RNA–Protein interactions for RNA: ENST00000440571.5

CNOT3-203, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 5

Gene CNOT3, Length 1,125 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-203ENST00000440571 USP35Q9P2H5 1018 aa30.89■■■□□ 2.54
CNOT3-203ENST00000440571 CSB-PGBD3P0DP91 1061 aa30.88■■■□□ 2.53
CNOT3-203ENST00000440571 AMPHP49418 695 aa30.88■■■□□ 2.53
CNOT3-203ENST00000440571 FAM98CQ17RN3 349 aaKnown RBP30.88■■■□□ 2.53
CNOT3-203ENST00000440571 IP6K1Q92551 441 aa30.88■■■□□ 2.53
CNOT3-203ENST00000440571 SPATA31A1Q5TZJ5 1347 aa30.88■■■□□ 2.53
CNOT3-203ENST00000440571 TNKS1BP1Q9C0C2 1729 aaKnown RBP30.87■■■□□ 2.53
CNOT3-203ENST00000440571 MAP3K19Q56UN5 1328 aa30.87■■■□□ 2.53
CNOT3-203ENST00000440571 RRS1Q15050 365 aaKnown RBP30.86■■■□□ 2.53
CNOT3-203ENST00000440571 TOM1L2Q6ZVM7 507 aa30.86■■■□□ 2.53
CNOT3-203ENST00000440571 SEPT12Q8IYM1 358 aa30.86■■■□□ 2.53
CNOT3-203ENST00000440571 USP54Q70EL1 1684 aa30.85■■■□□ 2.53
CNOT3-203ENST00000440571 A0A0G2JS52 829 aa30.85■■■□□ 2.53
CNOT3-203ENST00000440571 MYT1Q01538 1121 aa30.85■■■□□ 2.53
CNOT3-203ENST00000440571 COL5A2P05997 1499 aaPredicted RBP30.84■■■□□ 2.53
CNOT3-203ENST00000440571 RGS12O14924 1447 aa30.84■■■□□ 2.53
CNOT3-203ENST00000440571 WDR17Q8IZU2 1322 aa30.83■■■□□ 2.53
CNOT3-203ENST00000440571 PER1O15534 1290 aaPredicted RBP30.83■■■□□ 2.53
CNOT3-203ENST00000440571 TCP11L2Q8N4U5 519 aa30.83■■■□□ 2.53
CNOT3-203ENST00000440571 LMO7Q8WWI1 1683 aa30.82■■■□□ 2.52
CNOT3-203ENST00000440571 NRAPQ86VF7 1730 aa30.81■■■□□ 2.52
CNOT3-203ENST00000440571 HOXC9P31274 260 aa30.81■■■□□ 2.52
CNOT3-203ENST00000440571 MORC1Q86VD1 984 aa30.81■■■□□ 2.52
CNOT3-203ENST00000440571 ANKRD24Q8TF21 1146 aa30.81■■■□□ 2.52
CNOT3-203ENST00000440571 THRAP3Q9Y2W1 955 aaKnown RBP30.81■■■□□ 2.52
CNOT3-203ENST00000440571 GLI3P10071 1580 aa30.8■■■□□ 2.52
CNOT3-203ENST00000440571 TNNT2P45379 298 aaPredicted RBP30.8■■■□□ 2.52
CNOT3-203ENST00000440571 NSD2O96028 1365 aa30.79■■■□□ 2.52
CNOT3-203ENST00000440571 AMER1Q5JTC6 1135 aaPredicted RBP30.79■■■□□ 2.52
CNOT3-203ENST00000440571 BARGINQ6ZT62 677 aa30.79■■■□□ 2.52
CNOT3-203ENST00000440571 LTV1Q96GA3 475 aaPredicted RBP30.78■■■□□ 2.52
CNOT3-203ENST00000440571 CARD10Q9BWT7 1032 aa30.78■■■□□ 2.52
CNOT3-203ENST00000440571 CRB1P82279 1406 aa30.78■■■□□ 2.52
CNOT3-203ENST00000440571 COL18A1P39060 1754 aa30.77■■■□□ 2.52
CNOT3-203ENST00000440571 PPM1GO15355 546 aaPredicted RBP30.76■■■□□ 2.51
CNOT3-203ENST00000440571 NLRP2Q9NX02 1062 aa30.76■■■□□ 2.51
CNOT3-203ENST00000440571 ERBB3P21860 1342 aa30.75■■■□□ 2.51
CNOT3-203ENST00000440571 BLMP54132 1417 aaPredicted RBP30.74■■■□□ 2.51
CNOT3-203ENST00000440571 ABCC6O95255 1503 aa30.74■■■□□ 2.51
CNOT3-203ENST00000440571 EMILIN1Q9Y6C2 1016 aa30.74■■■□□ 2.51
CNOT3-203ENST00000440571 POLKQ9UBT6 870 aa30.73■■■□□ 2.51
CNOT3-203ENST00000440571 KIF20BQ96Q89 1820 aa30.73■■■□□ 2.51
CNOT3-203ENST00000440571 CC2D1BQ5T0F9 858 aaKnown RBP30.72■■■□□ 2.51
CNOT3-203ENST00000440571 KRT27Q7Z3Y8 459 aa30.72■■■□□ 2.51
CNOT3-203ENST00000440571 RTL1A6NKG5 1358 aa30.71■■■□□ 2.51
CNOT3-203ENST00000440571 HSP90AB2PQ58FF8 381 aa30.71■■■□□ 2.51
CNOT3-203ENST00000440571 CNGB1Q14028 1251 aaPredicted RBP30.7■■■□□ 2.51
CNOT3-203ENST00000440571 KIF24Q5T7B8 1368 aa30.69■■■□□ 2.5
CNOT3-203ENST00000440571 FLT4P35916 1363 aa30.68■■■□□ 2.5
CNOT3-203ENST00000440571 CDCA7Q9BWT1 371 aaPredicted RBP30.67■■■□□ 2.5
CNOT3-203ENST00000440571 INSRP06213 1382 aa30.66■■■□□ 2.5
CNOT3-203ENST00000440571 PDE3BQ13370 1112 aa30.65■■■□□ 2.5
CNOT3-203ENST00000440571 LTN1O94822 1766 aa30.64■■■□□ 2.5
CNOT3-203ENST00000440571 UPF1Q92900 1129 aaKnown RBP eCLIP30.63■■■□□ 2.49
CNOT3-203ENST00000440571 NPC1L1Q9UHC9 1359 aa30.63■■■□□ 2.49
CNOT3-203ENST00000440571 SMG6Q86US8 1419 aaKnown RBP30.61■■■□□ 2.49
CNOT3-203ENST00000440571 RGPD5Q99666 1765 aa30.61■■■□□ 2.49
CNOT3-203ENST00000440571 DDX10Q13206 875 aaKnown RBP30.6■■■□□ 2.49
CNOT3-203ENST00000440571 DDB1Q16531 1140 aa30.6■■■□□ 2.49
CNOT3-203ENST00000440571 NBPF6Q5VWK0 638 aa30.6■■■□□ 2.49
CNOT3-203ENST00000440571 NBPF4Q96M43 638 aa30.6■■■□□ 2.49
CNOT3-203ENST00000440571 EXOC5O00471 708 aa30.59■■■□□ 2.49
CNOT3-203ENST00000440571 IL2RBP14784 551 aa30.59■■■□□ 2.49
CNOT3-203ENST00000440571 FAM182BQ5T319 152 aa30.58■■■□□ 2.49
CNOT3-203ENST00000440571 MTHFSP49914 203 aa30.54■■■□□ 2.48
CNOT3-203ENST00000440571 USHBP1Q8N6Y0 703 aa30.54■■■□□ 2.48
CNOT3-203ENST00000440571 THSD7AQ9UPZ6 1657 aa30.53■■■□□ 2.48
CNOT3-203ENST00000440571 FAM196AQ6ZSG2 479 aa30.53■■■□□ 2.48
CNOT3-203ENST00000440571 EIF4A2Q14240 407 aaKnown RBP30.52■■■□□ 2.48
CNOT3-203ENST00000440571 CCDC125Q86Z20 511 aa30.52■■■□□ 2.48
CNOT3-203ENST00000440571 ANKRD26Q9UPS8 1709 aa30.52■■■□□ 2.48
CNOT3-203ENST00000440571 PEAK1Q9H792 1746 aa30.51■■■□□ 2.47
CNOT3-203ENST00000440571 DISP2A7MBM2 1401 aa30.51■■■□□ 2.47
CNOT3-203ENST00000440571 EYA1Q99502 592 aa30.5■■■□□ 2.47
CNOT3-203ENST00000440571 RAPGEF4Q8WZA2 1011 aa30.49■■■□□ 2.47
CNOT3-203ENST00000440571 ZNF316A6NFI3 1004 aaPredicted RBP30.48■■■□□ 2.47
CNOT3-203ENST00000440571 MAP2P11137 1827 aaKnown RBP30.47■■■□□ 2.47
CNOT3-203ENST00000440571 MARCH10Q8NA82 808 aaPredicted RBP30.47■■■□□ 2.47
CNOT3-203ENST00000440571 BRWD3Q6RI45 1802 aa30.46■■■□□ 2.47
CNOT3-203ENST00000440571 SF3B2Q13435 895 aaKnown RBP30.46■■■□□ 2.47
CNOT3-203ENST00000440571 TATP17735 454 aaPredicted RBP30.45■■■□□ 2.47
CNOT3-203ENST00000440571 ZCRB1Q8TBF4 217 aaKnown RBP30.43■■■□□ 2.46
CNOT3-203ENST00000440571 DDX54Q8TDD1 881 aaKnown RBP30.42■■■□□ 2.46
CNOT3-203ENST00000440571 IL13P35225 146 aa30.41■■■□□ 2.46
CNOT3-203ENST00000440571 TRIM37O94972 964 aa30.4■■■□□ 2.46
CNOT3-203ENST00000440571 PPP2R1AP30153 589 aa30.4■■■□□ 2.46
CNOT3-203ENST00000440571 FAM208AQ9UK61 1670 aaKnown RBP30.39■■■□□ 2.46
CNOT3-203ENST00000440571 PARP4Q9UKK3 1724 aaKnown RBP30.39■■■□□ 2.45
CNOT3-203ENST00000440571 DIAPH1O60610 1272 aaKnown RBP30.38■■■□□ 2.45
CNOT3-203ENST00000440571 TNS2Q63HR2 1409 aa30.38■■■□□ 2.45
CNOT3-203ENST00000440571 OVOS2A0A0G2JMS6 1433 aa30.37■■■□□ 2.45
CNOT3-203ENST00000440571 CFAP53Q96M91 514 aa30.36■■■□□ 2.45
CNOT3-203ENST00000440571 IGSF1Q8N6C5 1336 aa30.36■■■□□ 2.45
CNOT3-203ENST00000440571 MEGF6O75095 1541 aa30.34■■■□□ 2.45
CNOT3-203ENST00000440571 RALBP1Q15311 655 aa30.33■■■□□ 2.45
CNOT3-203ENST00000440571 SULT6B1Q6IMI4 303 aa30.33■■■□□ 2.45
CNOT3-203ENST00000440571 EP400Q96L91 3159 aa30.33■■■□□ 2.45
CNOT3-203ENST00000440571 LRRC37A3O60309 1634 aa30.33■■■□□ 2.45
CNOT3-203ENST00000440571 SPG7Q9UQ90 795 aa30.32■■■□□ 2.44
CNOT3-203ENST00000440571 NCAPD2Q15021 1401 aa30.31■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms