RNA–Protein interactions for RNA: ENST00000439681.1

UBR3-205, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 2

Gene UBR3, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-205ENST00000439681 NUTM2EB1AL46 878 aaPredicted RBP10.04□□□□□ -0.8
UBR3-205ENST00000439681 DIAPH1O60610 1272 aaKnown RBP10.04□□□□□ -0.8
UBR3-205ENST00000439681 NUTM2AQ8IVF1 878 aaPredicted RBP10.04□□□□□ -0.8
UBR3-205ENST00000439681 RTL1A6NKG5 1358 aa10.03□□□□□ -0.8
UBR3-205ENST00000439681 CRYBG1Q9Y4K1 1723 aa10.03□□□□□ -0.8
UBR3-205ENST00000439681 PRDM11Q9NQV5 511 aa10.03□□□□□ -0.8
UBR3-205ENST00000439681 PEAK1Q9H792 1746 aa10.03□□□□□ -0.8
UBR3-205ENST00000439681 ADAMTS2O95450 1211 aa10.02□□□□□ -0.8
UBR3-205ENST00000439681 SPATA31A6Q5VVP1 1343 aa10.02□□□□□ -0.8
UBR3-205ENST00000439681 PHRF1Q9P1Y6 1649 aaKnown RBP10.02□□□□□ -0.81
UBR3-205ENST00000439681 FAM9BQ8IZU0 186 aa10.02□□□□□ -0.81
UBR3-205ENST00000439681 ADAMTS8Q9UP79 889 aa10.02□□□□□ -0.81
UBR3-205ENST00000439681 ANKRD24Q8TF21 1146 aa10.01□□□□□ -0.81
UBR3-205ENST00000439681 LTV1Q96GA3 475 aaPredicted RBP10.01□□□□□ -0.81
UBR3-205ENST00000439681 NUDCQ9Y266 331 aa10.01□□□□□ -0.81
UBR3-205ENST00000439681 BLMP54132 1417 aaPredicted RBP10□□□□□ -0.81
UBR3-205ENST00000439681 U2SURPO15042 1029 aaKnown RBP10□□□□□ -0.81
UBR3-205ENST00000439681 EYA1Q99502 592 aa10□□□□□ -0.81
UBR3-205ENST00000439681 SHPRHQ149N8 1683 aa10□□□□□ -0.81
UBR3-205ENST00000439681 U2AF1L5P0DN76 240 aaPredicted RBP9.99□□□□□ -0.81
UBR3-205ENST00000439681 U2AF1Q01081 240 aaKnown RBP eCLIP9.99□□□□□ -0.81
UBR3-205ENST00000439681 WDR43Q15061 677 aaKnown RBP eCLIP9.99□□□□□ -0.81
UBR3-205ENST00000439681 CAMTA1Q9Y6Y1 1673 aa9.99□□□□□ -0.81
UBR3-205ENST00000439681 LRP6O75581 1613 aa9.99□□□□□ -0.81
UBR3-205ENST00000439681 ERBB3P21860 1342 aa9.99□□□□□ -0.81
UBR3-205ENST00000439681 NBPF6Q5VWK0 638 aa9.99□□□□□ -0.81
UBR3-205ENST00000439681 NBPF4Q96M43 638 aa9.99□□□□□ -0.81
UBR3-205ENST00000439681 BTG4Q9NY30 223 aa9.99□□□□□ -0.81
UBR3-205ENST00000439681 MAP2P11137 1827 aaKnown RBP9.99□□□□□ -0.81
UBR3-205ENST00000439681 ABCA3Q99758 1704 aa9.99□□□□□ -0.81
UBR3-205ENST00000439681 COL18A1P39060 1754 aa9.98□□□□□ -0.81
UBR3-205ENST00000439681 IGSF1Q8N6C5 1336 aa9.98□□□□□ -0.81
UBR3-205ENST00000439681 ABCC6O95255 1503 aa9.98□□□□□ -0.81
UBR3-205ENST00000439681 AEBP1Q8IUX7 1158 aa9.98□□□□□ -0.81
UBR3-205ENST00000439681 FCHSD2O94868 740 aa9.97□□□□□ -0.81
UBR3-205ENST00000439681 HMOX1P09601 288 aa9.97□□□□□ -0.81
UBR3-205ENST00000439681 SULT6B1Q6IMI4 303 aa9.97□□□□□ -0.81
UBR3-205ENST00000439681 FNBP4Q8N3X1 1017 aaPredicted RBP9.97□□□□□ -0.81
UBR3-205ENST00000439681 PLEKHF1Q96S99 279 aa9.97□□□□□ -0.81
UBR3-205ENST00000439681 RSPH6AQ9H0K4 717 aa9.97□□□□□ -0.81
UBR3-205ENST00000439681 EVA1CP58658 441 aa9.97□□□□□ -0.81
UBR3-205ENST00000439681 LARP1Q6PKG0 1096 aaKnown RBP9.97□□□□□ -0.81
UBR3-205ENST00000439681 USHBP1Q8N6Y0 703 aa9.97□□□□□ -0.81
UBR3-205ENST00000439681 C8orf37Q96NL8 207 aa9.97□□□□□ -0.81
UBR3-205ENST00000439681 LMO7Q8WWI1 1683 aa9.96□□□□□ -0.81
UBR3-205ENST00000439681 COL5A2P05997 1499 aaPredicted RBP9.96□□□□□ -0.81
UBR3-205ENST00000439681 WDR17Q8IZU2 1322 aa9.96□□□□□ -0.81
UBR3-205ENST00000439681 CSB-PGBD3P0DP91 1061 aa9.96□□□□□ -0.82
UBR3-205ENST00000439681 NGLY1Q96IV0 654 aa9.96□□□□□ -0.82
UBR3-205ENST00000439681 STRN4Q9NRL3 753 aa9.96□□□□□ -0.82
UBR3-205ENST00000439681 NLRP2Q9NX02 1062 aa9.96□□□□□ -0.82
UBR3-205ENST00000439681 LTN1O94822 1766 aa9.95□□□□□ -0.82
UBR3-205ENST00000439681 SLIT2O94813 1529 aa9.95□□□□□ -0.82
UBR3-205ENST00000439681 CCDC146Q8IYE0 955 aa9.95□□□□□ -0.82
UBR3-205ENST00000439681 PHACTR3Q96KR7 559 aa9.95□□□□□ -0.82
UBR3-205ENST00000439681 CARD10Q9BWT7 1032 aa9.95□□□□□ -0.82
UBR3-205ENST00000439681 KDRP35968 1356 aa9.95□□□□□ -0.82
UBR3-205ENST00000439681 NCAPD2Q15021 1401 aa9.94□□□□□ -0.82
UBR3-205ENST00000439681 PRKAR2BP31323 418 aa9.94□□□□□ -0.82
UBR3-205ENST00000439681 MEX3CQ5U5Q3 659 aaKnown RBP9.94□□□□□ -0.82
UBR3-205ENST00000439681 UNC5CLQ8IV45 518 aa9.94□□□□□ -0.82
UBR3-205ENST00000439681 RUNDC1Q96C34 613 aa9.94□□□□□ -0.82
UBR3-205ENST00000439681 BCL9LQ86UU0 1499 aa9.94□□□□□ -0.82
UBR3-205ENST00000439681 COL14A1Q05707 1796 aaKnown RBP9.94□□□□□ -0.82
UBR3-205ENST00000439681 TOM1L2Q6ZVM7 507 aa9.94□□□□□ -0.82
UBR3-205ENST00000439681 RGPD1P0DJD0 1748 aa9.93□□□□□ -0.82
UBR3-205ENST00000439681 SENP3-EIF4A1A0A087X0R7 540 aa9.92□□□□□ -0.82
UBR3-205ENST00000439681 APAF1O14727 1248 aa9.92□□□□□ -0.82
UBR3-205ENST00000439681 PNNQ9H307 717 aaKnown RBP9.92□□□□□ -0.82
UBR3-205ENST00000439681 USP21Q9UK80 565 aa9.92□□□□□ -0.82
UBR3-205ENST00000439681 TCP11L2Q8N4U5 519 aa9.92□□□□□ -0.82
UBR3-205ENST00000439681 CRB1P82279 1406 aa9.92□□□□□ -0.82
UBR3-205ENST00000439681 AFF2P51816 1311 aa9.92□□□□□ -0.82
UBR3-205ENST00000439681 VPS72Q15906 364 aa9.91□□□□□ -0.82
UBR3-205ENST00000439681 ILDR1Q86SU0 546 aaPredicted RBP9.91□□□□□ -0.82
UBR3-205ENST00000439681 SPATA31A5Q5VU36 1347 aa9.91□□□□□ -0.82
UBR3-205ENST00000439681 SPATA31A7Q8IWB4 1347 aa9.91□□□□□ -0.82
UBR3-205ENST00000439681 SPATA31A1Q5TZJ5 1347 aa9.91□□□□□ -0.82
UBR3-205ENST00000439681 TMPOP42166 694 aaKnown RBP9.9□□□□□ -0.82
UBR3-205ENST00000439681 MTHFSDQ2M296 383 aaKnown RBP9.9□□□□□ -0.82
UBR3-205ENST00000439681 YTHDC1Q96MU7 727 aaKnown RBP9.9□□□□□ -0.82
UBR3-205ENST00000439681 USP35Q9P2H5 1018 aa9.9□□□□□ -0.82
UBR3-205ENST00000439681 RGPD5Q99666 1765 aa9.9□□□□□ -0.82
UBR3-205ENST00000439681 HNRNPUQ00839 825 aaKnown RBP eCLIP9.9□□□□□ -0.83
UBR3-205ENST00000439681 RRP7AQ9Y3A4 280 aaKnown RBP9.9□□□□□ -0.83
UBR3-205ENST00000439681 TATP17735 454 aaPredicted RBP9.89□□□□□ -0.83
UBR3-205ENST00000439681 NFE2L2Q16236 605 aa9.89□□□□□ -0.83
UBR3-205ENST00000439681 RAPGEF4Q8WZA2 1011 aa9.89□□□□□ -0.83
UBR3-205ENST00000439681 MAPK8IP3Q9UPT6 1336 aa9.89□□□□□ -0.83
UBR3-205ENST00000439681 IL2RBP14784 551 aa9.88□□□□□ -0.83
UBR3-205ENST00000439681 NCBP3Q53F19 620 aaKnown RBP9.88□□□□□ -0.83
UBR3-205ENST00000439681 THRAP3Q9Y2W1 955 aaKnown RBP9.88□□□□□ -0.83
UBR3-205ENST00000439681 SALL2Q9Y467 1007 aaPredicted RBP9.88□□□□□ -0.83
UBR3-205ENST00000439681 MEGF6O75095 1541 aa9.88□□□□□ -0.83
UBR3-205ENST00000439681 PLCH1Q4KWH8 1693 aa9.88□□□□□ -0.83
UBR3-205ENST00000439681 AMOTQ4VCS5 1084 aa9.88□□□□□ -0.83
UBR3-205ENST00000439681 PLEKHO1Q53GL0 409 aaPredicted RBP9.88□□□□□ -0.83
UBR3-205ENST00000439681 BARGINQ6ZT62 677 aa9.88□□□□□ -0.83
UBR3-205ENST00000439681 QTRT2Q9H974 415 aaKnown RBP9.88□□□□□ -0.83
UBR3-205ENST00000439681 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.88□□□□□ -0.838e-7■□□□□ 10.6
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms