RNA–Protein interactions for RNA: ENST00000432725.1

SF1-208, Transcript of splicing factor 1, humanhuman

TSL 4

Gene SF1, Length 475 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-208ENST00000432725 CCDC7Q96M83 1385 aa21.69■■□□□ 1.06
SF1-208ENST00000432725 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.68■■□□□ 1.06
SF1-208ENST00000432725 AXIN2Q9Y2T1 843 aa21.68■■□□□ 1.06
SF1-208ENST00000432725 NINLQ9Y2I6 1382 aa21.68■■□□□ 1.06
SF1-208ENST00000432725 EDC4Q6P2E9 1401 aaKnown RBP21.68■■□□□ 1.06
SF1-208ENST00000432725 NFAT5O94916 1531 aa21.67■■□□□ 1.06
SF1-208ENST00000432725 A0A1W2PP64 1363 aa21.67■■□□□ 1.06
SF1-208ENST00000432725 WASHC2AQ641Q2 1341 aa21.67■■□□□ 1.06
SF1-208ENST00000432725 COL18A1P39060 1754 aa21.66■■□□□ 1.06
SF1-208ENST00000432725 DDX10Q13206 875 aaKnown RBP21.66■■□□□ 1.06
SF1-208ENST00000432725 NME9Q86XW9 330 aa21.66■■□□□ 1.06
SF1-208ENST00000432725 FAM196AQ6ZSG2 479 aa21.65■■□□□ 1.06
SF1-208ENST00000432725 WDR17Q8IZU2 1322 aa21.64■■□□□ 1.05
SF1-208ENST00000432725 SOX12O15370 315 aa21.64■■□□□ 1.05
SF1-208ENST00000432725 BAG6P46379 1132 aa21.64■■□□□ 1.05
SF1-208ENST00000432725 PDE3BQ13370 1112 aa21.64■■□□□ 1.05
SF1-208ENST00000432725 USP54Q70EL1 1684 aa21.63■■□□□ 1.05
SF1-208ENST00000432725 TOM1L2Q6ZVM7 507 aa21.63■■□□□ 1.05
SF1-208ENST00000432725 ABCC6O95255 1503 aa21.62■■□□□ 1.05
SF1-208ENST00000432725 TMF1P82094 1093 aa21.62■■□□□ 1.05
SF1-208ENST00000432725 DISP2A7MBM2 1401 aa21.61■■□□□ 1.05
SF1-208ENST00000432725 KIF7Q2M1P5 1343 aa21.6■■□□□ 1.05
SF1-208ENST00000432725 MIER1Q8N108 512 aa21.6■■□□□ 1.05
SF1-208ENST00000432725 OVOS2A0A0J9YW53 1432 aa21.59■■□□□ 1.05
SF1-208ENST00000432725 RGPD1P0DJD0 1748 aa21.59■■□□□ 1.05
SF1-208ENST00000432725 OVOS2Q6IE36 1432 aa21.59■■□□□ 1.05
SF1-208ENST00000432725 CARD10Q9BWT7 1032 aa21.59■■□□□ 1.05
SF1-208ENST00000432725 PARP4Q9UKK3 1724 aaKnown RBP21.58■■□□□ 1.05
SF1-208ENST00000432725 CDCA7Q9BWT1 371 aaPredicted RBP21.58■■□□□ 1.05
SF1-208ENST00000432725 C11orf95C9JLR9 678 aaPredicted RBP21.57■■□□□ 1.04
SF1-208ENST00000432725 TRIM37O94972 964 aa21.57■■□□□ 1.04
SF1-208ENST00000432725 EN1Q05925 392 aaPredicted RBP21.57■■□□□ 1.04
SF1-208ENST00000432725 ANKRD36BQ8N2N9 1353 aa21.57■■□□□ 1.04
SF1-208ENST00000432725 CSB-PGBD3P0DP91 1061 aa21.56■■□□□ 1.04
SF1-208ENST00000432725 CDCA8Q53HL2 280 aa21.56■■□□□ 1.04
SF1-208ENST00000432725 DDB1Q16531 1140 aa21.55■■□□□ 1.04
SF1-208ENST00000432725 TNS1Q9HBL0 1735 aaKnown RBP21.55■■□□□ 1.04
SF1-208ENST00000432725 ANP32CO43423 234 aa21.53■■□□□ 1.04
SF1-208ENST00000432725 CAMKK2Q96RR4 588 aa21.53■■□□□ 1.04
SF1-208ENST00000432725 ERBB3P21860 1342 aa21.53■■□□□ 1.04
SF1-208ENST00000432725 APBA3O96018 575 aa21.52■■□□□ 1.04
SF1-208ENST00000432725 COG3Q96JB2 828 aa21.52■■□□□ 1.04
SF1-208ENST00000432725 LRRC37A3O60309 1634 aa21.51■■□□□ 1.03
SF1-208ENST00000432725 PARD3Q8TEW0 1356 aa21.51■■□□□ 1.03
SF1-208ENST00000432725 EZH2Q15910 746 aaKnown RBP21.51■■□□□ 1.03
SF1-208ENST00000432725 OVOS2A0A0G2JMS6 1433 aa21.51■■□□□ 1.03
SF1-208ENST00000432725 RGPD5Q99666 1765 aa21.5■■□□□ 1.03
SF1-208ENST00000432725 PEAK1Q9H792 1746 aa21.49■■□□□ 1.03
SF1-208ENST00000432725 ANKRD24Q8TF21 1146 aa21.49■■□□□ 1.03
SF1-208ENST00000432725 IP6K1Q92551 441 aa21.49■■□□□ 1.03
SF1-208ENST00000432725 SRCAPQ6ZRS2 3230 aa21.49■■□□□ 1.03
SF1-208ENST00000432725 BCL9O00512 1426 aa21.48■■□□□ 1.03
SF1-208ENST00000432725 FYB1O15117 783 aa21.48■■□□□ 1.03
SF1-208ENST00000432725 MARCH10Q8NA82 808 aaPredicted RBP21.48■■□□□ 1.03
SF1-208ENST00000432725 CCER2I3L3R5 266 aa21.47■■□□□ 1.03
SF1-208ENST00000432725 EXOC5O00471 708 aa21.47■■□□□ 1.03
SF1-208ENST00000432725 NLRP2Q9NX02 1062 aa21.47■■□□□ 1.03
SF1-208ENST00000432725 WNK3Q9BYP7 1800 aa21.47■■□□□ 1.03
SF1-208ENST00000432725 LTN1O94822 1766 aa21.46■■□□□ 1.03
SF1-208ENST00000432725 MAP3K19Q56UN5 1328 aa21.45■■□□□ 1.02
SF1-208ENST00000432725 PSDA5PKW4 1024 aaPredicted RBP21.43■■□□□ 1.02
SF1-208ENST00000432725 BCL11BQ9C0K0 894 aaPredicted RBP21.43■■□□□ 1.02
SF1-208ENST00000432725 GGNBP2Q9H3C7 697 aa21.43■■□□□ 1.02
SF1-208ENST00000432725 TNS2Q63HR2 1409 aa21.43■■□□□ 1.02
SF1-208ENST00000432725 IL2RBP14784 551 aa21.42■■□□□ 1.02
SF1-208ENST00000432725 FBLN1P23142 703 aa21.42■■□□□ 1.02
SF1-208ENST00000432725 HOXC9P31274 260 aa21.42■■□□□ 1.02
SF1-208ENST00000432725 CARD14Q9BXL6 1004 aa21.42■■□□□ 1.02
SF1-208ENST00000432725 PLSCR1O15162 318 aa21.41■■□□□ 1.02
SF1-208ENST00000432725 AMPHP49418 695 aa21.4■■□□□ 1.02
SF1-208ENST00000432725 R3HDM1Q15032 1099 aaKnown RBP21.4■■□□□ 1.02
SF1-208ENST00000432725 RTL1A6NKG5 1358 aa21.39■■□□□ 1.02
SF1-208ENST00000432725 MYOM1P52179 1685 aa21.39■■□□□ 1.01
SF1-208ENST00000432725 PTF1AQ7RTS3 328 aa21.38■■□□□ 1.01
SF1-208ENST00000432725 RREB1Q92766 1687 aa21.37■■□□□ 1.01
SF1-208ENST00000432725 RRS1Q15050 365 aaKnown RBP21.37■■□□□ 1.01
SF1-208ENST00000432725 LTV1Q96GA3 475 aaPredicted RBP21.37■■□□□ 1.01
SF1-208ENST00000432725 NSD3Q9BZ95 1437 aa21.37■■□□□ 1.01
SF1-208ENST00000432725 SBF2Q86WG5 1849 aa21.35■■□□□ 1.01
SF1-208ENST00000432725 NBPF14Q5TI25 921 aa21.35■■□□□ 1.01
SF1-208ENST00000432725 KIF24Q5T7B8 1368 aa21.35■■□□□ 1.01
SF1-208ENST00000432725 FAM208AQ9UK61 1670 aaKnown RBP21.34■■□□□ 1.01
SF1-208ENST00000432725 LRP5O75197 1615 aa21.34■■□□□ 1.01
SF1-208ENST00000432725 POLR3GLQ9BT43 218 aa21.34■■□□□ 1.01
SF1-208ENST00000432725 RGPD3A6NKT7 1758 aaPredicted RBP21.33■■□□□ 1.01
SF1-208ENST00000432725 RGPD4Q7Z3J3 1758 aa21.33■■□□□ 1.01
SF1-208ENST00000432725 NUP188Q5SRE5 1749 aa21.33■■□□□ 1.01
SF1-208ENST00000432725 PRKRIP1Q9H875 184 aaPredicted RBP21.32■■□□□ 1
SF1-208ENST00000432725 KIF20BQ96Q89 1820 aa21.32■■□□□ 1
SF1-208ENST00000432725 KCNQ2O43526 872 aa21.31■■□□□ 1
SF1-208ENST00000432725 PROM2Q8N271 834 aa21.31■■□□□ 1
SF1-208ENST00000432725 INSRP06213 1382 aa21.31■■□□□ 1
SF1-208ENST00000432725 CGNL1Q0VF96 1302 aa21.3■■□□□ 1
SF1-208ENST00000432725 NBPF6Q5VWK0 638 aa21.3■■□□□ 1
SF1-208ENST00000432725 NBPF4Q96M43 638 aa21.3■■□□□ 1
SF1-208ENST00000432725 FLT4P35916 1363 aa21.3■■□□□ 1
SF1-208ENST00000432725 HSP90AB2PQ58FF8 381 aa21.29■■□□□ 1
SF1-208ENST00000432725 SMG6Q86US8 1419 aaKnown RBP21.29■■□□□ 1
SF1-208ENST00000432725 CENPBP07199 599 aaPredicted RBP21.27■■□□□ 1
SF1-208ENST00000432725 ACSBG1Q96GR2 724 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms