RNA–Protein interactions for RNA: ENST00000440915.1

AP004290.1-201, humanhuman

BASIC

Gene AP004290.1, Length 1,412 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004290.1-201ENST00000440915 ARHGEF25Q86VW2 580 aa13.77□□□□□ -0.21
AP004290.1-201ENST00000440915 LTN1O94822 1766 aa13.77□□□□□ -0.21
AP004290.1-201ENST00000440915 FLT4P35916 1363 aa13.76□□□□□ -0.21
AP004290.1-201ENST00000440915 HOXC9P31274 260 aa13.76□□□□□ -0.21
AP004290.1-201ENST00000440915 ZC3H6P61129 1189 aaKnown RBP13.76□□□□□ -0.21
AP004290.1-201ENST00000440915 COL22A1Q8NFW1 1626 aaPredicted RBP13.76□□□□□ -0.21
AP004290.1-201ENST00000440915 RTL1A6NKG5 1358 aa13.76□□□□□ -0.21
AP004290.1-201ENST00000440915 ABCA3Q99758 1704 aa13.76□□□□□ -0.21
AP004290.1-201ENST00000440915 ZBTB7CA1YPR0 619 aa13.75□□□□□ -0.21
AP004290.1-201ENST00000440915 HSP90AB2PQ58FF8 381 aa13.75□□□□□ -0.21
AP004290.1-201ENST00000440915 IL13P35225 146 aa13.74□□□□□ -0.21
AP004290.1-201ENST00000440915 IP6K1Q92551 441 aa13.74□□□□□ -0.21
AP004290.1-201ENST00000440915 ADAMTS8Q9UP79 889 aa13.74□□□□□ -0.21
AP004290.1-201ENST00000440915 NUDCQ9Y266 331 aa13.74□□□□□ -0.21
AP004290.1-201ENST00000440915 HAP1P54257 671 aaPredicted RBP13.73□□□□□ -0.21
AP004290.1-201ENST00000440915 EIF4A2Q14240 407 aaKnown RBP13.73□□□□□ -0.21
AP004290.1-201ENST00000440915 YTHDC1Q96MU7 727 aaKnown RBP13.73□□□□□ -0.21
AP004290.1-201ENST00000440915 CPDO75976 1380 aa13.72□□□□□ -0.21
AP004290.1-201ENST00000440915 U2SURPO15042 1029 aaKnown RBP13.72□□□□□ -0.21
AP004290.1-201ENST00000440915 KIAA0232Q92628 1395 aa13.71□□□□□ -0.21
AP004290.1-201ENST00000440915 COL18A1P39060 1754 aa13.71□□□□□ -0.21
AP004290.1-201ENST00000440915 U2AF1L5P0DN76 240 aaPredicted RBP13.71□□□□□ -0.22
AP004290.1-201ENST00000440915 U2AF1Q01081 240 aaKnown RBP eCLIP13.71□□□□□ -0.22
AP004290.1-201ENST00000440915 HSPA1LP34931 641 aa13.7□□□□□ -0.22
AP004290.1-201ENST00000440915 CHRNA2Q15822 529 aa13.7□□□□□ -0.22
AP004290.1-201ENST00000440915 AXIN2Q9Y2T1 843 aa13.7□□□□□ -0.22
AP004290.1-201ENST00000440915 BLMP54132 1417 aaPredicted RBP13.7□□□□□ -0.22
AP004290.1-201ENST00000440915 ABCC6O95255 1503 aa13.7□□□□□ -0.22
AP004290.1-201ENST00000440915 LTV1Q96GA3 475 aaPredicted RBP13.69□□□□□ -0.22
AP004290.1-201ENST00000440915 JCADQ9P266 1359 aa13.69□□□□□ -0.22
AP004290.1-201ENST00000440915 RGPD1P0DJD0 1748 aa13.68□□□□□ -0.22
AP004290.1-201ENST00000440915 PRDM11Q9NQV5 511 aa13.68□□□□□ -0.22
AP004290.1-201ENST00000440915 RGPD5Q99666 1765 aa13.68□□□□□ -0.22
AP004290.1-201ENST00000440915 CCDC146Q8IYE0 955 aa13.67□□□□□ -0.22
AP004290.1-201ENST00000440915 ANKRD24Q8TF21 1146 aa13.67□□□□□ -0.22
AP004290.1-201ENST00000440915 IGSF1Q8N6C5 1336 aa13.66□□□□□ -0.22
AP004290.1-201ENST00000440915 FAM83GA6ND36 823 aa13.66□□□□□ -0.22
AP004290.1-201ENST00000440915 FCHSD2O94868 740 aa13.66□□□□□ -0.22
AP004290.1-201ENST00000440915 HMOX1P09601 288 aa13.66□□□□□ -0.22
AP004290.1-201ENST00000440915 HNRNPUQ00839 825 aaKnown RBP eCLIP13.66□□□□□ -0.22
AP004290.1-201ENST00000440915 EYA1Q99502 592 aa13.66□□□□□ -0.22
AP004290.1-201ENST00000440915 LMO7Q8WWI1 1683 aa13.66□□□□□ -0.22
AP004290.1-201ENST00000440915 NUTM2BA6NNL0 878 aaPredicted RBP13.65□□□□□ -0.22
AP004290.1-201ENST00000440915 NUTM2EB1AL46 878 aaPredicted RBP13.65□□□□□ -0.22
AP004290.1-201ENST00000440915 NUTM2AQ8IVF1 878 aaPredicted RBP13.65□□□□□ -0.22
AP004290.1-201ENST00000440915 RUNDC1Q96C34 613 aa13.65□□□□□ -0.22
AP004290.1-201ENST00000440915 RSPH6AQ9H0K4 717 aa13.65□□□□□ -0.22
AP004290.1-201ENST00000440915 PNNQ9H307 717 aaKnown RBP13.65□□□□□ -0.22
AP004290.1-201ENST00000440915 CAMTA1Q9Y6Y1 1673 aa13.65□□□□□ -0.22
AP004290.1-201ENST00000440915 ERBB3P21860 1342 aa13.65□□□□□ -0.22
AP004290.1-201ENST00000440915 SULT6B1Q6IMI4 303 aa13.64□□□□□ -0.23
AP004290.1-201ENST00000440915 PLEKHF1Q96S99 279 aa13.64□□□□□ -0.23
AP004290.1-201ENST00000440915 COL14A1Q05707 1796 aaKnown RBP13.64□□□□□ -0.23
AP004290.1-201ENST00000440915 SENP3-EIF4A1A0A087X0R7 540 aa13.64□□□□□ -0.23
AP004290.1-201ENST00000440915 ADAMTS2O95450 1211 aa13.64□□□□□ -0.23
AP004290.1-201ENST00000440915 NBPF6Q5VWK0 638 aa13.64□□□□□ -0.23
AP004290.1-201ENST00000440915 AEBP1Q8IUX7 1158 aa13.64□□□□□ -0.23
AP004290.1-201ENST00000440915 NBPF4Q96M43 638 aa13.64□□□□□ -0.23
AP004290.1-201ENST00000440915 SPATA31A6Q5VVP1 1343 aa13.63□□□□□ -0.23
AP004290.1-201ENST00000440915 APAF1O14727 1248 aa13.63□□□□□ -0.23
AP004290.1-201ENST00000440915 PRKAR2BP31323 418 aa13.63□□□□□ -0.23
AP004290.1-201ENST00000440915 RGPD2P0DJD1 1756 aa13.63□□□□□ -0.23
AP004290.1-201ENST00000440915 COL5A2P05997 1499 aaPredicted RBP13.62□□□□□ -0.23
AP004290.1-201ENST00000440915 USHBP1Q8N6Y0 703 aa13.62□□□□□ -0.23
AP004290.1-201ENST00000440915 KDRP35968 1356 aa13.61□□□□□ -0.23
AP004290.1-201ENST00000440915 FAM208AQ9UK61 1670 aaKnown RBP13.61□□□□□ -0.23
AP004290.1-201ENST00000440915 MAPK8IP3Q9UPT6 1336 aa13.61□□□□□ -0.23
AP004290.1-201ENST00000440915 CSB-PGBD3P0DP91 1061 aa13.61□□□□□ -0.23
AP004290.1-201ENST00000440915 BTG4Q9NY30 223 aa13.61□□□□□ -0.23
AP004290.1-201ENST00000440915 NCAPD2Q15021 1401 aa13.6□□□□□ -0.23
AP004290.1-201ENST00000440915 EVA1CP58658 441 aa13.6□□□□□ -0.23
AP004290.1-201ENST00000440915 TCP11L2Q8N4U5 519 aa13.6□□□□□ -0.23
AP004290.1-201ENST00000440915 SALL2Q9Y467 1007 aaPredicted RBP13.6□□□□□ -0.23
AP004290.1-201ENST00000440915 WDR17Q8IZU2 1322 aa13.59□□□□□ -0.23
AP004290.1-201ENST00000440915 PLCH1Q4KWH8 1693 aa13.59□□□□□ -0.23
AP004290.1-201ENST00000440915 LRP6O75581 1613 aa13.59□□□□□ -0.23
AP004290.1-201ENST00000440915 NEFMP07197 916 aa13.59□□□□□ -0.23
AP004290.1-201ENST00000440915 PHACTR3Q96KR7 559 aa13.59□□□□□ -0.23
AP004290.1-201ENST00000440915 NLRP2Q9NX02 1062 aa13.59□□□□□ -0.23
AP004290.1-201ENST00000440915 ZBED9Q6R2W3 1325 aa13.59□□□□□ -0.23
AP004290.1-201ENST00000440915 FBXO41Q8TF61 875 aa13.58□□□□□ -0.24
AP004290.1-201ENST00000440915 STRN4Q9NRL3 753 aa13.58□□□□□ -0.24
AP004290.1-201ENST00000440915 SLC4A2P04920 1241 aa13.57□□□□□ -0.24
AP004290.1-201ENST00000440915 TMPOP42166 694 aaKnown RBP13.57□□□□□ -0.24
AP004290.1-201ENST00000440915 LARP1Q6PKG0 1096 aaKnown RBP13.57□□□□□ -0.24
AP004290.1-201ENST00000440915 TOM1L2Q6ZVM7 507 aa13.57□□□□□ -0.24
AP004290.1-201ENST00000440915 RRP7AQ9Y3A4 280 aaKnown RBP13.57□□□□□ -0.24
AP004290.1-201ENST00000440915 NEUROD2Q15784 382 aa13.56□□□□□ -0.24
AP004290.1-201ENST00000440915 NGEFQ8N5V2 710 aa13.56□□□□□ -0.24
AP004290.1-201ENST00000440915 NRAPQ86VF7 1730 aa13.56□□□□□ -0.24
AP004290.1-201ENST00000440915 SLIT2O94813 1529 aa13.56□□□□□ -0.24
AP004290.1-201ENST00000440915 NFE2L2Q16236 605 aa13.56□□□□□ -0.24
AP004290.1-201ENST00000440915 C8orf37Q96NL8 207 aa13.56□□□□□ -0.24
AP004290.1-201ENST00000440915 CRB1P82279 1406 aa13.55□□□□□ -0.24
AP004290.1-201ENST00000440915 NWD2Q9ULI1 1742 aa13.55□□□□□ -0.24
AP004290.1-201ENST00000440915 RIPK4P57078 832 aa13.55□□□□□ -0.24
AP004290.1-201ENST00000440915 NGLY1Q96IV0 654 aa13.55□□□□□ -0.24
AP004290.1-201ENST00000440915 CARD10Q9BWT7 1032 aa13.55□□□□□ -0.24
AP004290.1-201ENST00000440915 CCDC27Q2M243 656 aa13.54□□□□□ -0.24
AP004290.1-201ENST00000440915 MTHFSDQ2M296 383 aaKnown RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms