RNA–Protein interactions for RNA: ENST00000433382.5

TRAPPC12-207, Transcript of trafficking protein particle complex 12, humanhuman

TSL 5

Gene TRAPPC12, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-207ENST00000433382 ABCC6O95255 1503 aa17.35■□□□□ 0.37
TRAPPC12-207ENST00000433382 SLC24A1O60721 1099 aa17.34■□□□□ 0.37
TRAPPC12-207ENST00000433382 EIF4G2P78344 907 aaKnown RBP eCLIP17.34■□□□□ 0.372e-9■■■□□ 17.1
TRAPPC12-207ENST00000433382 LARP1Q6PKG0 1096 aaKnown RBP17.34■□□□□ 0.37
TRAPPC12-207ENST00000433382 TERF2IPQ9NYB0 399 aa17.34■□□□□ 0.37
TRAPPC12-207ENST00000433382 TNS1Q9HBL0 1735 aaKnown RBP17.33■□□□□ 0.37
TRAPPC12-207ENST00000433382 LRRC37A3O60309 1634 aa17.33■□□□□ 0.37
TRAPPC12-207ENST00000433382 FBLN1P23142 703 aa17.33■□□□□ 0.36
TRAPPC12-207ENST00000433382 SEPT12Q8IYM1 358 aa17.33■□□□□ 0.36
TRAPPC12-207ENST00000433382 FYB1O15117 783 aa17.32■□□□□ 0.36
TRAPPC12-207ENST00000433382 SOX12O15370 315 aa17.31■□□□□ 0.36
TRAPPC12-207ENST00000433382 FAM98CQ17RN3 349 aaKnown RBP17.31■□□□□ 0.36
TRAPPC12-207ENST00000433382 STRN4Q9NRL3 753 aa17.31■□□□□ 0.36
TRAPPC12-207ENST00000433382 FAM208AQ9UK61 1670 aaKnown RBP17.31■□□□□ 0.36
TRAPPC12-207ENST00000433382 SHANK3Q9BYB0 1731 aa17.3■□□□□ 0.36
TRAPPC12-207ENST00000433382 KCNH5Q8NCM2 988 aa17.29■□□□□ 0.36
TRAPPC12-207ENST00000433382 CCDC9Q9Y3X0 531 aaKnown RBP17.29■□□□□ 0.36
TRAPPC12-207ENST00000433382 CRB1P82279 1406 aa17.28■□□□□ 0.36
TRAPPC12-207ENST00000433382 NSD3Q9BZ95 1437 aa17.28■□□□□ 0.36
TRAPPC12-207ENST00000433382 CDCA8Q53HL2 280 aa17.27■□□□□ 0.36
TRAPPC12-207ENST00000433382 RGPD1P0DJD0 1748 aa17.27■□□□□ 0.35
TRAPPC12-207ENST00000433382 ZBTB7CA1YPR0 619 aa17.26■□□□□ 0.35
TRAPPC12-207ENST00000433382 BARGINQ6ZT62 677 aa17.26■□□□□ 0.35
TRAPPC12-207ENST00000433382 GGNBP2Q9H3C7 697 aa17.26■□□□□ 0.35
TRAPPC12-207ENST00000433382 DISP2A7MBM2 1401 aa17.26■□□□□ 0.35
TRAPPC12-207ENST00000433382 WDR17Q8IZU2 1322 aa17.25■□□□□ 0.35
TRAPPC12-207ENST00000433382 FAM182BQ5T319 152 aa17.25■□□□□ 0.35
TRAPPC12-207ENST00000433382 USP35Q9P2H5 1018 aa17.24■□□□□ 0.35
TRAPPC12-207ENST00000433382 KAT6BQ8WYB5 2073 aa17.24■□□□□ 0.35
TRAPPC12-207ENST00000433382 KIF7Q2M1P5 1343 aa17.23■□□□□ 0.35
TRAPPC12-207ENST00000433382 MAP3K19Q56UN5 1328 aa17.23■□□□□ 0.35
TRAPPC12-207ENST00000433382 EVA1CP58658 441 aa17.23■□□□□ 0.35
TRAPPC12-207ENST00000433382 KRT27Q7Z3Y8 459 aa17.22■□□□□ 0.35
TRAPPC12-207ENST00000433382 TCP11L2Q8N4U5 519 aa17.22■□□□□ 0.35
TRAPPC12-207ENST00000433382 ERBB3P21860 1342 aa17.21■□□□□ 0.35
TRAPPC12-207ENST00000433382 COG3Q96JB2 828 aa17.21■□□□□ 0.35
TRAPPC12-207ENST00000433382 PANK3Q9H999 370 aa17.2■□□□□ 0.34
TRAPPC12-207ENST00000433382 RRS1Q15050 365 aaKnown RBP17.19■□□□□ 0.34
TRAPPC12-207ENST00000433382 IP6K1Q92551 441 aa17.19■□□□□ 0.34
TRAPPC12-207ENST00000433382 POLR3GLQ9BT43 218 aa17.19■□□□□ 0.34
TRAPPC12-207ENST00000433382 THRAP3Q9Y2W1 955 aaKnown RBP17.19■□□□□ 0.34
TRAPPC12-207ENST00000433382 BLMP54132 1417 aaPredicted RBP17.19■□□□□ 0.34
TRAPPC12-207ENST00000433382 HOXC9P31274 260 aa17.18■□□□□ 0.34
TRAPPC12-207ENST00000433382 CARD10Q9BWT7 1032 aa17.18■□□□□ 0.34
TRAPPC12-207ENST00000433382 RREB1Q92766 1687 aa17.17■□□□□ 0.34
TRAPPC12-207ENST00000433382 TOM1L2Q6ZVM7 507 aa17.17■□□□□ 0.34
TRAPPC12-207ENST00000433382 WASHC2AQ641Q2 1341 aa17.17■□□□□ 0.34
TRAPPC12-207ENST00000433382 ANKRD24Q8TF21 1146 aa17.16■□□□□ 0.34
TRAPPC12-207ENST00000433382 CCDC7Q96M83 1385 aa17.15■□□□□ 0.34
TRAPPC12-207ENST00000433382 PER1O15534 1290 aaPredicted RBP17.15■□□□□ 0.34
TRAPPC12-207ENST00000433382 RTL1A6NKG5 1358 aa17.15■□□□□ 0.34
TRAPPC12-207ENST00000433382 EMILIN1Q9Y6C2 1016 aa17.14■□□□□ 0.33
TRAPPC12-207ENST00000433382 NUP188Q5SRE5 1749 aa17.13■□□□□ 0.33
TRAPPC12-207ENST00000433382 A0A0G2JS52 829 aa17.13■□□□□ 0.33
TRAPPC12-207ENST00000433382 MYT1Q01538 1121 aa17.13■□□□□ 0.33
TRAPPC12-207ENST00000433382 DEFB132Q7Z7B7 95 aa17.13■□□□□ 0.33
TRAPPC12-207ENST00000433382 PKD1L3Q7Z443 1732 aa17.13■□□□□ 0.33
TRAPPC12-207ENST00000433382 RGPD3A6NKT7 1758 aaPredicted RBP17.12■□□□□ 0.33
TRAPPC12-207ENST00000433382 RGPD4Q7Z3J3 1758 aa17.12■□□□□ 0.33
TRAPPC12-207ENST00000433382 HSP90AB2PQ58FF8 381 aa17.12■□□□□ 0.33
TRAPPC12-207ENST00000433382 MARCH10Q8NA82 808 aaPredicted RBP17.12■□□□□ 0.33
TRAPPC12-207ENST00000433382 NHSQ6T4R5 1651 aa17.12■□□□□ 0.33
TRAPPC12-207ENST00000433382 VIRMAQ69YN4 1812 aaKnown RBP17.12■□□□□ 0.33
TRAPPC12-207ENST00000433382 NCAPD2Q15021 1401 aa17.12■□□□□ 0.33
TRAPPC12-207ENST00000433382 AMER1Q5JTC6 1135 aaPredicted RBP17.11■□□□□ 0.33
TRAPPC12-207ENST00000433382 PTF1AQ7RTS3 328 aa17.11■□□□□ 0.33
TRAPPC12-207ENST00000433382 BTAF1O14981 1849 aa17.11■□□□□ 0.33
TRAPPC12-207ENST00000433382 CGNL1Q0VF96 1302 aa17.11■□□□□ 0.33
TRAPPC12-207ENST00000433382 TNS2Q63HR2 1409 aa17.11■□□□□ 0.33
TRAPPC12-207ENST00000433382 MEGF6O75095 1541 aa17.11■□□□□ 0.33
TRAPPC12-207ENST00000433382 ITGB4P16144 1822 aa17.1■□□□□ 0.33
TRAPPC12-207ENST00000433382 CSB-PGBD3P0DP91 1061 aa17.1■□□□□ 0.33
TRAPPC12-207ENST00000433382 CCDC125Q86Z20 511 aa17.1■□□□□ 0.33
TRAPPC12-207ENST00000433382 LTV1Q96GA3 475 aaPredicted RBP17.1■□□□□ 0.33
TRAPPC12-207ENST00000433382 POLKQ9UBT6 870 aa17.1■□□□□ 0.33
TRAPPC12-207ENST00000433382 INSRP06213 1382 aa17.1■□□□□ 0.33
TRAPPC12-207ENST00000433382 SMG6Q86US8 1419 aaKnown RBP17.1■□□□□ 0.33
TRAPPC12-207ENST00000433382 DOT1LQ8TEK3 1739 aa17.1■□□□□ 0.33
TRAPPC12-207ENST00000433382 NBPF6Q5VWK0 638 aa17.09■□□□□ 0.33
TRAPPC12-207ENST00000433382 NBPF4Q96M43 638 aa17.09■□□□□ 0.33
TRAPPC12-207ENST00000433382 FLT4P35916 1363 aa17.09■□□□□ 0.33
TRAPPC12-207ENST00000433382 KIF24Q5T7B8 1368 aa17.09■□□□□ 0.33
TRAPPC12-207ENST00000433382 BCL9O00512 1426 aa17.09■□□□□ 0.33
TRAPPC12-207ENST00000433382 TOGARAM1Q9Y4F4 1720 aa17.08■□□□□ 0.32
TRAPPC12-207ENST00000433382 AMPHP49418 695 aa17.08■□□□□ 0.32
TRAPPC12-207ENST00000433382 NLRP2Q9NX02 1062 aa17.08■□□□□ 0.32
TRAPPC12-207ENST00000433382 DDB1Q16531 1140 aa17.07■□□□□ 0.32
TRAPPC12-207ENST00000433382 OVOS2A0A0G2JMS6 1433 aa17.06■□□□□ 0.32
TRAPPC12-207ENST00000433382 NSD2O96028 1365 aa17.06■□□□□ 0.32
TRAPPC12-207ENST00000433382 TRIM37O94972 964 aa17.06■□□□□ 0.32
TRAPPC12-207ENST00000433382 FAM196AQ6ZSG2 479 aa17.06■□□□□ 0.32
TRAPPC12-207ENST00000433382 PDE3BQ13370 1112 aa17.05■□□□□ 0.32
TRAPPC12-207ENST00000433382 USHBP1Q8N6Y0 703 aa17.05■□□□□ 0.32
TRAPPC12-207ENST00000433382 CDCA7Q9BWT1 371 aaPredicted RBP17.05■□□□□ 0.32
TRAPPC12-207ENST00000433382 IL2RBP14784 551 aa17.04■□□□□ 0.32
TRAPPC12-207ENST00000433382 TNNT2P45379 298 aaPredicted RBP17.03■□□□□ 0.32
TRAPPC12-207ENST00000433382 EN1Q05925 392 aaPredicted RBP17.03■□□□□ 0.32
TRAPPC12-207ENST00000433382 CAMKK2Q96RR4 588 aa17.03■□□□□ 0.32
TRAPPC12-207ENST00000433382 LY75O60449 1722 aa17.03■□□□□ 0.32
TRAPPC12-207ENST00000433382 EXOC5O00471 708 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms