q15021 1401 aa23.6■■□□□ 1.37
SMARCAL1-209ENST00000444508 TRIM37O94972 964 aa23.6■■□□□ 1.37
SMARCAL1-209ENST00000444508 ZCRB1Q8TBF4 217 aaKnown RBP23.59■■□□□ 1.37
SMARCAL1-209ENST00000444508 DDX54Q8TDD1 881 aaKnown RBP23.58■■□□□ 1.37
SMARCAL1-209ENST00000444508 BCL9O00512 1426 aa23.58■■□□□ 1.36
SMARCAL1-209ENST00000444508 TNS1Q9HBL0 1735 aaKnown RBP23.57■■□□□ 1.36
SMARCAL1-209ENST00000444508 BAG6P46379 1132 aa23.57■■□□□ 1.36
SMARCAL1-209ENST00000444508 IGSF1Q8N6C5 1336 aa23.57■■□□□ 1.36
SMARCAL1-209ENST00000444508 SBF2Q86WG5 1849 aa23.55■■□□□ 1.36
SMARCAL1-209ENST00000444508 IL13P35225 146 aa23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms