RNA–Protein interactions for RNA: ENST00000432289.5

CCDC196-204, Transcript of coiled-coil domain containing 196, humanhuman

TSL 3

Gene CCDC196, Length 541 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196-204ENST00000432289 AEBP2Q6ZN18 517 aaPredicted RBP31.72■■■□□ 2.67
CCDC196-204ENST00000432289 CHIC1Q5VXU3 224 aa30.44■■■□□ 2.46
CCDC196-204ENST00000432289 SENP3Q9H4L4 574 aaPredicted RBP26.99■■□□□ 1.91
CCDC196-204ENST00000432289 PHF23Q9BUL5 403 aaPredicted RBP26.72■■□□□ 1.87
CCDC196-204ENST00000432289 FOXD1Q16676 465 aa25.11■■□□□ 1.61
CCDC196-204ENST00000432289 PLPPR3Q6T4P5 718 aa24.46■■□□□ 1.51
CCDC196-204ENST00000432289 PPP6R1Q9UPN7 881 aa23.75■■□□□ 1.39
CCDC196-204ENST00000432289 ADRA2BP18089 450 aa23.65■■□□□ 1.38
CCDC196-204ENST00000432289 PIAS4Q8N2W9 510 aaPredicted RBP23.51■■□□□ 1.35
CCDC196-204ENST00000432289 MSH5O43196 834 aa23.38■■□□□ 1.33
CCDC196-204ENST00000432289 POTEDQ86YR6 584 aa22.25■■□□□ 1.15
CCDC196-204ENST00000432289 SCAF1Q9H7N4 1312 aaKnown RBP21.65■■□□□ 1.06
CCDC196-204ENST00000432289 MAPK8IP2Q13387 824 aaPredicted RBP21.63■■□□□ 1.05
CCDC196-204ENST00000432289 DMRT2Q9Y5R5 561 aa21.47■■□□□ 1.03
CCDC196-204ENST00000432289 PPP4R3CPQ6ZMV5 832 aa21.46■■□□□ 1.03
CCDC196-204ENST00000432289 CNKSR2Q8WXI2 1034 aa21■□□□□ 0.95
CCDC196-204ENST00000432289 HOXD11P31277 338 aaPredicted RBP20.83■□□□□ 0.93
CCDC196-204ENST00000432289 RNF216Q9NWF9 866 aaPredicted RBP20.74■□□□□ 0.91
CCDC196-204ENST00000432289 NCBP3Q53F19 620 aaKnown RBP20.73■□□□□ 0.91
CCDC196-204ENST00000432289 DCAF8L1A6NGE4 600 aa20.46■□□□□ 0.87
CCDC196-204ENST00000432289 NPM3O75607 178 aaKnown RBP20.45■□□□□ 0.86
CCDC196-204ENST00000432289 KCNA4P22459 653 aa20.34■□□□□ 0.85
CCDC196-204ENST00000432289 DNAJC5BQ9UF47 199 aa20.1■□□□□ 0.81
CCDC196-204ENST00000432289 RNF39Q9H2S5 420 aa20■□□□□ 0.79
CCDC196-204ENST00000432289 CACNB1Q02641 598 aaPredicted RBP19.81■□□□□ 0.76
CCDC196-204ENST00000432289 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.77■□□□□ 0.76
CCDC196-204ENST00000432289 C1QBPQ07021 282 aaKnown RBP19.72■□□□□ 0.75
CCDC196-204ENST00000432289 SLC4A2P04920 1241 aa19.47■□□□□ 0.71
CCDC196-204ENST00000432289 U3KPZ7 1027 aaPredicted RBP19.44■□□□□ 0.7
CCDC196-204ENST00000432289 SLC4A1APQ9BWU0 796 aaKnown RBP19.25■□□□□ 0.67
CCDC196-204ENST00000432289 SPINK5Q9NQ38 1064 aaPredicted RBP19.03■□□□□ 0.64
CCDC196-204ENST00000432289 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19■□□□□ 0.63
CCDC196-204ENST00000432289 HNRNPUL2Q1KMD3 747 aaKnown RBP19■□□□□ 0.63
CCDC196-204ENST00000432289 CAPN15O75808 1086 aa18.94■□□□□ 0.62
CCDC196-204ENST00000432289 MYCNP04198 464 aaPredicted RBP18.9■□□□□ 0.62
CCDC196-204ENST00000432289 APLP2Q06481 763 aa18.9■□□□□ 0.62
CCDC196-204ENST00000432289 SAMD1Q6SPF0 538 aaPredicted RBP18.9■□□□□ 0.62
CCDC196-204ENST00000432289 FOXD4L1Q9NU39 408 aa18.89■□□□□ 0.61
CCDC196-204ENST00000432289 DSG3P32926 999 aa18.83■□□□□ 0.6
CCDC196-204ENST00000432289 ZNF219Q9P2Y4 722 aaPredicted RBP18.75■□□□□ 0.59
CCDC196-204ENST00000432289 ZBTB22O15209 634 aa18.73■□□□□ 0.59
CCDC196-204ENST00000432289 TRHP20396 242 aaPredicted RBP18.72■□□□□ 0.59
CCDC196-204ENST00000432289 ABCB7O75027 752 aa18.53■□□□□ 0.56
CCDC196-204ENST00000432289 ATF5Q9Y2D1 282 aaPredicted RBP18.44■□□□□ 0.54
CCDC196-204ENST00000432289 POLA2Q14181 598 aa18.33■□□□□ 0.52
CCDC196-204ENST00000432289 ATXN8OSP0DMR3 200 aa18.31■□□□□ 0.52
CCDC196-204ENST00000432289 CSRNP3Q8WYN3 585 aa18.17■□□□□ 0.5
CCDC196-204ENST00000432289 EHMT2Q96KQ7 1210 aa18.03■□□□□ 0.48
CCDC196-204ENST00000432289 ZBTB12Q9Y330 459 aaPredicted RBP18■□□□□ 0.47
CCDC196-204ENST00000432289 RBM42Q9BTD8 480 aaKnown RBP17.94■□□□□ 0.46
CCDC196-204ENST00000432289 OSCARQ8IYS5 282 aa17.73■□□□□ 0.43
CCDC196-204ENST00000432289 FBLN2P98095 1184 aa17.67■□□□□ 0.42
CCDC196-204ENST00000432289 MKRN4PQ13434 485 aaPredicted RBP17.63■□□□□ 0.41
CCDC196-204ENST00000432289 AKT1S1Q96B36 256 aa17.61■□□□□ 0.41
CCDC196-204ENST00000432289 POTEHQ6S545 545 aa17.49■□□□□ 0.39
CCDC196-204ENST00000432289 SPDYE2BA6NHP3 402 aa17.48■□□□□ 0.39
CCDC196-204ENST00000432289 SPDYE6P0CI01 402 aa17.48■□□□□ 0.39
CCDC196-204ENST00000432289 SPDYE2Q495Y8 402 aa17.48■□□□□ 0.39
CCDC196-204ENST00000432289 REM2Q8IYK8 340 aaPredicted RBP17.43■□□□□ 0.38
CCDC196-204ENST00000432289 CHRDL2Q6WN34 429 aa17.41■□□□□ 0.38
CCDC196-204ENST00000432289 SSUH2Q9Y2M2 353 aa17.31■□□□□ 0.36
CCDC196-204ENST00000432289 ZNF692Q9BU19 519 aaPredicted RBP17.29■□□□□ 0.36
CCDC196-204ENST00000432289 PITPNM1O00562 1244 aa17.23■□□□□ 0.35
CCDC196-204ENST00000432289 SPDYE1Q8NFV5 336 aaPredicted RBP17.08■□□□□ 0.32
CCDC196-204ENST00000432289 PIP4P2Q8N4L2 257 aa17.07■□□□□ 0.32
CCDC196-204ENST00000432289 FXR2P51116 673 aaKnown RBP eCLIP17.05■□□□□ 0.32
CCDC196-204ENST00000432289 PABPN1Q86U42 306 aaKnown RBP eCLIP17.05■□□□□ 0.32
CCDC196-204ENST00000432289 CLEC11AQ9Y240 323 aa16.97■□□□□ 0.31
CCDC196-204ENST00000432289 SPDYE4A6NLX3 237 aa16.93■□□□□ 0.3
CCDC196-204ENST00000432289 PRR29P0C7W0 189 aa16.78■□□□□ 0.28
CCDC196-204ENST00000432289 PRKAR2AP13861 404 aaKnown RBP16.77■□□□□ 0.28
CCDC196-204ENST00000432289 STAG3Q9UJ98 1225 aa16.67■□□□□ 0.26
CCDC196-204ENST00000432289 PROM2Q8N271 834 aa16.66■□□□□ 0.26
CCDC196-204ENST00000432289 CHADLQ6NUI6 762 aa16.64■□□□□ 0.25
CCDC196-204ENST00000432289 HAX1O00165 279 aa16.63■□□□□ 0.25
CCDC196-204ENST00000432289 SP7Q8TDD2 431 aaPredicted RBP16.56■□□□□ 0.24
CCDC196-204ENST00000432289 C19orf67A6NJJ6 358 aa16.49■□□□□ 0.23
CCDC196-204ENST00000432289 EVX2Q03828 476 aa16.49■□□□□ 0.23
CCDC196-204ENST00000432289 CREBZFQ9NS37 354 aa16.47■□□□□ 0.23
CCDC196-204ENST00000432289 FARP1Q9Y4F1 1045 aaPredicted RBP16.47■□□□□ 0.23
CCDC196-204ENST00000432289 FKBP8Q14318 412 aa16.4■□□□□ 0.22
CCDC196-204ENST00000432289 MNX1P50219 401 aaPredicted RBP16.27■□□□□ 0.2
CCDC196-204ENST00000432289 CD44P16070 742 aaKnown RBP16.26■□□□□ 0.19
CCDC196-204ENST00000432289 NISCHQ9Y2I1 1504 aa16.19■□□□□ 0.18
CCDC196-204ENST00000432289 NPM1P06748 294 aaKnown RBP eCLIP16.16■□□□□ 0.18
CCDC196-204ENST00000432289 GABBR2O75899 941 aa16.14■□□□□ 0.17
CCDC196-204ENST00000432289 MIER1Q8N108 512 aa16.09■□□□□ 0.17
CCDC196-204ENST00000432289 ZRANB1Q9UGI0 708 aa16.07■□□□□ 0.16
CCDC196-204ENST00000432289 ZNF579Q8NAF0 562 aaKnown RBP16.06■□□□□ 0.16
CCDC196-204ENST00000432289 CLCN6P51797 869 aa16.05■□□□□ 0.16
CCDC196-204ENST00000432289 PLEKHG5O94827 1062 aa16.03■□□□□ 0.16
CCDC196-204ENST00000432289 PAK3O75914 559 aaPredicted RBP16■□□□□ 0.15
CCDC196-204ENST00000432289 FBXO3Q9UK99 471 aa16■□□□□ 0.15
CCDC196-204ENST00000432289 PLCD3Q8N3E9 789 aa15.99■□□□□ 0.15
CCDC196-204ENST00000432289 ZBTB47Q9UFB7 747 aaPredicted RBP15.89■□□□□ 0.13
CCDC196-204ENST00000432289 PHF12Q96QT6 1004 aa15.88■□□□□ 0.13
CCDC196-204ENST00000432289 RASEFQ8IZ41 740 aa15.84■□□□□ 0.13
CCDC196-204ENST00000432289 TSPYL2Q9H2G4 693 aaPredicted RBP15.84■□□□□ 0.13
CCDC196-204ENST00000432289 CCDC61Q9Y6R9 512 aa15.83■□□□□ 0.12
CCDC196-204ENST00000432289 GALR2O43603 387 aaPredicted RBP15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms