RNA–Protein interactions for RNA: ENST00000439555.2

IRF1-204, Transcript of interferon regulatory factor 1, humanhuman

TSL 5

Gene IRF1, Length 524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-204ENST00000439555 OVOS2Q6IE36 1432 aa16.33■□□□□ 0.2
IRF1-204ENST00000439555 TONSLQ96HA7 1378 aa16.32■□□□□ 0.2
IRF1-204ENST00000439555 BCL11BQ9C0K0 894 aaPredicted RBP16.32■□□□□ 0.2
IRF1-204ENST00000439555 BCL9O00512 1426 aa16.31■□□□□ 0.2
IRF1-204ENST00000439555 CARD11Q9BXL7 1154 aa16.31■□□□□ 0.2
IRF1-204ENST00000439555 AKAP12Q02952 1782 aa16.31■□□□□ 0.2
IRF1-204ENST00000439555 CRB1P82279 1406 aa16.3■□□□□ 0.2
IRF1-204ENST00000439555 PTGER2P43116 358 aa16.3■□□□□ 0.2
IRF1-204ENST00000439555 MYOM1P52179 1685 aa16.3■□□□□ 0.2
IRF1-204ENST00000439555 COL5A2P05997 1499 aaPredicted RBP16.29■□□□□ 0.2
IRF1-204ENST00000439555 WNK3Q9BYP7 1800 aa16.29■□□□□ 0.2
IRF1-204ENST00000439555 NLRP6P59044 892 aa16.29■□□□□ 0.2
IRF1-204ENST00000439555 QRICH2Q9H0J4 1663 aa16.29■□□□□ 0.2
IRF1-204ENST00000439555 C1QTNF8P60827 252 aa16.28■□□□□ 0.2
IRF1-204ENST00000439555 PROM2Q8N271 834 aa16.28■□□□□ 0.2
IRF1-204ENST00000439555 PUS7Q96PZ0 661 aaKnown RBP16.28■□□□□ 0.2
IRF1-204ENST00000439555 SYT17Q9BSW7 474 aa16.28■□□□□ 0.2
IRF1-204ENST00000439555 LRRC37A3O60309 1634 aa16.27■□□□□ 0.2
IRF1-204ENST00000439555 TTC21AQ8NDW8 1320 aa16.27■□□□□ 0.2
IRF1-204ENST00000439555 SLC24A1O60721 1099 aa16.27■□□□□ 0.2
IRF1-204ENST00000439555 DDB1Q16531 1140 aa16.27■□□□□ 0.2
IRF1-204ENST00000439555 ANO8Q9HCE9 1232 aaPredicted RBP16.27■□□□□ 0.2
IRF1-204ENST00000439555 CPSF1Q10570 1443 aaKnown RBP16.27■□□□□ 0.19
IRF1-204ENST00000439555 TTC21BQ7Z4L5 1316 aa16.26■□□□□ 0.19
IRF1-204ENST00000439555 IFFO2Q5TF58 517 aa16.26■□□□□ 0.19
IRF1-204ENST00000439555 CDCA7Q9BWT1 371 aaPredicted RBP16.26■□□□□ 0.19
IRF1-204ENST00000439555 COL18A1P39060 1754 aa16.26■□□□□ 0.19
IRF1-204ENST00000439555 AATKQ6ZMQ8 1374 aa16.26■□□□□ 0.19
IRF1-204ENST00000439555 KCNH5Q8NCM2 988 aa16.25■□□□□ 0.19
IRF1-204ENST00000439555 SENP3-EIF4A1A0A087X0R7 540 aa16.24■□□□□ 0.19
IRF1-204ENST00000439555 PDGFDQ9GZP0 370 aaPredicted RBP16.24■□□□□ 0.19
IRF1-204ENST00000439555 ZBTB7AO95365 584 aa16.23■□□□□ 0.19
IRF1-204ENST00000439555 SLC15A2Q16348 729 aa16.23■□□□□ 0.19
IRF1-204ENST00000439555 SGIP1Q9BQI5 828 aa16.23■□□□□ 0.19
IRF1-204ENST00000439555 FHDC1Q9C0D6 1143 aaPredicted RBP16.23■□□□□ 0.19
IRF1-204ENST00000439555 MTFR1LQ9H019 292 aa16.23■□□□□ 0.19
IRF1-204ENST00000439555 STK32BQ9NY57 414 aa16.22■□□□□ 0.19
IRF1-204ENST00000439555 ATF5Q9Y2D1 282 aaPredicted RBP16.22■□□□□ 0.19
IRF1-204ENST00000439555 SLIT3O75094 1523 aa16.22■□□□□ 0.19
IRF1-204ENST00000439555 KTN1Q86UP2 1357 aaKnown RBP16.22■□□□□ 0.19
IRF1-204ENST00000439555 MAP3K5Q99683 1374 aa16.22■□□□□ 0.19
IRF1-204ENST00000439555 RGPD5Q99666 1765 aa16.21■□□□□ 0.19
IRF1-204ENST00000439555 TXNRD1Q16881 649 aa16.21■□□□□ 0.19
IRF1-204ENST00000439555 ARHGEF25Q86VW2 580 aa16.21■□□□□ 0.19
IRF1-204ENST00000439555 MARCH10Q8NA82 808 aaPredicted RBP16.2■□□□□ 0.18
IRF1-204ENST00000439555 TOM1L2Q6ZVM7 507 aa16.19■□□□□ 0.18
IRF1-204ENST00000439555 PTF1AQ7RTS3 328 aa16.19■□□□□ 0.18
IRF1-204ENST00000439555 TESK2Q96S53 571 aa16.19■□□□□ 0.18
IRF1-204ENST00000439555 TIMELESSQ9UNS1 1208 aa16.19■□□□□ 0.18
IRF1-204ENST00000439555 WDR17Q8IZU2 1322 aa16.19■□□□□ 0.18
IRF1-204ENST00000439555 USP31Q70CQ4 1352 aa16.18■□□□□ 0.18
IRF1-204ENST00000439555 HDGFL2Q7Z4V5 671 aaPredicted RBP16.18■□□□□ 0.18
IRF1-204ENST00000439555 TERF2IPQ9NYB0 399 aa16.18■□□□□ 0.18
IRF1-204ENST00000439555 COL24A1Q17RW2 1714 aa16.18■□□□□ 0.18
IRF1-204ENST00000439555 KAT6BQ8WYB5 2073 aa16.17■□□□□ 0.18
IRF1-204ENST00000439555 TMC1Q8TDI8 760 aa16.17■□□□□ 0.18
IRF1-204ENST00000439555 SLC12A5Q9H2X9 1139 aa16.17■□□□□ 0.18
IRF1-204ENST00000439555 CLSPNQ9HAW4 1339 aa16.17■□□□□ 0.18
IRF1-204ENST00000439555 QSER1Q2KHR3 1735 aa16.16■□□□□ 0.18
IRF1-204ENST00000439555 ST20-MTHFSA0A0A6YYL1 179 aa16.16■□□□□ 0.18
IRF1-204ENST00000439555 ARXQ96QS3 562 aa16.16■□□□□ 0.18
IRF1-204ENST00000439555 AXIN2Q9Y2T1 843 aa16.16■□□□□ 0.18
IRF1-204ENST00000439555 CD163L1Q9NR16 1453 aa16.16■□□□□ 0.18
IRF1-204ENST00000439555 NHSQ6T4R5 1651 aa16.15■□□□□ 0.18
IRF1-204ENST00000439555 EXOC5O00471 708 aa16.15■□□□□ 0.18
IRF1-204ENST00000439555 CARD10Q9BWT7 1032 aa16.15■□□□□ 0.18
IRF1-204ENST00000439555 PIK3C2AO00443 1686 aa16.14■□□□□ 0.18
IRF1-204ENST00000439555 EDC4Q6P2E9 1401 aaKnown RBP16.14■□□□□ 0.17
IRF1-204ENST00000439555 ZBTB7CA1YPR0 619 aa16.14■□□□□ 0.17
IRF1-204ENST00000439555 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.14■□□□□ 0.17
IRF1-204ENST00000439555 PAPPAQ13219 1627 aa16.12■□□□□ 0.17
IRF1-204ENST00000439555 SLC16A10Q8TF71 515 aa16.12■□□□□ 0.17
IRF1-204ENST00000439555 GIGYF1O75420 1035 aaPredicted RBP16.11■□□□□ 0.17
IRF1-204ENST00000439555 NME9Q86XW9 330 aa16.11■□□□□ 0.17
IRF1-204ENST00000439555 A0A1W2PP64 1363 aa16.11■□□□□ 0.17
IRF1-204ENST00000439555 CCDC7Q96M83 1385 aa16.11■□□□□ 0.17
IRF1-204ENST00000439555 CEP350Q5VT06 3117 aa16.1■□□□□ 0.17
IRF1-204ENST00000439555 BTAF1O14981 1849 aa16.1■□□□□ 0.17
IRF1-204ENST00000439555 NFAT5O94916 1531 aa16.1■□□□□ 0.17
IRF1-204ENST00000439555 ABCC6O95255 1503 aa16.1■□□□□ 0.17
IRF1-204ENST00000439555 SOX12O15370 315 aa16.1■□□□□ 0.17
IRF1-204ENST00000439555 GPR162Q16538 588 aa16.1■□□□□ 0.17
IRF1-204ENST00000439555 CSB-PGBD3P0DP91 1061 aa16.09■□□□□ 0.17
IRF1-204ENST00000439555 TMF1P82094 1093 aa16.09■□□□□ 0.17
IRF1-204ENST00000439555 CDCA8Q53HL2 280 aa16.08■□□□□ 0.16
IRF1-204ENST00000439555 USP47Q96K76 1375 aa16.08■□□□□ 0.16
IRF1-204ENST00000439555 GOLGB1Q14789 3259 aaKnown RBP16.07■□□□□ 0.16
IRF1-204ENST00000439555 MON2Q7Z3U7 1717 aa16.07■□□□□ 0.16
IRF1-204ENST00000439555 SHANK3Q9BYB0 1731 aa16.06■□□□□ 0.16
IRF1-204ENST00000439555 TNS2Q63HR2 1409 aa16.06■□□□□ 0.16
IRF1-204ENST00000439555 ERBB3P21860 1342 aa16.06■□□□□ 0.16
IRF1-204ENST00000439555 ANKRD36BQ8N2N9 1353 aa16.05■□□□□ 0.16
IRF1-204ENST00000439555 COG3Q96JB2 828 aa16.04■□□□□ 0.16
IRF1-204ENST00000439555 USP54Q70EL1 1684 aa16.04■□□□□ 0.16
IRF1-204ENST00000439555 GRIN3BO60391 1043 aa16.03■□□□□ 0.16
IRF1-204ENST00000439555 POLD1P28340 1107 aa16.03■□□□□ 0.16
IRF1-204ENST00000439555 IP6K1Q92551 441 aa16.03■□□□□ 0.16
IRF1-204ENST00000439555 AKT1S1Q96B36 256 aa16.03■□□□□ 0.16
IRF1-204ENST00000439555 PCGF6Q9BYE7 350 aa16.03■□□□□ 0.16
IRF1-204ENST00000439555 SLC27A3Q5K4L6 730 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms