RNA–Protein interactions for RNA: ENST00000434407.6

HLA-F-220, Transcript of major histocompatibility complex, class I, F, humanhuman

BASIC

Gene HLA-F, Length 884 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-220ENST00000434407 SOX12O15370 315 aa25.38■■□□□ 1.65
HLA-F-220ENST00000434407 ONECUT3O60422 494 aaPredicted RBP25.38■■□□□ 1.65
HLA-F-220ENST00000434407 PANK3Q9H999 370 aa25.38■■□□□ 1.65
HLA-F-220ENST00000434407 GGNBP2Q9H3C7 697 aa25.37■■□□□ 1.65
HLA-F-220ENST00000434407 AXIN2Q9Y2T1 843 aa25.37■■□□□ 1.65
HLA-F-220ENST00000434407 CCDC7Q96M83 1385 aa25.36■■□□□ 1.65
HLA-F-220ENST00000434407 CGNL1Q0VF96 1302 aa25.35■■□□□ 1.65
HLA-F-220ENST00000434407 WASHC2AQ641Q2 1341 aa25.35■■□□□ 1.65
HLA-F-220ENST00000434407 STRN4Q9NRL3 753 aa25.34■■□□□ 1.65
HLA-F-220ENST00000434407 CCDC9Q9Y3X0 531 aaKnown RBP25.34■■□□□ 1.65
HLA-F-220ENST00000434407 SPATA31A1Q5TZJ5 1347 aa25.34■■□□□ 1.65
HLA-F-220ENST00000434407 ZBTB7CA1YPR0 619 aa25.33■■□□□ 1.65
HLA-F-220ENST00000434407 EVA1CP58658 441 aa25.33■■□□□ 1.65
HLA-F-220ENST00000434407 ANKRD26Q9UPS8 1709 aa25.32■■□□□ 1.64
HLA-F-220ENST00000434407 LARP1Q6PKG0 1096 aaKnown RBP25.32■■□□□ 1.64
HLA-F-220ENST00000434407 BRWD3Q6RI45 1802 aa25.3■■□□□ 1.64
HLA-F-220ENST00000434407 ZEB1P37275 1124 aaPredicted RBP25.29■■□□□ 1.64
HLA-F-220ENST00000434407 THSD7AQ9UPZ6 1657 aa25.29■■□□□ 1.64
HLA-F-220ENST00000434407 CRB1P82279 1406 aa25.29■■□□□ 1.64
HLA-F-220ENST00000434407 FBLN1P23142 703 aa25.28■■□□□ 1.64
HLA-F-220ENST00000434407 IP6K1Q92551 441 aa25.28■■□□□ 1.64
HLA-F-220ENST00000434407 MAP3K19Q56UN5 1328 aa25.28■■□□□ 1.64
HLA-F-220ENST00000434407 WDR17Q8IZU2 1322 aa25.28■■□□□ 1.64
HLA-F-220ENST00000434407 EP400Q96L91 3159 aa25.28■■□□□ 1.64
HLA-F-220ENST00000434407 FAM98CQ17RN3 349 aaKnown RBP25.27■■□□□ 1.64
HLA-F-220ENST00000434407 SEPT12Q8IYM1 358 aa25.27■■□□□ 1.64
HLA-F-220ENST00000434407 BARGINQ6ZT62 677 aa25.26■■□□□ 1.63
HLA-F-220ENST00000434407 NSD2O96028 1365 aa25.26■■□□□ 1.63
HLA-F-220ENST00000434407 BLMP54132 1417 aaPredicted RBP25.26■■□□□ 1.63
HLA-F-220ENST00000434407 PER1O15534 1290 aaPredicted RBP25.25■■□□□ 1.63
HLA-F-220ENST00000434407 THRAP3Q9Y2W1 955 aaKnown RBP25.25■■□□□ 1.63
HLA-F-220ENST00000434407 MAP2P11137 1827 aaKnown RBP25.25■■□□□ 1.63
HLA-F-220ENST00000434407 RTL1A6NKG5 1358 aa25.24■■□□□ 1.63
HLA-F-220ENST00000434407 ERBB3P21860 1342 aa25.24■■□□□ 1.63
HLA-F-220ENST00000434407 TCP11L2Q8N4U5 519 aa25.24■■□□□ 1.63
HLA-F-220ENST00000434407 KNSTRNQ9Y448 316 aa25.24■■□□□ 1.63
HLA-F-220ENST00000434407 RRS1Q15050 365 aaKnown RBP25.23■■□□□ 1.63
HLA-F-220ENST00000434407 KIF24Q5T7B8 1368 aa25.22■■□□□ 1.63
HLA-F-220ENST00000434407 HOXC9P31274 260 aa25.22■■□□□ 1.63
HLA-F-220ENST00000434407 AMER1Q5JTC6 1135 aaPredicted RBP25.22■■□□□ 1.63
HLA-F-220ENST00000434407 PEAK1Q9H792 1746 aa25.21■■□□□ 1.63
HLA-F-220ENST00000434407 TOM1L2Q6ZVM7 507 aa25.21■■□□□ 1.63
HLA-F-220ENST00000434407 CARD10Q9BWT7 1032 aa25.21■■□□□ 1.63
HLA-F-220ENST00000434407 USP35Q9P2H5 1018 aa25.21■■□□□ 1.63
HLA-F-220ENST00000434407 AMPHP49418 695 aa25.2■■□□□ 1.62
HLA-F-220ENST00000434407 WNK3Q9BYP7 1800 aa25.2■■□□□ 1.62
HLA-F-220ENST00000434407 ANKRD24Q8TF21 1146 aa25.19■■□□□ 1.62
HLA-F-220ENST00000434407 FAM208AQ9UK61 1670 aaKnown RBP25.19■■□□□ 1.62
HLA-F-220ENST00000434407 PARP4Q9UKK3 1724 aaKnown RBP25.18■■□□□ 1.62
HLA-F-220ENST00000434407 CSB-PGBD3P0DP91 1061 aa25.18■■□□□ 1.62
HLA-F-220ENST00000434407 FLT4P35916 1363 aa25.17■■□□□ 1.62
HLA-F-220ENST00000434407 KRT27Q7Z3Y8 459 aa25.16■■□□□ 1.62
HLA-F-220ENST00000434407 NPC1L1Q9UHC9 1359 aa25.16■■□□□ 1.62
HLA-F-220ENST00000434407 UPF1Q92900 1129 aaKnown RBP eCLIP25.15■■□□□ 1.62
HLA-F-220ENST00000434407 POLKQ9UBT6 870 aa25.15■■□□□ 1.62
HLA-F-220ENST00000434407 EMILIN1Q9Y6C2 1016 aa25.15■■□□□ 1.62
HLA-F-220ENST00000434407 INSRP06213 1382 aa25.15■■□□□ 1.62
HLA-F-220ENST00000434407 DISP2A7MBM2 1401 aa25.14■■□□□ 1.62
HLA-F-220ENST00000434407 RGPD2P0DJD1 1756 aa25.13■■□□□ 1.61
HLA-F-220ENST00000434407 A0A0G2JS52 829 aa25.13■■□□□ 1.61
HLA-F-220ENST00000434407 MYT1Q01538 1121 aa25.13■■□□□ 1.61
HLA-F-220ENST00000434407 HSP90AB2PQ58FF8 381 aa25.12■■□□□ 1.61
HLA-F-220ENST00000434407 MORC1Q86VD1 984 aa25.12■■□□□ 1.61
HLA-F-220ENST00000434407 CDCA7Q9BWT1 371 aaPredicted RBP25.12■■□□□ 1.61
HLA-F-220ENST00000434407 NLRP2Q9NX02 1062 aa25.12■■□□□ 1.61
HLA-F-220ENST00000434407 SMG6Q86US8 1419 aaKnown RBP25.11■■□□□ 1.61
HLA-F-220ENST00000434407 LRRC37A3O60309 1634 aa25.1■■□□□ 1.61
HLA-F-220ENST00000434407 TNNT2P45379 298 aaPredicted RBP25.09■■□□□ 1.61
HLA-F-220ENST00000434407 LTV1Q96GA3 475 aaPredicted RBP25.09■■□□□ 1.61
HLA-F-220ENST00000434407 PPM1GO15355 546 aaPredicted RBP25.04■■□□□ 1.6
HLA-F-220ENST00000434407 NBPF6Q5VWK0 638 aa25.04■■□□□ 1.6
HLA-F-220ENST00000434407 NBPF4Q96M43 638 aa25.04■■□□□ 1.6
HLA-F-220ENST00000434407 IL2RBP14784 551 aa25.03■■□□□ 1.6
HLA-F-220ENST00000434407 PDE3BQ13370 1112 aa25.03■■□□□ 1.6
HLA-F-220ENST00000434407 DDB1Q16531 1140 aa25.03■■□□□ 1.6
HLA-F-220ENST00000434407 CC2D1BQ5T0F9 858 aaKnown RBP25.03■■□□□ 1.6
HLA-F-220ENST00000434407 NCAPD2Q15021 1401 aa25.03■■□□□ 1.6
HLA-F-220ENST00000434407 CCDC125Q86Z20 511 aa25.02■■□□□ 1.6
HLA-F-220ENST00000434407 FAM182BQ5T319 152 aa25.01■■□□□ 1.59
HLA-F-220ENST00000434407 TNS2Q63HR2 1409 aa25.01■■□□□ 1.59
HLA-F-220ENST00000434407 FAM196AQ6ZSG2 479 aa25■■□□□ 1.59
HLA-F-220ENST00000434407 EXOC5O00471 708 aa24.99■■□□□ 1.59
HLA-F-220ENST00000434407 BCL9O00512 1426 aa24.97■■□□□ 1.59
HLA-F-220ENST00000434407 EIF4A2Q14240 407 aaKnown RBP24.97■■□□□ 1.59
HLA-F-220ENST00000434407 MARCH10Q8NA82 808 aaPredicted RBP24.97■■□□□ 1.59
HLA-F-220ENST00000434407 SBF2Q86WG5 1849 aa24.97■■□□□ 1.59
HLA-F-220ENST00000434407 MEGF6O75095 1541 aa24.96■■□□□ 1.59
HLA-F-220ENST00000434407 OVOS2A0A0G2JMS6 1433 aa24.95■■□□□ 1.59
HLA-F-220ENST00000434407 RGPD1P0DJD0 1748 aa24.95■■□□□ 1.59
HLA-F-220ENST00000434407 USHBP1Q8N6Y0 703 aa24.95■■□□□ 1.58
HLA-F-220ENST00000434407 EYA1Q99502 592 aa24.95■■□□□ 1.58
HLA-F-220ENST00000434407 MTHFSP49914 203 aa24.94■■□□□ 1.58
HLA-F-220ENST00000434407 SHANK3Q9BYB0 1731 aa24.93■■□□□ 1.58
HLA-F-220ENST00000434407 TNS1Q9HBL0 1735 aaKnown RBP24.93■■□□□ 1.58
HLA-F-220ENST00000434407 IGSF1Q8N6C5 1336 aa24.9■■□□□ 1.58
HLA-F-220ENST00000434407 DDX10Q13206 875 aaKnown RBP24.9■■□□□ 1.58
HLA-F-220ENST00000434407 KAT6BQ8WYB5 2073 aa24.89■■□□□ 1.58
HLA-F-220ENST00000434407 IL13P35225 146 aa24.89■■□□□ 1.58
HLA-F-220ENST00000434407 RAPGEF4Q8WZA2 1011 aa24.89■■□□□ 1.58
HLA-F-220ENST00000434407 ZCRB1Q8TBF4 217 aaKnown RBP24.88■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms