RNA–Protein interactions for RNA: ENST00000437944.5

SCRN3-206, Transcript of secernin 3, humanhuman

TSL 2

Gene SCRN3, Length 1,141 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN3-206ENST00000437944 SMG6Q86US8 1419 aaKnown RBP16.81■□□□□ 0.28
SCRN3-206ENST00000437944 GCP02774 474 aa16.81■□□□□ 0.28
SCRN3-206ENST00000437944 LTN1O94822 1766 aa16.81■□□□□ 0.28
SCRN3-206ENST00000437944 CCER2I3L3R5 266 aa16.8■□□□□ 0.28
SCRN3-206ENST00000437944 POLKQ9UBT6 870 aa16.79■□□□□ 0.28
SCRN3-206ENST00000437944 FBLN1P23142 703 aa16.78■□□□□ 0.28
SCRN3-206ENST00000437944 HSPA1LP34931 641 aa16.78■□□□□ 0.28
SCRN3-206ENST00000437944 MTHFSP49914 203 aa16.78■□□□□ 0.28
SCRN3-206ENST00000437944 CABLES1Q8TDN4 633 aa16.78■□□□□ 0.28
SCRN3-206ENST00000437944 KIF24Q5T7B8 1368 aa16.77■□□□□ 0.28
SCRN3-206ENST00000437944 JCADQ9P266 1359 aa16.77■□□□□ 0.28
SCRN3-206ENST00000437944 SOX12O15370 315 aa16.77■□□□□ 0.28
SCRN3-206ENST00000437944 CPDO75976 1380 aa16.77■□□□□ 0.27
SCRN3-206ENST00000437944 PEAK1Q9H792 1746 aa16.76■□□□□ 0.27
SCRN3-206ENST00000437944 MAP3K19Q56UN5 1328 aa16.76■□□□□ 0.27
SCRN3-206ENST00000437944 CDK12Q9NYV4 1490 aaPredicted RBP16.76■□□□□ 0.27
SCRN3-206ENST00000437944 RRS1Q15050 365 aaKnown RBP16.76■□□□□ 0.27
SCRN3-206ENST00000437944 ARHGEF25Q86VW2 580 aa16.76■□□□□ 0.27
SCRN3-206ENST00000437944 INSRP06213 1382 aa16.76■□□□□ 0.27
SCRN3-206ENST00000437944 PLEKHG5O94827 1062 aa16.75■□□□□ 0.27
SCRN3-206ENST00000437944 EMILIN1Q9Y6C2 1016 aa16.75■□□□□ 0.27
SCRN3-206ENST00000437944 RTL1A6NKG5 1358 aa16.75■□□□□ 0.27
SCRN3-206ENST00000437944 COL18A1P39060 1754 aa16.74■□□□□ 0.27
SCRN3-206ENST00000437944 CCDC184Q52MB2 194 aa16.74■□□□□ 0.27
SCRN3-206ENST00000437944 ABCC6O95255 1503 aa16.74■□□□□ 0.27
SCRN3-206ENST00000437944 HAP1P54257 671 aaPredicted RBP16.73■□□□□ 0.27
SCRN3-206ENST00000437944 CFAP53Q96M91 514 aa16.73■□□□□ 0.27
SCRN3-206ENST00000437944 FLT4P35916 1363 aa16.73■□□□□ 0.27
SCRN3-206ENST00000437944 COL3A1P02461 1466 aaPredicted RBP16.73■□□□□ 0.27
SCRN3-206ENST00000437944 AMPHP49418 695 aa16.72■□□□□ 0.27
SCRN3-206ENST00000437944 ZC3H6P61129 1189 aaKnown RBP16.72■□□□□ 0.27
SCRN3-206ENST00000437944 IP6K1Q92551 441 aa16.72■□□□□ 0.27
SCRN3-206ENST00000437944 MRS2Q9HD23 443 aa16.72■□□□□ 0.27
SCRN3-206ENST00000437944 SSUH2Q9Y2M2 353 aa16.72■□□□□ 0.27
SCRN3-206ENST00000437944 RGPD5Q99666 1765 aa16.72■□□□□ 0.27
SCRN3-206ENST00000437944 SPATA31A6Q5VVP1 1343 aa16.71■□□□□ 0.27
SCRN3-206ENST00000437944 SPDYE2BA6NHP3 402 aa16.71■□□□□ 0.27
SCRN3-206ENST00000437944 PPM1GO15355 546 aaPredicted RBP16.71■□□□□ 0.27
SCRN3-206ENST00000437944 SPDYE6P0CI01 402 aa16.71■□□□□ 0.27
SCRN3-206ENST00000437944 HOXC9P31274 260 aa16.71■□□□□ 0.27
SCRN3-206ENST00000437944 SPDYE2Q495Y8 402 aa16.71■□□□□ 0.27
SCRN3-206ENST00000437944 KIAA0232Q92628 1395 aa16.71■□□□□ 0.27
SCRN3-206ENST00000437944 COL14A1Q05707 1796 aaKnown RBP16.69■□□□□ 0.26
SCRN3-206ENST00000437944 LMO7Q8WWI1 1683 aa16.69■□□□□ 0.26
SCRN3-206ENST00000437944 BLMP54132 1417 aaPredicted RBP16.69■□□□□ 0.26
SCRN3-206ENST00000437944 HSP90AB2PQ58FF8 381 aa16.68■□□□□ 0.26
SCRN3-206ENST00000437944 PRDM11Q9NQV5 511 aa16.68■□□□□ 0.26
SCRN3-206ENST00000437944 ZBTB7CA1YPR0 619 aa16.67■□□□□ 0.26
SCRN3-206ENST00000437944 DIAPH1O60610 1272 aaKnown RBP16.67■□□□□ 0.26
SCRN3-206ENST00000437944 PNISRQ8TF01 805 aaKnown RBP16.67■□□□□ 0.26
SCRN3-206ENST00000437944 FAM83GA6ND36 823 aa16.65■□□□□ 0.26
SCRN3-206ENST00000437944 NUTM2BA6NNL0 878 aaPredicted RBP16.65■□□□□ 0.26
SCRN3-206ENST00000437944 NUTM2EB1AL46 878 aaPredicted RBP16.65■□□□□ 0.26
SCRN3-206ENST00000437944 IL13P35225 146 aa16.65■□□□□ 0.26
SCRN3-206ENST00000437944 CHRNA2Q15822 529 aa16.65■□□□□ 0.26
SCRN3-206ENST00000437944 NUTM2AQ8IVF1 878 aaPredicted RBP16.65■□□□□ 0.26
SCRN3-206ENST00000437944 NUDCQ9Y266 331 aa16.65■□□□□ 0.26
SCRN3-206ENST00000437944 AXIN2Q9Y2T1 843 aa16.65■□□□□ 0.26
SCRN3-206ENST00000437944 CAMTA1Q9Y6Y1 1673 aa16.65■□□□□ 0.26
SCRN3-206ENST00000437944 RGPD1P0DJD0 1748 aa16.65■□□□□ 0.26
SCRN3-206ENST00000437944 LRP6O75581 1613 aa16.64■□□□□ 0.25
SCRN3-206ENST00000437944 EIF4A2Q14240 407 aaKnown RBP16.64■□□□□ 0.25
SCRN3-206ENST00000437944 PLCH1Q4KWH8 1693 aa16.64■□□□□ 0.25
SCRN3-206ENST00000437944 FAM208AQ9UK61 1670 aaKnown RBP16.64■□□□□ 0.25
SCRN3-206ENST00000437944 NWD2Q9ULI1 1742 aa16.64■□□□□ 0.25
SCRN3-206ENST00000437944 ADAMTS2O95450 1211 aa16.63■□□□□ 0.25
SCRN3-206ENST00000437944 RGPD2P0DJD1 1756 aa16.62■□□□□ 0.25
SCRN3-206ENST00000437944 WDR43Q15061 677 aaKnown RBP eCLIP16.62■□□□□ 0.25
SCRN3-206ENST00000437944 ANKRD24Q8TF21 1146 aa16.61■□□□□ 0.25
SCRN3-206ENST00000437944 ERBB3P21860 1342 aa16.61■□□□□ 0.25
SCRN3-206ENST00000437944 COL5A2P05997 1499 aaPredicted RBP16.61■□□□□ 0.25
SCRN3-206ENST00000437944 NRAPQ86VF7 1730 aa16.6■□□□□ 0.25
SCRN3-206ENST00000437944 LTV1Q96GA3 475 aaPredicted RBP16.6■□□□□ 0.25
SCRN3-206ENST00000437944 SLIT2O94813 1529 aa16.6■□□□□ 0.25
SCRN3-206ENST00000437944 U2SURPO15042 1029 aaKnown RBP16.59■□□□□ 0.25
SCRN3-206ENST00000437944 ADAMTS8Q9UP79 889 aa16.59■□□□□ 0.25
SCRN3-206ENST00000437944 IGSF1Q8N6C5 1336 aa16.59■□□□□ 0.25
SCRN3-206ENST00000437944 U2AF1L5P0DN76 240 aaPredicted RBP16.58■□□□□ 0.24
SCRN3-206ENST00000437944 U2AF1Q01081 240 aaKnown RBP eCLIP16.58■□□□□ 0.24
SCRN3-206ENST00000437944 FAM9BQ8IZU0 186 aa16.58■□□□□ 0.24
SCRN3-206ENST00000437944 EYA1Q99502 592 aa16.58■□□□□ 0.24
SCRN3-206ENST00000437944 BTG4Q9NY30 223 aa16.58■□□□□ 0.24
SCRN3-206ENST00000437944 NCAPD2Q15021 1401 aa16.57■□□□□ 0.24
SCRN3-206ENST00000437944 WDR17Q8IZU2 1322 aa16.57■□□□□ 0.24
SCRN3-206ENST00000437944 FBXO3Q9UK99 471 aa16.57■□□□□ 0.24
SCRN3-206ENST00000437944 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.56■□□□□ 0.24
SCRN3-206ENST00000437944 EVA1CP58658 441 aa16.56■□□□□ 0.24
SCRN3-206ENST00000437944 NBPF6Q5VWK0 638 aa16.56■□□□□ 0.24
SCRN3-206ENST00000437944 FNBP4Q8N3X1 1017 aaPredicted RBP16.56■□□□□ 0.24
SCRN3-206ENST00000437944 NBPF4Q96M43 638 aa16.56■□□□□ 0.24
SCRN3-206ENST00000437944 KDRP35968 1356 aa16.55■□□□□ 0.24
SCRN3-206ENST00000437944 FCHSD2O94868 740 aa16.55■□□□□ 0.24
SCRN3-206ENST00000437944 CSB-PGBD3P0DP91 1061 aa16.55■□□□□ 0.24
SCRN3-206ENST00000437944 MEX3CQ5U5Q3 659 aaKnown RBP16.55■□□□□ 0.24
SCRN3-206ENST00000437944 ILDR2Q71H61 639 aa16.55■□□□□ 0.24
SCRN3-206ENST00000437944 NGLY1Q96IV0 654 aa16.55■□□□□ 0.24
SCRN3-206ENST00000437944 C8orf37Q96NL8 207 aa16.55■□□□□ 0.24
SCRN3-206ENST00000437944 SULT6B1Q6IMI4 303 aa16.54■□□□□ 0.24
SCRN3-206ENST00000437944 PNNQ9H307 717 aaKnown RBP16.54■□□□□ 0.24
SCRN3-206ENST00000437944 STRN4Q9NRL3 753 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms