RNA–Protein interactions for RNA: ENST00000430617.6

ATG4B-212, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 623 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-212ENST00000430617 TXNRD1Q16881 649 aa14.9□□□□□ -0.02
ATG4B-212ENST00000430617 COL18A1P39060 1754 aa14.9□□□□□ -0.02
ATG4B-212ENST00000430617 ARHGEF28Q8N1W1 1705 aaKnown RBP14.89□□□□□ -0.03
ATG4B-212ENST00000430617 CPDO75976 1380 aa14.88□□□□□ -0.03
ATG4B-212ENST00000430617 NHSQ6T4R5 1651 aa14.88□□□□□ -0.03
ATG4B-212ENST00000430617 BTAF1O14981 1849 aa14.88□□□□□ -0.03
ATG4B-212ENST00000430617 CRB1P82279 1406 aa14.88□□□□□ -0.03
ATG4B-212ENST00000430617 EIF3AQ14152 1382 aaKnown RBP14.87□□□□□ -0.03
ATG4B-212ENST00000430617 WASLO00401 505 aaPredicted RBP14.87□□□□□ -0.03
ATG4B-212ENST00000430617 MARCH10Q8NA82 808 aaPredicted RBP14.87□□□□□ -0.03
ATG4B-212ENST00000430617 DDB1Q16531 1140 aa14.86□□□□□ -0.03
ATG4B-212ENST00000430617 PELP1Q8IZL8 1130 aaKnown RBP14.86□□□□□ -0.03
ATG4B-212ENST00000430617 TRAK1Q9UPV9 953 aa14.86□□□□□ -0.03
ATG4B-212ENST00000430617 BCL9O00512 1426 aa14.84□□□□□ -0.03
ATG4B-212ENST00000430617 HSPA6P17066 643 aa14.84□□□□□ -0.03
ATG4B-212ENST00000430617 KLHL34Q8N239 644 aa14.83□□□□□ -0.04
ATG4B-212ENST00000430617 USP19O94966 1318 aa14.83□□□□□ -0.04
ATG4B-212ENST00000430617 AATKQ6ZMQ8 1374 aa14.83□□□□□ -0.04
ATG4B-212ENST00000430617 ATP10DQ9P241 1426 aa14.83□□□□□ -0.04
ATG4B-212ENST00000430617 NLGN2Q8NFZ4 835 aa14.82□□□□□ -0.04
ATG4B-212ENST00000430617 NUDT16Q96DE0 195 aaKnown RBP14.82□□□□□ -0.04
ATG4B-212ENST00000430617 POLR3AO14802 1390 aaPredicted RBP14.82□□□□□ -0.04
ATG4B-212ENST00000430617 YBX3P16989 372 aaKnown RBP eCLIP14.81□□□□□ -0.04
ATG4B-212ENST00000430617 ABTB2Q8N961 1025 aa14.81□□□□□ -0.04
ATG4B-212ENST00000430617 GCP02774 474 aa14.8□□□□□ -0.04
ATG4B-212ENST00000430617 ACEP12821 1306 aa14.8□□□□□ -0.04
ATG4B-212ENST00000430617 ZNF827Q17R98 1081 aa14.79□□□□□ -0.04
ATG4B-212ENST00000430617 ZBTB7CA1YPR0 619 aa14.77□□□□□ -0.05
ATG4B-212ENST00000430617 TOM1L2Q6ZVM7 507 aa14.77□□□□□ -0.05
ATG4B-212ENST00000430617 GPBP1L1Q9HC44 474 aaPredicted RBP14.76□□□□□ -0.05
ATG4B-212ENST00000430617 PCNTO95613 3336 aa14.76□□□□□ -0.05
ATG4B-212ENST00000430617 SLIT3O75094 1523 aa14.76□□□□□ -0.05
ATG4B-212ENST00000430617 PIK3C2AO00443 1686 aa14.75□□□□□ -0.05
ATG4B-212ENST00000430617 MPHOSPH9Q99550 1183 aa14.75□□□□□ -0.05
ATG4B-212ENST00000430617 AXIN2Q9Y2T1 843 aa14.75□□□□□ -0.05
ATG4B-212ENST00000430617 ADCY9O60503 1353 aa14.74□□□□□ -0.05
ATG4B-212ENST00000430617 RAB3GAP2Q9H2M9 1393 aa14.74□□□□□ -0.05
ATG4B-212ENST00000430617 NLRP13Q86W25 1043 aa14.74□□□□□ -0.05
ATG4B-212ENST00000430617 ZNF526Q8TF50 670 aaPredicted RBP14.74□□□□□ -0.05
ATG4B-212ENST00000430617 LRRC4BQ9NT99 713 aa14.74□□□□□ -0.05
ATG4B-212ENST00000430617 TRPM1Q7Z4N2 1603 aa14.74□□□□□ -0.05
ATG4B-212ENST00000430617 WDR17Q8IZU2 1322 aa14.73□□□□□ -0.05
ATG4B-212ENST00000430617 WDR90Q96KV7 1748 aa14.73□□□□□ -0.05
ATG4B-212ENST00000430617 ACSBG1Q96GR2 724 aa14.73□□□□□ -0.05
ATG4B-212ENST00000430617 CDK19Q9BWU1 502 aa14.73□□□□□ -0.05
ATG4B-212ENST00000430617 PLEKHG3A1L390 1219 aa14.72□□□□□ -0.05
ATG4B-212ENST00000430617 GRIN3BO60391 1043 aa14.72□□□□□ -0.05
ATG4B-212ENST00000430617 CAPN15O75808 1086 aa14.72□□□□□ -0.05
ATG4B-212ENST00000430617 LY75O60449 1722 aa14.72□□□□□ -0.05
ATG4B-212ENST00000430617 POLD1P28340 1107 aa14.71□□□□□ -0.05
ATG4B-212ENST00000430617 DNAJC5GQ8N7S2 189 aa14.71□□□□□ -0.05
ATG4B-212ENST00000430617 AKT1S1Q96B36 256 aa14.71□□□□□ -0.05
ATG4B-212ENST00000430617 CDCA7Q9BWT1 371 aaPredicted RBP14.71□□□□□ -0.05
ATG4B-212ENST00000430617 PNPLA7Q6ZV29 1317 aa14.7□□□□□ -0.06
ATG4B-212ENST00000430617 TNS2Q63HR2 1409 aa14.7□□□□□ -0.06
ATG4B-212ENST00000430617 COL13A1Q5TAT6 717 aaPredicted RBP14.7□□□□□ -0.06
ATG4B-212ENST00000430617 SLC16A10Q8TF71 515 aa14.7□□□□□ -0.06
ATG4B-212ENST00000430617 CCDC61Q9Y6R9 512 aa14.7□□□□□ -0.06
ATG4B-212ENST00000430617 ABCC6O95255 1503 aa14.7□□□□□ -0.06
ATG4B-212ENST00000430617 USP6P35125 1406 aa14.69□□□□□ -0.06
ATG4B-212ENST00000430617 EXOC5O00471 708 aa14.69□□□□□ -0.06
ATG4B-212ENST00000430617 QRICH2Q9H0J4 1663 aa14.68□□□□□ -0.06
ATG4B-212ENST00000430617 CARD10Q9BWT7 1032 aa14.67□□□□□ -0.06
ATG4B-212ENST00000430617 BRD4O60885 1362 aaPredicted RBP14.67□□□□□ -0.06
ATG4B-212ENST00000430617 CPSF1Q10570 1443 aaKnown RBP14.66□□□□□ -0.06
ATG4B-212ENST00000430617 KIF3CO14782 793 aa14.66□□□□□ -0.06
ATG4B-212ENST00000430617 NLRP6P59044 892 aa14.66□□□□□ -0.06
ATG4B-212ENST00000430617 PPIP5K1Q6PFW1 1433 aa14.66□□□□□ -0.06
ATG4B-212ENST00000430617 LTN1O94822 1766 aa14.65□□□□□ -0.06
ATG4B-212ENST00000430617 KCNQ4P56696 695 aa14.65□□□□□ -0.06
ATG4B-212ENST00000430617 DOT1LQ8TEK3 1739 aa14.64□□□□□ -0.07
ATG4B-212ENST00000430617 APLP1P51693 650 aa14.64□□□□□ -0.07
ATG4B-212ENST00000430617 KDM2AQ9Y2K7 1162 aa14.64□□□□□ -0.07
ATG4B-212ENST00000430617 TAF1LQ8IZX4 1826 aa14.63□□□□□ -0.07
ATG4B-212ENST00000430617 CSB-PGBD3P0DP91 1061 aa14.62□□□□□ -0.07
ATG4B-212ENST00000430617 ARHGEF25Q86VW2 580 aa14.62□□□□□ -0.07
ATG4B-212ENST00000430617 TFCP2L1Q9NZI6 479 aa14.62□□□□□ -0.07
ATG4B-212ENST00000430617 CCDC7Q96M83 1385 aa14.61□□□□□ -0.07
ATG4B-212ENST00000430617 PRELPP51888 382 aa14.61□□□□□ -0.07
ATG4B-212ENST00000430617 C5P01031 1676 aa14.61□□□□□ -0.07
ATG4B-212ENST00000430617 NFAT5O94916 1531 aa14.61□□□□□ -0.07
ATG4B-212ENST00000430617 DCAF11Q8TEB1 546 aa14.6□□□□□ -0.07
ATG4B-212ENST00000430617 USP54Q70EL1 1684 aa14.59□□□□□ -0.07
ATG4B-212ENST00000430617 KIAA1210Q9ULL0 1709 aa14.58□□□□□ -0.07
ATG4B-212ENST00000430617 SOX12O15370 315 aa14.58□□□□□ -0.08
ATG4B-212ENST00000430617 SLC27A3Q5K4L6 730 aa14.58□□□□□ -0.08
ATG4B-212ENST00000430617 MSL1Q68DK7 614 aa14.58□□□□□ -0.08
ATG4B-212ENST00000430617 TNS4Q8IZW8 715 aa14.58□□□□□ -0.08
ATG4B-212ENST00000430617 HTRA3P83110 453 aa14.57□□□□□ -0.08
ATG4B-212ENST00000430617 COL23A1Q86Y22 540 aaPredicted RBP14.57□□□□□ -0.08
ATG4B-212ENST00000430617 CABP2Q9NPB3 220 aa14.57□□□□□ -0.08
ATG4B-212ENST00000430617 WWC3Q9ULE0 1092 aa14.57□□□□□ -0.08
ATG4B-212ENST00000430617 RGPD2P0DJD1 1756 aa14.57□□□□□ -0.08
ATG4B-212ENST00000430617 SRPK2P78362 688 aaKnown RBP14.56□□□□□ -0.08
ATG4B-212ENST00000430617 CICQ96RK0 1608 aaPredicted RBP14.55□□□□□ -0.08
ATG4B-212ENST00000430617 N4BP2Q86UW6 1770 aaPredicted RBP14.55□□□□□ -0.08
ATG4B-212ENST00000430617 CABP1Q9NZU7 370 aa14.55□□□□□ -0.08
ATG4B-212ENST00000430617 CD2APQ9Y5K6 639 aa14.55□□□□□ -0.08
ATG4B-212ENST00000430617 KIAA1551Q9HCM1 1747 aa14.55□□□□□ -0.08
ATG4B-212ENST00000430617 TOGARAM1Q9Y4F4 1720 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms