RNA–Protein interactions for RNA: ENST00000431547.1

RFTN1-202, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 5

Gene RFTN1, Length 555 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-202ENST00000431547 ABCC6O95255 1503 aa25.11■■□□□ 1.61
RFTN1-202ENST00000431547 ATRNO75882 1429 aa25.11■■□□□ 1.61
RFTN1-202ENST00000431547 PLCH1Q4KWH8 1693 aa25.1■■□□□ 1.61
RFTN1-202ENST00000431547 TNNT2P45379 298 aaPredicted RBP25.1■■□□□ 1.61
RFTN1-202ENST00000431547 AMPHP49418 695 aa25.1■■□□□ 1.61
RFTN1-202ENST00000431547 KIF24Q5T7B8 1368 aa25.09■■□□□ 1.61
RFTN1-202ENST00000431547 STRN4Q9NRL3 753 aa25.08■■□□□ 1.61
RFTN1-202ENST00000431547 POLKQ9UBT6 870 aa25.08■■□□□ 1.61
RFTN1-202ENST00000431547 COL18A1P39060 1754 aa25.08■■□□□ 1.6
RFTN1-202ENST00000431547 RTL1A6NKG5 1358 aa25.07■■□□□ 1.6
RFTN1-202ENST00000431547 ANKRD26Q9UPS8 1709 aa25.07■■□□□ 1.6
RFTN1-202ENST00000431547 HOXC9P31274 260 aa25.07■■□□□ 1.6
RFTN1-202ENST00000431547 GJD4Q96KN9 370 aaPredicted RBP25.07■■□□□ 1.6
RFTN1-202ENST00000431547 EMILIN1Q9Y6C2 1016 aa25.07■■□□□ 1.6
RFTN1-202ENST00000431547 COL5A2P05997 1499 aaPredicted RBP25.07■■□□□ 1.6
RFTN1-202ENST00000431547 BLMP54132 1417 aaPredicted RBP25.06■■□□□ 1.6
RFTN1-202ENST00000431547 RXRBP28702 533 aa25.06■■□□□ 1.6
RFTN1-202ENST00000431547 RBM6P78332 1123 aaKnown RBP25.06■■□□□ 1.6
RFTN1-202ENST00000431547 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.06■■□□□ 1.6
RFTN1-202ENST00000431547 NRAPQ86VF7 1730 aa25.04■■□□□ 1.6
RFTN1-202ENST00000431547 CNGB1Q14028 1251 aaPredicted RBP25.04■■□□□ 1.6
RFTN1-202ENST00000431547 LARP1Q6PKG0 1096 aaKnown RBP25.04■■□□□ 1.6
RFTN1-202ENST00000431547 CCDC9Q9Y3X0 531 aaKnown RBP25.04■■□□□ 1.6
RFTN1-202ENST00000431547 SPATA31A5Q5VU36 1347 aa25.04■■□□□ 1.6
RFTN1-202ENST00000431547 SPATA31A7Q8IWB4 1347 aa25.04■■□□□ 1.6
RFTN1-202ENST00000431547 FLT4P35916 1363 aa25.04■■□□□ 1.6
RFTN1-202ENST00000431547 WDR17Q8IZU2 1322 aa25.03■■□□□ 1.6
RFTN1-202ENST00000431547 PPM1GO15355 546 aaPredicted RBP25.02■■□□□ 1.6
RFTN1-202ENST00000431547 ANKRD24Q8TF21 1146 aa25.02■■□□□ 1.6
RFTN1-202ENST00000431547 ERBB3P21860 1342 aa25.02■■□□□ 1.6
RFTN1-202ENST00000431547 LTN1O94822 1766 aa25.01■■□□□ 1.59
RFTN1-202ENST00000431547 HSP90AB2PQ58FF8 381 aa25.01■■□□□ 1.59
RFTN1-202ENST00000431547 SPATA31A1Q5TZJ5 1347 aa25.01■■□□□ 1.59
RFTN1-202ENST00000431547 INSRP06213 1382 aa25.01■■□□□ 1.59
RFTN1-202ENST00000431547 CSB-PGBD3P0DP91 1061 aa25■■□□□ 1.59
RFTN1-202ENST00000431547 CRB1P82279 1406 aa25■■□□□ 1.59
RFTN1-202ENST00000431547 TOM1L2Q6ZVM7 507 aa24.99■■□□□ 1.59
RFTN1-202ENST00000431547 SMG6Q86US8 1419 aaKnown RBP24.99■■□□□ 1.59
RFTN1-202ENST00000431547 ONECUT3O60422 494 aaPredicted RBP24.97■■□□□ 1.59
RFTN1-202ENST00000431547 LTV1Q96GA3 475 aaPredicted RBP24.97■■□□□ 1.59
RFTN1-202ENST00000431547 CARD10Q9BWT7 1032 aa24.97■■□□□ 1.59
RFTN1-202ENST00000431547 PEAK1Q9H792 1746 aa24.96■■□□□ 1.59
RFTN1-202ENST00000431547 MTHFSP49914 203 aa24.96■■□□□ 1.59
RFTN1-202ENST00000431547 THRAP3Q9Y2W1 955 aaKnown RBP24.96■■□□□ 1.59
RFTN1-202ENST00000431547 TCP11L2Q8N4U5 519 aa24.95■■□□□ 1.58
RFTN1-202ENST00000431547 USP35Q9P2H5 1018 aa24.95■■□□□ 1.58
RFTN1-202ENST00000431547 GLI3P10071 1580 aa24.95■■□□□ 1.58
RFTN1-202ENST00000431547 PARD3Q8TEW0 1356 aa24.94■■□□□ 1.58
RFTN1-202ENST00000431547 BARGINQ6ZT62 677 aa24.94■■□□□ 1.58
RFTN1-202ENST00000431547 NLRP2Q9NX02 1062 aa24.94■■□□□ 1.58
RFTN1-202ENST00000431547 CDK12Q9NYV4 1490 aaPredicted RBP24.94■■□□□ 1.58
RFTN1-202ENST00000431547 RALBP1Q15311 655 aa24.93■■□□□ 1.58
RFTN1-202ENST00000431547 PPP2R1AP30153 589 aa24.92■■□□□ 1.58
RFTN1-202ENST00000431547 FAM98CQ17RN3 349 aaKnown RBP24.92■■□□□ 1.58
RFTN1-202ENST00000431547 RGPD5Q99666 1765 aa24.91■■□□□ 1.58
RFTN1-202ENST00000431547 MAP2P11137 1827 aaKnown RBP24.91■■□□□ 1.58
RFTN1-202ENST00000431547 EIF4A2Q14240 407 aaKnown RBP24.89■■□□□ 1.58
RFTN1-202ENST00000431547 NBPF6Q5VWK0 638 aa24.89■■□□□ 1.58
RFTN1-202ENST00000431547 ILDR2Q71H61 639 aa24.89■■□□□ 1.58
RFTN1-202ENST00000431547 NBPF4Q96M43 638 aa24.89■■□□□ 1.58
RFTN1-202ENST00000431547 SEPT12Q8IYM1 358 aa24.88■■□□□ 1.57
RFTN1-202ENST00000431547 RGS12O14924 1447 aa24.87■■□□□ 1.57
RFTN1-202ENST00000431547 CDCA7Q9BWT1 371 aaPredicted RBP24.87■■□□□ 1.57
RFTN1-202ENST00000431547 PRKRIP1Q9H875 184 aaPredicted RBP24.86■■□□□ 1.57
RFTN1-202ENST00000431547 IL13P35225 146 aa24.84■■□□□ 1.57
RFTN1-202ENST00000431547 EYA1Q99502 592 aa24.84■■□□□ 1.57
RFTN1-202ENST00000431547 FAM208AQ9UK61 1670 aaKnown RBP24.83■■□□□ 1.57
RFTN1-202ENST00000431547 A0A0G2JS52 829 aa24.83■■□□□ 1.57
RFTN1-202ENST00000431547 MYT1Q01538 1121 aa24.83■■□□□ 1.57
RFTN1-202ENST00000431547 CFAP53Q96M91 514 aa24.83■■□□□ 1.57
RFTN1-202ENST00000431547 DISP2A7MBM2 1401 aa24.82■■□□□ 1.56
RFTN1-202ENST00000431547 DIAPH1O60610 1272 aaKnown RBP24.82■■□□□ 1.56
RFTN1-202ENST00000431547 IL2RBP14784 551 aa24.81■■□□□ 1.56
RFTN1-202ENST00000431547 MYBBP1AQ9BQG0 1328 aaKnown RBP24.81■■□□□ 1.56
RFTN1-202ENST00000431547 USHBP1Q8N6Y0 703 aa24.8■■□□□ 1.56
RFTN1-202ENST00000431547 IGSF1Q8N6C5 1336 aa24.8■■□□□ 1.56
RFTN1-202ENST00000431547 NCAPD2Q15021 1401 aa24.79■■□□□ 1.56
RFTN1-202ENST00000431547 THSD7AQ9UPZ6 1657 aa24.79■■□□□ 1.56
RFTN1-202ENST00000431547 COL3A1P02461 1466 aaPredicted RBP24.78■■□□□ 1.56
RFTN1-202ENST00000431547 KRT27Q7Z3Y8 459 aa24.77■■□□□ 1.56
RFTN1-202ENST00000431547 EXOC5O00471 708 aa24.76■■□□□ 1.55
RFTN1-202ENST00000431547 DDB1Q16531 1140 aa24.76■■□□□ 1.55
RFTN1-202ENST00000431547 RAPGEF4Q8WZA2 1011 aa24.76■■□□□ 1.55
RFTN1-202ENST00000431547 ANP32CO43423 234 aa24.75■■□□□ 1.55
RFTN1-202ENST00000431547 PDE3BQ13370 1112 aa24.75■■□□□ 1.55
RFTN1-202ENST00000431547 TATP17735 454 aaPredicted RBP24.73■■□□□ 1.55
RFTN1-202ENST00000431547 NUDCQ9Y266 331 aa24.73■■□□□ 1.55
RFTN1-202ENST00000431547 SULT6B1Q6IMI4 303 aa24.72■■□□□ 1.55
RFTN1-202ENST00000431547 MEGF6O75095 1541 aa24.71■■□□□ 1.55
RFTN1-202ENST00000431547 KDRP35968 1356 aa24.71■■□□□ 1.55
RFTN1-202ENST00000431547 RGPD2P0DJD1 1756 aa24.71■■□□□ 1.55
RFTN1-202ENST00000431547 PARP4Q9UKK3 1724 aaKnown RBP24.71■■□□□ 1.55
RFTN1-202ENST00000431547 OVOS2A0A0G2JMS6 1433 aa24.7■■□□□ 1.55
RFTN1-202ENST00000431547 U2SURPO15042 1029 aaKnown RBP24.7■■□□□ 1.54
RFTN1-202ENST00000431547 AEBP1Q8IUX7 1158 aa24.7■■□□□ 1.54
RFTN1-202ENST00000431547 ZCRB1Q8TBF4 217 aaKnown RBP24.7■■□□□ 1.54
RFTN1-202ENST00000431547 TNS2Q63HR2 1409 aa24.69■■□□□ 1.54
RFTN1-202ENST00000431547 PLEKHG2Q9H7P9 1386 aa24.68■■□□□ 1.54
RFTN1-202ENST00000431547 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.68■■□□□ 1.54
RFTN1-202ENST00000431547 RGPD1P0DJD0 1748 aa24.68■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms