RNA–Protein interactions for RNA: ENST00000432289.5

CCDC196-204, Transcript of coiled-coil domain containing 196, humanhuman

TSL 3

Gene CCDC196, Length 541 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196-204ENST00000432289 IFT140Q96RY7 1462 aa11.42□□□□□ -0.58
CCDC196-204ENST00000432289 ARMC2Q8NEN0 867 aa11.41□□□□□ -0.58
CCDC196-204ENST00000432289 FAM174AQ8TBP5 190 aa11.41□□□□□ -0.58
CCDC196-204ENST00000432289 CDK15Q96Q40 435 aa11.41□□□□□ -0.58
CCDC196-204ENST00000432289 SENP2Q9HC62 589 aa11.41□□□□□ -0.58
CCDC196-204ENST00000432289 C4orf48Q5BLP8 95 aa11.4□□□□□ -0.58
CCDC196-204ENST00000432289 FBXO31Q5XUX0 539 aaPredicted RBP11.4□□□□□ -0.58
CCDC196-204ENST00000432289 CTDSPL2Q05D32 466 aa11.39□□□□□ -0.59
CCDC196-204ENST00000432289 LCE2AQ5TA79 106 aaPredicted RBP11.39□□□□□ -0.59
CCDC196-204ENST00000432289 PPP2R2DQ66LE6 453 aa11.39□□□□□ -0.59
CCDC196-204ENST00000432289 BPHLQ86WA6 291 aaPredicted RBP11.39□□□□□ -0.59
CCDC196-204ENST00000432289 PROCA1Q8NCQ7 364 aaPredicted RBP11.39□□□□□ -0.59
CCDC196-204ENST00000432289 GAPVD1Q14C86 1478 aa11.38□□□□□ -0.59
CCDC196-204ENST00000432289 CAPN5O15484 640 aaPredicted RBP11.38□□□□□ -0.59
CCDC196-204ENST00000432289 SNRPBP14678 240 aaKnown RBP11.38□□□□□ -0.59
CCDC196-204ENST00000432289 SH3RF1Q7Z6J0 888 aa11.38□□□□□ -0.59
CCDC196-204ENST00000432289 PRXQ9BXM0 1461 aa11.38□□□□□ -0.59
CCDC196-204ENST00000432289 ADH1CP00326 375 aa11.37□□□□□ -0.59
CCDC196-204ENST00000432289 NNTQ13423 1086 aa11.37□□□□□ -0.59
CCDC196-204ENST00000432289 UBTFP17480 764 aaKnown RBP11.36□□□□□ -0.59
CCDC196-204ENST00000432289 NBPF14Q5TI25 921 aa11.36□□□□□ -0.59
CCDC196-204ENST00000432289 TREML4Q6UXN2 200 aa11.36□□□□□ -0.59
CCDC196-204ENST00000432289 SH3BP5LQ7L8J4 393 aa11.36□□□□□ -0.59
CCDC196-204ENST00000432289 KIFC2Q96AC6 838 aa11.36□□□□□ -0.59
CCDC196-204ENST00000432289 C1QTNF2Q9BXJ5 285 aa11.36□□□□□ -0.59
CCDC196-204ENST00000432289 KLF16Q9BXK1 252 aaPredicted RBP11.36□□□□□ -0.59
CCDC196-204ENST00000432289 TRIM46Q7Z4K8 759 aa11.35□□□□□ -0.59
CCDC196-204ENST00000432289 IGF1RP08069 1367 aa11.35□□□□□ -0.59
CCDC196-204ENST00000432289 TNIKQ9UKE5 1360 aa11.35□□□□□ -0.59
CCDC196-204ENST00000432289 RAPGEF2Q9Y4G8 1499 aa11.35□□□□□ -0.59
CCDC196-204ENST00000432289 EIF4G3O43432 1585 aaKnown RBP11.35□□□□□ -0.59
CCDC196-204ENST00000432289 CTTNBP2Q8WZ74 1663 aa11.34□□□□□ -0.59
CCDC196-204ENST00000432289 TDRD9Q8NDG6 1382 aaKnown RBP11.34□□□□□ -0.59
CCDC196-204ENST00000432289 AGERQ15109 404 aa11.34□□□□□ -0.59
CCDC196-204ENST00000432289 GPKOWQ92917 476 aaPredicted RBP eCLIP11.34□□□□□ -0.59
CCDC196-204ENST00000432289 CARMIL1Q5VZK9 1371 aa11.33□□□□□ -0.6
CCDC196-204ENST00000432289 BMP1P13497 986 aa11.33□□□□□ -0.6
CCDC196-204ENST00000432289 GRM5P41594 1212 aa11.33□□□□□ -0.6
CCDC196-204ENST00000432289 TIMP2P16035 220 aa11.32□□□□□ -0.6
CCDC196-204ENST00000432289 LRRN4Q8WUT4 740 aa11.32□□□□□ -0.6
CCDC196-204ENST00000432289 GRIN2BQ13224 1484 aa11.32□□□□□ -0.6
CCDC196-204ENST00000432289 NR5A1Q13285 461 aa11.31□□□□□ -0.6
CCDC196-204ENST00000432289 TRMT44Q8IYL2 757 aaKnown RBP11.31□□□□□ -0.6
CCDC196-204ENST00000432289 GOPCQ9HD26 462 aa11.31□□□□□ -0.6
CCDC196-204ENST00000432289 WDR4P57081 412 aaKnown RBP11.3□□□□□ -0.6
CCDC196-204ENST00000432289 NFX1Q12986 1120 aaKnown RBP11.3□□□□□ -0.6
CCDC196-204ENST00000432289 ARID5BQ14865 1188 aa11.3□□□□□ -0.6
CCDC196-204ENST00000432289 MAP4K5Q9Y4K4 846 aa11.3□□□□□ -0.6
CCDC196-204ENST00000432289 ADAMTS12P58397 1594 aa11.29□□□□□ -0.6
CCDC196-204ENST00000432289 CEP162Q5TB80 1403 aa11.29□□□□□ -0.6
CCDC196-204ENST00000432289 NR3C2P08235 984 aa11.29□□□□□ -0.6
CCDC196-204ENST00000432289 AQRO60306 1485 aaKnown RBP eCLIP11.29□□□□□ -0.6
CCDC196-204ENST00000432289 ZNF608Q9ULD9 1512 aaPredicted RBP11.29□□□□□ -0.6
CCDC196-204ENST00000432289 PDXDC2PQ6P474 469 aa11.28□□□□□ -0.6
CCDC196-204ENST00000432289 WFS1O76024 890 aa11.27□□□□□ -0.61
CCDC196-204ENST00000432289 FKBPLQ9UIM3 349 aa11.27□□□□□ -0.61
CCDC196-204ENST00000432289 MAGEB6P1A0A0J9YX57 407 aa11.26□□□□□ -0.61
CCDC196-204ENST00000432289 AP1G2O75843 785 aa11.26□□□□□ -0.61
CCDC196-204ENST00000432289 MRPL14Q6P1L8 145 aaKnown RBP11.26□□□□□ -0.61
CCDC196-204ENST00000432289 ZFP42Q96MM3 310 aa11.26□□□□□ -0.61
CCDC196-204ENST00000432289 ZC3H4Q9UPT8 1303 aaKnown RBP11.26□□□□□ -0.61
CCDC196-204ENST00000432289 FHAD1B1AJZ9 1412 aa11.26□□□□□ -0.61
CCDC196-204ENST00000432289 NR6A1Q15406 480 aa11.25□□□□□ -0.61
CCDC196-204ENST00000432289 ERFEQ4G0M1 354 aa11.25□□□□□ -0.61
CCDC196-204ENST00000432289 ATP1B4Q9UN42 357 aaPredicted RBP11.25□□□□□ -0.61
CCDC196-204ENST00000432289 MAGI1Q96QZ7 1491 aaPredicted RBP11.25□□□□□ -0.61
CCDC196-204ENST00000432289 TERTO14746 1132 aaKnown RBP11.24□□□□□ -0.61
CCDC196-204ENST00000432289 ZIC2O95409 532 aaPredicted RBP11.24□□□□□ -0.61
CCDC196-204ENST00000432289 RFC5P40937 340 aa11.24□□□□□ -0.61
CCDC196-204ENST00000432289 ITPKCQ96DU7 683 aa11.24□□□□□ -0.61
CCDC196-204ENST00000432289 CLIP1P30622 1438 aa11.24□□□□□ -0.61
CCDC196-204ENST00000432289 NEUROD2Q15784 382 aa11.23□□□□□ -0.61
CCDC196-204ENST00000432289 CARD14Q9BXL6 1004 aa11.23□□□□□ -0.61
CCDC196-204ENST00000432289 ZFAND3Q9H8U3 227 aa11.23□□□□□ -0.61
CCDC196-204ENST00000432289 SNAPC4Q5SXM2 1469 aa11.23□□□□□ -0.61
CCDC196-204ENST00000432289 USP17L8P0C7I0 530 aa11.22□□□□□ -0.61
CCDC196-204ENST00000432289 FSHRP23945 695 aa11.22□□□□□ -0.61
CCDC196-204ENST00000432289 VASH1Q7L8A9 365 aaPredicted RBP11.22□□□□□ -0.61
CCDC196-204ENST00000432289 LCE2CQ5TA81 110 aa11.21□□□□□ -0.61
CCDC196-204ENST00000432289 ARHGAP9Q9BRR9 750 aa11.21□□□□□ -0.61
CCDC196-204ENST00000432289 HMX1Q9NP08 348 aaPredicted RBP11.21□□□□□ -0.61
CCDC196-204ENST00000432289 GPSM3Q9Y4H4 160 aa11.21□□□□□ -0.61
CCDC196-204ENST00000432289 BRPF1P55201 1214 aaPredicted RBP11.2□□□□□ -0.62
CCDC196-204ENST00000432289 SCARF1Q14162 830 aa11.2□□□□□ -0.62
CCDC196-204ENST00000432289 EPS8L1Q8TE68 723 aa11.2□□□□□ -0.62
CCDC196-204ENST00000432289 PCMTD1Q96MG8 357 aaPredicted RBP11.2□□□□□ -0.62
CCDC196-204ENST00000432289 OCSTAMPQ9BR26 566 aa11.2□□□□□ -0.62
CCDC196-204ENST00000432289 IL27Q8NEV9 243 aa11.19□□□□□ -0.62
CCDC196-204ENST00000432289 PURBQ96QR8 312 aaKnown RBP11.19□□□□□ -0.62
CCDC196-204ENST00000432289 SYNJ2O15056 1496 aa11.19□□□□□ -0.62
CCDC196-204ENST00000432289 CCDC116Q8IYX3 515 aa11.18□□□□□ -0.62
CCDC196-204ENST00000432289 MEIOBQ8N635 442 aa11.18□□□□□ -0.62
CCDC196-204ENST00000432289 NXF1Q9UBU9 619 aaKnown RBP11.18□□□□□ -0.62
CCDC196-204ENST00000432289 CDV3Q9UKY7 258 aaKnown RBP11.18□□□□□ -0.62
CCDC196-204ENST00000432289 EFCAB5A4FU69 1503 aa11.18□□□□□ -0.62
CCDC196-204ENST00000432289 CHD1O14646 1710 aa11.18□□□□□ -0.62
CCDC196-204ENST00000432289 IQGAP2Q13576 1575 aa11.17□□□□□ -0.62
CCDC196-204ENST00000432289 WIPF1O43516 503 aa11.17□□□□□ -0.62
CCDC196-204ENST00000432289 PTK2Q05397 1052 aa11.17□□□□□ -0.62
CCDC196-204ENST00000432289 NPAS3Q8IXF0 933 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms