RNA–Protein interactions for RNA: ENST00000437613.1

LSG1-203, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 5

Gene LSG1, Length 854 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-203ENST00000437613 ATRNO75882 1429 aa12.96□□□□□ -0.33
LSG1-203ENST00000437613 ZNF316A6NFI3 1004 aaPredicted RBP12.96□□□□□ -0.33
LSG1-203ENST00000437613 CSB-PGBD3P0DP91 1061 aa12.96□□□□□ -0.33
LSG1-203ENST00000437613 CC2D1BQ5T0F9 858 aaKnown RBP12.96□□□□□ -0.33
LSG1-203ENST00000437613 LARP1Q6PKG0 1096 aaKnown RBP12.96□□□□□ -0.33
LSG1-203ENST00000437613 USP54Q70EL1 1684 aa12.96□□□□□ -0.34
LSG1-203ENST00000437613 CAMTA1Q9Y6Y1 1673 aa12.96□□□□□ -0.34
LSG1-203ENST00000437613 PPM1GO15355 546 aaPredicted RBP12.95□□□□□ -0.34
LSG1-203ENST00000437613 ILDR2Q71H61 639 aa12.95□□□□□ -0.34
LSG1-203ENST00000437613 SPATA31A5Q5VU36 1347 aa12.94□□□□□ -0.34
LSG1-203ENST00000437613 SPATA31A7Q8IWB4 1347 aa12.94□□□□□ -0.34
LSG1-203ENST00000437613 HOXC9P31274 260 aa12.94□□□□□ -0.34
LSG1-203ENST00000437613 TOM1L2Q6ZVM7 507 aa12.94□□□□□ -0.34
LSG1-203ENST00000437613 USP35Q9P2H5 1018 aa12.94□□□□□ -0.34
LSG1-203ENST00000437613 KIF20BQ96Q89 1820 aa12.94□□□□□ -0.34
LSG1-203ENST00000437613 NWD2Q9ULI1 1742 aa12.93□□□□□ -0.34
LSG1-203ENST00000437613 PLCH1Q4KWH8 1693 aa12.93□□□□□ -0.34
LSG1-203ENST00000437613 ANKRD24Q8TF21 1146 aa12.93□□□□□ -0.34
LSG1-203ENST00000437613 LTV1Q96GA3 475 aaPredicted RBP12.93□□□□□ -0.34
LSG1-203ENST00000437613 POLKQ9UBT6 870 aa12.93□□□□□ -0.34
LSG1-203ENST00000437613 EMILIN1Q9Y6C2 1016 aa12.93□□□□□ -0.34
LSG1-203ENST00000437613 SPATA31A1Q5TZJ5 1347 aa12.92□□□□□ -0.34
LSG1-203ENST00000437613 WDR17Q8IZU2 1322 aa12.92□□□□□ -0.34
LSG1-203ENST00000437613 COL5A2P05997 1499 aaPredicted RBP12.92□□□□□ -0.34
LSG1-203ENST00000437613 FAM98CQ17RN3 349 aaKnown RBP12.92□□□□□ -0.34
LSG1-203ENST00000437613 HSP90AB2PQ58FF8 381 aa12.92□□□□□ -0.34
LSG1-203ENST00000437613 NPC1L1Q9UHC9 1359 aa12.92□□□□□ -0.34
LSG1-203ENST00000437613 ONECUT3O60422 494 aaPredicted RBP12.91□□□□□ -0.34
LSG1-203ENST00000437613 TCP11L2Q8N4U5 519 aa12.91□□□□□ -0.34
LSG1-203ENST00000437613 CARD10Q9BWT7 1032 aa12.91□□□□□ -0.34
LSG1-203ENST00000437613 NLRP2Q9NX02 1062 aa12.91□□□□□ -0.34
LSG1-203ENST00000437613 KIF24Q5T7B8 1368 aa12.91□□□□□ -0.34
LSG1-203ENST00000437613 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.91□□□□□ -0.34
LSG1-203ENST00000437613 LMO7Q8WWI1 1683 aa12.9□□□□□ -0.34
LSG1-203ENST00000437613 BLMP54132 1417 aaPredicted RBP12.9□□□□□ -0.34
LSG1-203ENST00000437613 COL18A1P39060 1754 aa12.9□□□□□ -0.34
LSG1-203ENST00000437613 A0A0G2JS52 829 aa12.9□□□□□ -0.34
LSG1-203ENST00000437613 MYT1Q01538 1121 aa12.9□□□□□ -0.34
LSG1-203ENST00000437613 SEPT12Q8IYM1 358 aa12.9□□□□□ -0.34
LSG1-203ENST00000437613 THRAP3Q9Y2W1 955 aaKnown RBP12.9□□□□□ -0.34
LSG1-203ENST00000437613 RTL1A6NKG5 1358 aa12.9□□□□□ -0.34
LSG1-203ENST00000437613 ERBB3P21860 1342 aa12.89□□□□□ -0.35
LSG1-203ENST00000437613 CRB1P82279 1406 aa12.89□□□□□ -0.35
LSG1-203ENST00000437613 ABCC6O95255 1503 aa12.89□□□□□ -0.35
LSG1-203ENST00000437613 NRAPQ86VF7 1730 aa12.89□□□□□ -0.35
LSG1-203ENST00000437613 BARGINQ6ZT62 677 aa12.89□□□□□ -0.35
LSG1-203ENST00000437613 INSRP06213 1382 aa12.89□□□□□ -0.35
LSG1-203ENST00000437613 FLT4P35916 1363 aa12.89□□□□□ -0.35
LSG1-203ENST00000437613 LTN1O94822 1766 aa12.89□□□□□ -0.35
LSG1-203ENST00000437613 CDK12Q9NYV4 1490 aaPredicted RBP12.88□□□□□ -0.35
LSG1-203ENST00000437613 MTHFSP49914 203 aa12.87□□□□□ -0.35
LSG1-203ENST00000437613 GLI3P10071 1580 aa12.86□□□□□ -0.35
LSG1-203ENST00000437613 CDCA7Q9BWT1 371 aaPredicted RBP12.86□□□□□ -0.35
LSG1-203ENST00000437613 RGPD5Q99666 1765 aa12.86□□□□□ -0.35
LSG1-203ENST00000437613 RGS12O14924 1447 aa12.86□□□□□ -0.35
LSG1-203ENST00000437613 SMG6Q86US8 1419 aaKnown RBP12.86□□□□□ -0.35
LSG1-203ENST00000437613 ANKRD26Q9UPS8 1709 aa12.85□□□□□ -0.35
LSG1-203ENST00000437613 NBPF6Q5VWK0 638 aa12.85□□□□□ -0.35
LSG1-203ENST00000437613 NBPF4Q96M43 638 aa12.85□□□□□ -0.35
LSG1-203ENST00000437613 MAP2P11137 1827 aaKnown RBP12.85□□□□□ -0.35
LSG1-203ENST00000437613 PDE3BQ13370 1112 aa12.84□□□□□ -0.35
LSG1-203ENST00000437613 EIF4A2Q14240 407 aaKnown RBP12.84□□□□□ -0.35
LSG1-203ENST00000437613 KRT27Q7Z3Y8 459 aa12.84□□□□□ -0.35
LSG1-203ENST00000437613 IL2RBP14784 551 aa12.83□□□□□ -0.36
LSG1-203ENST00000437613 PPP2R1AP30153 589 aa12.83□□□□□ -0.36
LSG1-203ENST00000437613 RALBP1Q15311 655 aa12.83□□□□□ -0.36
LSG1-203ENST00000437613 DDB1Q16531 1140 aa12.83□□□□□ -0.36
LSG1-203ENST00000437613 PEAK1Q9H792 1746 aa12.82□□□□□ -0.36
LSG1-203ENST00000437613 EXOC5O00471 708 aa12.82□□□□□ -0.36
LSG1-203ENST00000437613 USHBP1Q8N6Y0 703 aa12.82□□□□□ -0.36
LSG1-203ENST00000437613 EYA1Q99502 592 aa12.82□□□□□ -0.36
LSG1-203ENST00000437613 CFAP53Q96M91 514 aa12.81□□□□□ -0.36
LSG1-203ENST00000437613 DIAPH1O60610 1272 aaKnown RBP12.8□□□□□ -0.36
LSG1-203ENST00000437613 IL13P35225 146 aa12.8□□□□□ -0.36
LSG1-203ENST00000437613 RAPGEF4Q8WZA2 1011 aa12.8□□□□□ -0.36
LSG1-203ENST00000437613 PARD3Q8TEW0 1356 aa12.8□□□□□ -0.36
LSG1-203ENST00000437613 SOCS7O14512 581 aa12.79□□□□□ -0.36
LSG1-203ENST00000437613 TATP17735 454 aaPredicted RBP12.79□□□□□ -0.36
LSG1-203ENST00000437613 FAM182BQ5T319 152 aa12.78□□□□□ -0.36
LSG1-203ENST00000437613 SULT6B1Q6IMI4 303 aa12.77□□□□□ -0.37
LSG1-203ENST00000437613 FAM196AQ6ZSG2 479 aa12.77□□□□□ -0.37
LSG1-203ENST00000437613 ZCRB1Q8TBF4 217 aaKnown RBP12.77□□□□□ -0.37
LSG1-203ENST00000437613 DDX54Q8TDD1 881 aaKnown RBP12.77□□□□□ -0.37
LSG1-203ENST00000437613 PRKRIP1Q9H875 184 aaPredicted RBP12.77□□□□□ -0.37
LSG1-203ENST00000437613 DISP2A7MBM2 1401 aa12.77□□□□□ -0.37
LSG1-203ENST00000437613 THSD7AQ9UPZ6 1657 aa12.77□□□□□ -0.37
LSG1-203ENST00000437613 U2SURPO15042 1029 aaKnown RBP12.76□□□□□ -0.37
LSG1-203ENST00000437613 MARCH10Q8NA82 808 aaPredicted RBP12.76□□□□□ -0.37
LSG1-203ENST00000437613 NUDCQ9Y266 331 aa12.76□□□□□ -0.37
LSG1-203ENST00000437613 IGSF1Q8N6C5 1336 aa12.76□□□□□ -0.37
LSG1-203ENST00000437613 FAM208AQ9UK61 1670 aaKnown RBP12.76□□□□□ -0.37
LSG1-203ENST00000437613 MYBBP1AQ9BQG0 1328 aaKnown RBP12.75□□□□□ -0.37
LSG1-203ENST00000437613 ANP32CO43423 234 aa12.74□□□□□ -0.37
LSG1-203ENST00000437613 HMOX1P09601 288 aa12.74□□□□□ -0.37
LSG1-203ENST00000437613 CCDC125Q86Z20 511 aa12.74□□□□□ -0.37
LSG1-203ENST00000437613 AEBP1Q8IUX7 1158 aa12.74□□□□□ -0.37
LSG1-203ENST00000437613 UPF1Q92900 1129 aaKnown RBP eCLIP12.74□□□□□ -0.37
LSG1-203ENST00000437613 SPG7Q9UQ90 795 aa12.74□□□□□ -0.37
LSG1-203ENST00000437613 BRWD3Q6RI45 1802 aa12.74□□□□□ -0.37
LSG1-203ENST00000437613 RGPD2P0DJD1 1756 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms