RNA–Protein interactions for RNA: ENST00000437863.2

PTPN20-210, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 5

Gene PTPN20, Length 3,125 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-210ENST00000437863 ABCC11Q96J66 1382 aa9.15□□□□□ -0.94
PTPN20-210ENST00000437863 TRIM6-TRIM34B2RNG4 842 aa9.15□□□□□ -0.94
PTPN20-210ENST00000437863 TRIM34Q9BYJ4 488 aa9.15□□□□□ -0.94
PTPN20-210ENST00000437863 NRKQ7Z2Y5 1582 aa9.15□□□□□ -0.94
PTPN20-210ENST00000437863 BLMP54132 1417 aaPredicted RBP9.15□□□□□ -0.94
PTPN20-210ENST00000437863 YTHDC2Q9H6S0 1430 aaKnown RBP9.15□□□□□ -0.94
PTPN20-210ENST00000437863 GGT6Q6P531 493 aa9.15□□□□□ -0.95
PTPN20-210ENST00000437863 ZNF710Q8N1W2 664 aa9.15□□□□□ -0.95
PTPN20-210ENST00000437863 TRERF1Q96PN7 1200 aa9.15□□□□□ -0.95
PTPN20-210ENST00000437863 PPP1R9BQ96SB3 815 aa9.15□□□□□ -0.95
PTPN20-210ENST00000437863 CEP170BQ9Y4F5 1589 aaPredicted RBP9.15□□□□□ -0.95
PTPN20-210ENST00000437863 PLEKHG1Q9ULL1 1385 aa9.14□□□□□ -0.95
PTPN20-210ENST00000437863 MYBBP1AQ9BQG0 1328 aaKnown RBP9.14□□□□□ -0.95
PTPN20-210ENST00000437863 SHPRHQ149N8 1683 aa9.14□□□□□ -0.95
PTPN20-210ENST00000437863 ATP7BP35670 1465 aa9.14□□□□□ -0.95
PTPN20-210ENST00000437863 DDX11L8A8MPP1 907 aa9.14□□□□□ -0.95
PTPN20-210ENST00000437863 IDI1Q13907 227 aa9.14□□□□□ -0.95
PTPN20-210ENST00000437863 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.14□□□□□ -0.95
PTPN20-210ENST00000437863 DNAJC2Q99543 621 aaKnown RBP9.14□□□□□ -0.95
PTPN20-210ENST00000437863 CHMP5Q9NZZ3 219 aa9.14□□□□□ -0.95
PTPN20-210ENST00000437863 SETD1BQ9UPS6 1966 aaKnown RBP9.14□□□□□ -0.95
PTPN20-210ENST00000437863 CHD2O14647 1828 aaKnown RBP9.13□□□□□ -0.95
PTPN20-210ENST00000437863 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.13□□□□□ -0.95
PTPN20-210ENST00000437863 NWD1Q149M9 1564 aa9.13□□□□□ -0.95
PTPN20-210ENST00000437863 PIK3R4Q99570 1358 aa9.13□□□□□ -0.95
PTPN20-210ENST00000437863 ZNF500O60304 480 aaPredicted RBP9.13□□□□□ -0.95
PTPN20-210ENST00000437863 NOL7Q9UMY1 257 aaKnown RBP9.13□□□□□ -0.95
PTPN20-210ENST00000437863 KDM2AQ9Y2K7 1162 aa9.13□□□□□ -0.95
PTPN20-210ENST00000437863 PTCH1Q13635 1447 aa9.13□□□□□ -0.95
PTPN20-210ENST00000437863 NALCNQ8IZF0 1738 aa9.13□□□□□ -0.95
PTPN20-210ENST00000437863 PATL2C9JE40 543 aaKnown RBP9.12□□□□□ -0.95
PTPN20-210ENST00000437863 MLECQ14165 292 aa9.12□□□□□ -0.95
PTPN20-210ENST00000437863 HDGFP51858 240 aaKnown RBP9.12□□□□□ -0.95
PTPN20-210ENST00000437863 RGL3Q3MIN7 710 aa9.12□□□□□ -0.95
PTPN20-210ENST00000437863 TMEM2Q9UHN6 1383 aa9.12□□□□□ -0.95
PTPN20-210ENST00000437863 U2AF2P26368 475 aaKnown RBP eCLIP9.11□□□□□ -0.95
PTPN20-210ENST00000437863 CSPP1Q1MSJ5 1256 aa9.11□□□□□ -0.95
PTPN20-210ENST00000437863 UPF2Q9HAU5 1272 aaKnown RBP9.11□□□□□ -0.95
PTPN20-210ENST00000437863 SOX12O15370 315 aa9.11□□□□□ -0.95
PTPN20-210ENST00000437863 PRR29P0C7W0 189 aa9.11□□□□□ -0.95
PTPN20-210ENST00000437863 BCCIPQ9P287 314 aaKnown RBP eCLIP9.11□□□□□ -0.95
PTPN20-210ENST00000437863 ATAD2Q6PL18 1390 aa9.1□□□□□ -0.95
PTPN20-210ENST00000437863 EP400NLQ6ZTU2 488 aa9.1□□□□□ -0.95
PTPN20-210ENST00000437863 ANKRD36BQ8N2N9 1353 aa9.09□□□□□ -0.95
PTPN20-210ENST00000437863 ADAMTS13Q76LX8 1427 aa9.09□□□□□ -0.95
PTPN20-210ENST00000437863 FMN2Q9NZ56 1722 aa9.09□□□□□ -0.95
PTPN20-210ENST00000437863 CFAP70Q5T0N1 1121 aa9.09□□□□□ -0.95
PTPN20-210ENST00000437863 DNAJC5Q9H3Z4 198 aa9.09□□□□□ -0.95
PTPN20-210ENST00000437863 ZKSCAN5Q9Y2L8 839 aa9.09□□□□□ -0.95
PTPN20-210ENST00000437863 TULP1O00294 542 aaPredicted RBP9.09□□□□□ -0.95
PTPN20-210ENST00000437863 PDCL2Q8N4E4 241 aa9.09□□□□□ -0.95
PTPN20-210ENST00000437863 MPNDQ8N594 471 aa9.09□□□□□ -0.95
PTPN20-210ENST00000437863 MYRIPQ8NFW9 859 aa9.09□□□□□ -0.95
PTPN20-210ENST00000437863 ERICH4A6NGS2 130 aa9.08□□□□□ -0.96
PTPN20-210ENST00000437863 CAPN2P17655 700 aa9.08□□□□□ -0.96
PTPN20-210ENST00000437863 NLRP13Q86W25 1043 aa9.08□□□□□ -0.96
PTPN20-210ENST00000437863 LOC102724159A0A0B4J2E5 919 aa9.08□□□□□ -0.96
PTPN20-210ENST00000437863 PWP2Q15269 919 aaKnown RBP9.08□□□□□ -0.96
PTPN20-210ENST00000437863 TNPO1Q92973 898 aaKnown RBP9.08□□□□□ -0.96
PTPN20-210ENST00000437863 CD163L1Q9NR16 1453 aa9.08□□□□□ -0.96
PTPN20-210ENST00000437863 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.07□□□□□ -0.96
PTPN20-210ENST00000437863 FAM193AP78312 1265 aa9.07□□□□□ -0.96
PTPN20-210ENST00000437863 TIGD1Q96MW7 591 aa9.07□□□□□ -0.96
PTPN20-210ENST00000437863 PSEN1P49768 467 aa9.07□□□□□ -0.96
PTPN20-210ENST00000437863 TMED8Q6PL24 325 aaPredicted RBP9.07□□□□□ -0.96
PTPN20-210ENST00000437863 TBC1D32Q96NH3 1257 aa9.07□□□□□ -0.96
PTPN20-210ENST00000437863 FOXD4L1Q9NU39 408 aa9.07□□□□□ -0.96
PTPN20-210ENST00000437863 EVC2Q86UK5 1308 aa9.07□□□□□ -0.96
PTPN20-210ENST00000437863 CLGNO14967 610 aa9.06□□□□□ -0.96
PTPN20-210ENST00000437863 POLR3AO14802 1390 aaPredicted RBP9.06□□□□□ -0.96
PTPN20-210ENST00000437863 SLC20A2Q08357 652 aa9.06□□□□□ -0.96
PTPN20-210ENST00000437863 TMX1Q9H3N1 280 aa9.05□□□□□ -0.96
PTPN20-210ENST00000437863 IGHDP01880 384 aa9.05□□□□□ -0.96
PTPN20-210ENST00000437863 TNNT3P45378 269 aaPredicted RBP9.05□□□□□ -0.96
PTPN20-210ENST00000437863 BCL2L12Q9HB09 334 aa9.05□□□□□ -0.96
PTPN20-210ENST00000437863 KIF3AQ9Y496 699 aa9.05□□□□□ -0.96
PTPN20-210ENST00000437863 DDX49Q9Y6V7 483 aaKnown RBP9.05□□□□□ -0.96
PTPN20-210ENST00000437863 PHRF1Q9P1Y6 1649 aaKnown RBP9.05□□□□□ -0.96
PTPN20-210ENST00000437863 PTMAP06454 111 aaKnown RBP9.05□□□□□ -0.96
PTPN20-210ENST00000437863 MMP14P50281 582 aa9.05□□□□□ -0.96
PTPN20-210ENST00000437863 PDE3BQ13370 1112 aa9.05□□□□□ -0.96
PTPN20-210ENST00000437863 HS1BP3Q53T59 392 aa9.05□□□□□ -0.96
PTPN20-210ENST00000437863 GBP4Q96PP9 640 aa9.05□□□□□ -0.96
PTPN20-210ENST00000437863 CPSF1Q10570 1443 aaKnown RBP9.04□□□□□ -0.96
PTPN20-210ENST00000437863 CCDC66A2RUB6 948 aa9.04□□□□□ -0.96
PTPN20-210ENST00000437863 SKOR2Q2VWA4 1001 aaPredicted RBP9.04□□□□□ -0.96
PTPN20-210ENST00000437863 ANKARQ7Z5J8 1434 aa9.04□□□□□ -0.96
PTPN20-210ENST00000437863 RBSNQ9H1K0 784 aa9.03□□□□□ -0.96
PTPN20-210ENST00000437863 C17orf53Q8N3J3 647 aaPredicted RBP9.03□□□□□ -0.96
PTPN20-210ENST00000437863 COL3A1P02461 1466 aaPredicted RBP9.03□□□□□ -0.96
PTPN20-210ENST00000437863 MFAP1P55081 439 aaKnown RBP9.02□□□□□ -0.96
PTPN20-210ENST00000437863 HSCBQ8IWL3 235 aa9.02□□□□□ -0.96
PTPN20-210ENST00000437863 MARF1Q9Y4F3 1742 aaKnown RBP9.02□□□□□ -0.97
PTPN20-210ENST00000437863 CGNL1Q0VF96 1302 aa9.02□□□□□ -0.97
PTPN20-210ENST00000437863 KIAA2012Q0VF49 1180 aa9.02□□□□□ -0.97
PTPN20-210ENST00000437863 FBXO31Q5XUX0 539 aaPredicted RBP9.02□□□□□ -0.97
PTPN20-210ENST00000437863 CC2D1BQ5T0F9 858 aaKnown RBP9.02□□□□□ -0.97
PTPN20-210ENST00000437863 CAVIN1Q6NZI2 390 aaKnown RBP9.02□□□□□ -0.97
PTPN20-210ENST00000437863 ZNF692Q9BU19 519 aaPredicted RBP9.02□□□□□ -0.97
PTPN20-210ENST00000437863 IQSEC2Q5JU85 1478 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms