RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 COL18A1P39060 1754 aa34.37■■■■□ 3.09
RAPGEF1-206ENST00000438647 ABCC6O95255 1503 aa34.36■■■■□ 3.09
RAPGEF1-206ENST00000438647 BARGINQ6ZT62 677 aa34.36■■■■□ 3.09
RAPGEF1-206ENST00000438647 TCP11L2Q8N4U5 519 aa34.36■■■■□ 3.09
RAPGEF1-206ENST00000438647 COG3Q96JB2 828 aa34.36■■■■□ 3.09
RAPGEF1-206ENST00000438647 THRAP3Q9Y2W1 955 aaKnown RBP34.36■■■■□ 3.09
RAPGEF1-206ENST00000438647 CRB1P82279 1406 aa34.36■■■■□ 3.09
RAPGEF1-206ENST00000438647 THSD7AQ9UPZ6 1657 aa34.35■■■■□ 3.09
RAPGEF1-206ENST00000438647 CCDC125Q86Z20 511 aa34.35■■■■□ 3.09
RAPGEF1-206ENST00000438647 AXIN2Q9Y2T1 843 aa34.34■■■■□ 3.09
RAPGEF1-206ENST00000438647 MYOM1P52179 1685 aa34.31■■■■□ 3.08
RAPGEF1-206ENST00000438647 WDR17Q8IZU2 1322 aa34.31■■■■□ 3.08
RAPGEF1-206ENST00000438647 TOM1L2Q6ZVM7 507 aa34.31■■■■□ 3.08
RAPGEF1-206ENST00000438647 POLR3GLQ9BT43 218 aa34.29■■■■□ 3.08
RAPGEF1-206ENST00000438647 CSB-PGBD3P0DP91 1061 aa34.27■■■■□ 3.08
RAPGEF1-206ENST00000438647 FYB1O15117 783 aa34.26■■■■□ 3.08
RAPGEF1-206ENST00000438647 BLMP54132 1417 aaPredicted RBP34.25■■■■□ 3.07
RAPGEF1-206ENST00000438647 LTN1O94822 1766 aa34.25■■■■□ 3.07
RAPGEF1-206ENST00000438647 NSD3Q9BZ95 1437 aa34.23■■■■□ 3.07
RAPGEF1-206ENST00000438647 RGPD5Q99666 1765 aa34.23■■■■□ 3.07
RAPGEF1-206ENST00000438647 GGNBP2Q9H3C7 697 aa34.22■■■■□ 3.07
RAPGEF1-206ENST00000438647 PDE3BQ13370 1112 aa34.21■■■■□ 3.07
RAPGEF1-206ENST00000438647 SF3B2Q13435 895 aaKnown RBP34.21■■■■□ 3.07
RAPGEF1-206ENST00000438647 CARD10Q9BWT7 1032 aa34.21■■■■□ 3.07
RAPGEF1-206ENST00000438647 CARD14Q9BXL6 1004 aa34.21■■■■□ 3.07
RAPGEF1-206ENST00000438647 ERBB3P21860 1342 aa34.19■■■■□ 3.06
RAPGEF1-206ENST00000438647 CDCA7Q9BWT1 371 aaPredicted RBP34.18■■■■□ 3.06
RAPGEF1-206ENST00000438647 KIF20BQ96Q89 1820 aa34.18■■■■□ 3.06
RAPGEF1-206ENST00000438647 IP6K1Q92551 441 aa34.17■■■■□ 3.06
RAPGEF1-206ENST00000438647 CCDC7Q96M83 1385 aa34.17■■■■□ 3.06
RAPGEF1-206ENST00000438647 PARP4Q9UKK3 1724 aaKnown RBP34.16■■■■□ 3.06
RAPGEF1-206ENST00000438647 CGNL1Q0VF96 1302 aa34.15■■■■□ 3.06
RAPGEF1-206ENST00000438647 MAP3K19Q56UN5 1328 aa34.15■■■■□ 3.06
RAPGEF1-206ENST00000438647 FAM196AQ6ZSG2 479 aa34.15■■■■□ 3.06
RAPGEF1-206ENST00000438647 FAM182BQ5T319 152 aa34.14■■■■□ 3.06
RAPGEF1-206ENST00000438647 ANKRD24Q8TF21 1146 aa34.14■■■■□ 3.06
RAPGEF1-206ENST00000438647 AMPHP49418 695 aa34.13■■■■□ 3.05
RAPGEF1-206ENST00000438647 DDB1Q16531 1140 aa34.11■■■■□ 3.05
RAPGEF1-206ENST00000438647 NLRP2Q9NX02 1062 aa34.11■■■■□ 3.05
RAPGEF1-206ENST00000438647 RTL1A6NKG5 1358 aa34.11■■■■□ 3.05
RAPGEF1-206ENST00000438647 C11orf95C9JLR9 678 aaPredicted RBP34.09■■■■□ 3.05
RAPGEF1-206ENST00000438647 HOXC9P31274 260 aa34.09■■■■□ 3.05
RAPGEF1-206ENST00000438647 FBLN1P23142 703 aa34.08■■■■□ 3.05
RAPGEF1-206ENST00000438647 WNK3Q9BYP7 1800 aa34.07■■■■□ 3.04
RAPGEF1-206ENST00000438647 RRS1Q15050 365 aaKnown RBP34.07■■■■□ 3.04
RAPGEF1-206ENST00000438647 PANK3Q9H999 370 aa34.07■■■■□ 3.04
RAPGEF1-206ENST00000438647 DISP2A7MBM2 1401 aa34.06■■■■□ 3.04
RAPGEF1-206ENST00000438647 LRRC37A3O60309 1634 aa34.05■■■■□ 3.04
RAPGEF1-206ENST00000438647 BAG6P46379 1132 aa34.05■■■■□ 3.04
RAPGEF1-206ENST00000438647 RGPD1P0DJD0 1748 aa34.04■■■■□ 3.04
RAPGEF1-206ENST00000438647 KIF24Q5T7B8 1368 aa34.03■■■■□ 3.04
RAPGEF1-206ENST00000438647 LTV1Q96GA3 475 aaPredicted RBP34.03■■■■□ 3.04
RAPGEF1-206ENST00000438647 KIF7Q2M1P5 1343 aa34.03■■■■□ 3.04
RAPGEF1-206ENST00000438647 FAM208AQ9UK61 1670 aaKnown RBP34.03■■■■□ 3.04
RAPGEF1-206ENST00000438647 DEFB132Q7Z7B7 95 aa34.02■■■■□ 3.04
RAPGEF1-206ENST00000438647 OVOS2A0A0G2JMS6 1433 aa34.02■■■■□ 3.04
RAPGEF1-206ENST00000438647 EXOC5O00471 708 aa34■■■■□ 3.03
RAPGEF1-206ENST00000438647 FLT4P35916 1363 aa33.99■■■■□ 3.03
RAPGEF1-206ENST00000438647 TRIM37O94972 964 aa33.99■■■■□ 3.03
RAPGEF1-206ENST00000438647 IL2RBP14784 551 aa33.99■■■■□ 3.03
RAPGEF1-206ENST00000438647 SMG6Q86US8 1419 aaKnown RBP33.98■■■■□ 3.03
RAPGEF1-206ENST00000438647 NSD2O96028 1365 aa33.97■■■■□ 3.03
RAPGEF1-206ENST00000438647 TNS2Q63HR2 1409 aa33.96■■■■□ 3.03
RAPGEF1-206ENST00000438647 INSRP06213 1382 aa33.95■■■■□ 3.02
RAPGEF1-206ENST00000438647 KNSTRNQ9Y448 316 aa33.94■■■■□ 3.02
RAPGEF1-206ENST00000438647 TNS1Q9HBL0 1735 aaKnown RBP33.93■■■■□ 3.02
RAPGEF1-206ENST00000438647 ANKRD26Q9UPS8 1709 aa33.93■■■■□ 3.02
RAPGEF1-206ENST00000438647 MARCH10Q8NA82 808 aaPredicted RBP33.92■■■■□ 3.02
RAPGEF1-206ENST00000438647 EMILIN1Q9Y6C2 1016 aa33.92■■■■□ 3.02
RAPGEF1-206ENST00000438647 PEAK1Q9H792 1746 aa33.92■■■■□ 3.02
RAPGEF1-206ENST00000438647 HSP90AB2PQ58FF8 381 aa33.91■■■■□ 3.02
RAPGEF1-206ENST00000438647 BCL9O00512 1426 aa33.9■■■■□ 3.02
RAPGEF1-206ENST00000438647 APBA3O96018 575 aa33.89■■■■□ 3.02
RAPGEF1-206ENST00000438647 EN1Q05925 392 aaPredicted RBP33.89■■■■□ 3.02
RAPGEF1-206ENST00000438647 PPM1GO15355 546 aaPredicted RBP33.88■■■■□ 3.01
RAPGEF1-206ENST00000438647 PARD3Q8TEW0 1356 aa33.85■■■■□ 3.01
RAPGEF1-206ENST00000438647 WASHC2AQ641Q2 1341 aa33.84■■■■□ 3.01
RAPGEF1-206ENST00000438647 TNNT2P45379 298 aaPredicted RBP33.84■■■■□ 3.01
RAPGEF1-206ENST00000438647 NBPF6Q5VWK0 638 aa33.84■■■■□ 3.01
RAPGEF1-206ENST00000438647 NBPF4Q96M43 638 aa33.84■■■■□ 3.01
RAPGEF1-206ENST00000438647 POLKQ9UBT6 870 aa33.84■■■■□ 3.01
RAPGEF1-206ENST00000438647 MAP2P11137 1827 aaKnown RBP33.83■■■■□ 3.01
RAPGEF1-206ENST00000438647 MORC1Q86VD1 984 aa33.82■■■■□ 3
RAPGEF1-206ENST00000438647 RGPD2P0DJD1 1756 aa33.81■■■■□ 3
RAPGEF1-206ENST00000438647 BCL11BQ9C0K0 894 aaPredicted RBP33.81■■■■□ 3
RAPGEF1-206ENST00000438647 EZH2Q15910 746 aaKnown RBP33.8■■■■□ 3
RAPGEF1-206ENST00000438647 CAMKK2Q96RR4 588 aa33.8■■■■□ 3
RAPGEF1-206ENST00000438647 SBF2Q86WG5 1849 aa33.8■■■■□ 3
RAPGEF1-206ENST00000438647 RAPGEF4Q8WZA2 1011 aa33.79■■■■□ 3
RAPGEF1-206ENST00000438647 AMER1Q5JTC6 1135 aaPredicted RBP33.78■■■■□ 3
RAPGEF1-206ENST00000438647 USHBP1Q8N6Y0 703 aa33.77■■■■□ 3
RAPGEF1-206ENST00000438647 MEGF6O75095 1541 aa33.75■■■□□ 2.99
RAPGEF1-206ENST00000438647 ZCRB1Q8TBF4 217 aaKnown RBP33.74■■■□□ 2.99
RAPGEF1-206ENST00000438647 PER1O15534 1290 aaPredicted RBP33.73■■■□□ 2.99
RAPGEF1-206ENST00000438647 TATP17735 454 aaPredicted RBP33.73■■■□□ 2.99
RAPGEF1-206ENST00000438647 DDX54Q8TDD1 881 aaKnown RBP33.73■■■□□ 2.99
RAPGEF1-206ENST00000438647 PLSCR1O15162 318 aa33.72■■■□□ 2.99
RAPGEF1-206ENST00000438647 NCAPD2Q15021 1401 aa33.68■■■□□ 2.98
RAPGEF1-206ENST00000438647 RGPD3A6NKT7 1758 aaPredicted RBP33.67■■■□□ 2.98
RAPGEF1-206ENST00000438647 RGPD4Q7Z3J3 1758 aa33.67■■■□□ 2.98
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms