RNA–Protein interactions for RNA: ENST00000429856.1

HMGB1P9-201, Transcript of high mobility group box 1 pseudogene 9, humanhuman

BASIC

Gene HMGB1P9, Length 646 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P9-201ENST00000429856 MAP4K5Q9Y4K4 846 aa6.43□□□□□ -1.38
HMGB1P9-201ENST00000429856 CFAP99D6REC4 459 aa6.42□□□□□ -1.38
HMGB1P9-201ENST00000429856 FSHRP23945 695 aa6.42□□□□□ -1.38
HMGB1P9-201ENST00000429856 RSBN1LQ6PCB5 846 aaPredicted RBP6.42□□□□□ -1.38
HMGB1P9-201ENST00000429856 PARP9Q8IXQ6 854 aa6.42□□□□□ -1.38
HMGB1P9-201ENST00000429856 CCDC116Q8IYX3 515 aa6.42□□□□□ -1.38
HMGB1P9-201ENST00000429856 VWA5B2Q8N398 1253 aa6.42□□□□□ -1.38
HMGB1P9-201ENST00000429856 BEGAINQ9BUH8 593 aa6.42□□□□□ -1.38
HMGB1P9-201ENST00000429856 TBC1D2Q9BYX2 928 aa6.42□□□□□ -1.38
HMGB1P9-201ENST00000429856 PGPEP1Q9NXJ5 209 aa6.42□□□□□ -1.38
HMGB1P9-201ENST00000429856 HRCP23327 699 aa6.41□□□□□ -1.38
HMGB1P9-201ENST00000429856 RNFT1Q5M7Z0 435 aa6.41□□□□□ -1.38
HMGB1P9-201ENST00000429856 PRPF38BQ5VTL8 546 aaKnown RBP6.41□□□□□ -1.38
HMGB1P9-201ENST00000429856 WHAMMQ8TF30 809 aa6.41□□□□□ -1.38
HMGB1P9-201ENST00000429856 PSMG3-AS1Q96PY0 264 aa6.41□□□□□ -1.38
HMGB1P9-201ENST00000429856 PCDHB15Q9Y5E8 787 aa6.41□□□□□ -1.38
HMGB1P9-201ENST00000429856 CDC14CA4D256 554 aa6.4□□□□□ -1.38
HMGB1P9-201ENST00000429856 SLC35F4A4IF30 521 aa6.4□□□□□ -1.38
HMGB1P9-201ENST00000429856 SPINT1O43278 529 aa6.4□□□□□ -1.38
HMGB1P9-201ENST00000429856 ITGA6P23229 1130 aa6.4□□□□□ -1.38
HMGB1P9-201ENST00000429856 MAP3K10Q02779 954 aa6.4□□□□□ -1.38
HMGB1P9-201ENST00000429856 NBPF14Q5TI25 921 aa6.4□□□□□ -1.38
HMGB1P9-201ENST00000429856 GIGYF2Q6Y7W6 1299 aaKnown RBP6.4□□□□□ -1.38
HMGB1P9-201ENST00000429856 TRMT44Q8IYL2 757 aaKnown RBP6.4□□□□□ -1.38
HMGB1P9-201ENST00000429856 C1QTNF2Q9BXJ5 285 aa6.4□□□□□ -1.38
HMGB1P9-201ENST00000429856 ENAMQ9NRM1 1142 aa6.4□□□□□ -1.38
HMGB1P9-201ENST00000429856 MAGEB6P1A0A0J9YX57 407 aa6.38□□□□□ -1.39
HMGB1P9-201ENST00000429856 Q6ZVU0 165 aa6.38□□□□□ -1.39
HMGB1P9-201ENST00000429856 RIC3Q7Z5B4 369 aa6.38□□□□□ -1.39
HMGB1P9-201ENST00000429856 SH3RF1Q7Z6J0 888 aa6.38□□□□□ -1.39
HMGB1P9-201ENST00000429856 TSC1Q92574 1164 aa6.38□□□□□ -1.39
HMGB1P9-201ENST00000429856 NUTM2BA6NNL0 878 aaPredicted RBP6.37□□□□□ -1.39
HMGB1P9-201ENST00000429856 NUTM2EB1AL46 878 aaPredicted RBP6.37□□□□□ -1.39
HMGB1P9-201ENST00000429856 MSTNO14793 375 aa6.37□□□□□ -1.39
HMGB1P9-201ENST00000429856 PER1O15534 1290 aaPredicted RBP6.37□□□□□ -1.39
HMGB1P9-201ENST00000429856 NEUROD2Q15784 382 aa6.37□□□□□ -1.39
HMGB1P9-201ENST00000429856 PPP1R26Q5T8A7 1209 aaPredicted RBP6.37□□□□□ -1.39
HMGB1P9-201ENST00000429856 NUTM2DQ5VT03 806 aaPredicted RBP6.37□□□□□ -1.39
HMGB1P9-201ENST00000429856 NUTM2AQ8IVF1 878 aaPredicted RBP6.37□□□□□ -1.39
HMGB1P9-201ENST00000429856 ADAMTS2O95450 1211 aa6.36□□□□□ -1.39
HMGB1P9-201ENST00000429856 SRSF11Q05519 484 aaKnown RBP6.36□□□□□ -1.39
HMGB1P9-201ENST00000429856 CBLBQ13191 982 aa6.36□□□□□ -1.39
HMGB1P9-201ENST00000429856 GPKOWQ92917 476 aaPredicted RBP eCLIP6.36□□□□□ -1.39
HMGB1P9-201ENST00000429856 KDM4CQ9H3R0 1056 aa6.36□□□□□ -1.39
HMGB1P9-201ENST00000429856 PHF20L1A8MW92 1017 aa6.35□□□□□ -1.39
HMGB1P9-201ENST00000429856 BRPF1P55201 1214 aaPredicted RBP6.35□□□□□ -1.39
HMGB1P9-201ENST00000429856 DHX9Q08211 1270 aaKnown RBP6.35□□□□□ -1.39
HMGB1P9-201ENST00000429856 SH3BP5LQ7L8J4 393 aa6.35□□□□□ -1.39
HMGB1P9-201ENST00000429856 BEND7Q8N7W2 519 aaPredicted RBP6.35□□□□□ -1.39
HMGB1P9-201ENST00000429856 CABLES1Q8TDN4 633 aa6.35□□□□□ -1.39
HMGB1P9-201ENST00000429856 DDRGK1Q96HY6 314 aa6.35□□□□□ -1.39
HMGB1P9-201ENST00000429856 GPBP1L1Q9HC44 474 aaPredicted RBP6.35□□□□□ -1.39
HMGB1P9-201ENST00000429856 ADAM23O75077 832 aa6.34□□□□□ -1.39
HMGB1P9-201ENST00000429856 CSPP1Q1MSJ5 1256 aa6.34□□□□□ -1.39
HMGB1P9-201ENST00000429856 LYPD4Q6UWN0 246 aa6.34□□□□□ -1.39
HMGB1P9-201ENST00000429856 CARD14Q9BXL6 1004 aa6.34□□□□□ -1.39
HMGB1P9-201ENST00000429856 CDV3Q9UKY7 258 aaKnown RBP6.34□□□□□ -1.39
HMGB1P9-201ENST00000429856 CELA2BP08218 269 aaPredicted RBP6.33□□□□□ -1.4
HMGB1P9-201ENST00000429856 HELBQ8NG08 1087 aaPredicted RBP6.33□□□□□ -1.4
HMGB1P9-201ENST00000429856 POLMQ9NP87 494 aaPredicted RBP6.33□□□□□ -1.4
HMGB1P9-201ENST00000429856 CTSOP43234 321 aaPredicted RBP6.32□□□□□ -1.4
HMGB1P9-201ENST00000429856 ERFEQ4G0M1 354 aa6.32□□□□□ -1.4
HMGB1P9-201ENST00000429856 KCTD15Q96SI1 283 aaPredicted RBP6.32□□□□□ -1.4
HMGB1P9-201ENST00000429856 INSM2Q96T92 566 aaPredicted RBP6.32□□□□□ -1.4
HMGB1P9-201ENST00000429856 RELBQ01201 579 aa6.31□□□□□ -1.4
HMGB1P9-201ENST00000429856 PLA2G4EQ3MJ16 856 aa6.31□□□□□ -1.4
HMGB1P9-201ENST00000429856 LCE3BQ5TA77 95 aa6.31□□□□□ -1.4
HMGB1P9-201ENST00000429856 FOXR1Q6PIV2 292 aa6.31□□□□□ -1.4
HMGB1P9-201ENST00000429856 PODNQ7Z5L7 613 aa6.31□□□□□ -1.4
HMGB1P9-201ENST00000429856 DCAF5Q96JK2 942 aa6.31□□□□□ -1.4
HMGB1P9-201ENST00000429856 AGBL1Q96MI9 1066 aa6.31□□□□□ -1.4
HMGB1P9-201ENST00000429856 KRTAP9-9Q9BYP9 154 aa6.31□□□□□ -1.4
HMGB1P9-201ENST00000429856 KRTAP9-4Q9BYQ2 154 aa6.31□□□□□ -1.4
HMGB1P9-201ENST00000429856 TUSC1Q2TAM9 212 aa6.3□□□□□ -1.4
HMGB1P9-201ENST00000429856 PDXDC2PQ6P474 469 aa6.3□□□□□ -1.4
HMGB1P9-201ENST00000429856 GALNT6Q8NCL4 622 aa6.3□□□□□ -1.4
HMGB1P9-201ENST00000429856 NEDD1Q8NHV4 660 aa6.3□□□□□ -1.4
HMGB1P9-201ENST00000429856 SLC10A4Q96EP9 437 aa6.3□□□□□ -1.4
HMGB1P9-201ENST00000429856 SPOCK3Q9BQ16 436 aa6.3□□□□□ -1.4
HMGB1P9-201ENST00000429856 ARHGAP9Q9BRR9 750 aa6.3□□□□□ -1.4
HMGB1P9-201ENST00000429856 RSPH6AQ9H0K4 717 aa6.3□□□□□ -1.4
HMGB1P9-201ENST00000429856 CNTNAP5Q8WYK1 1306 aa6.29□□□□□ -1.4
HMGB1P9-201ENST00000429856 ZBTB33Q86T24 672 aa6.29□□□□□ -1.4
HMGB1P9-201ENST00000429856 GMCL1Q96IK5 515 aa6.29□□□□□ -1.4
HMGB1P9-201ENST00000429856 FAM117AQ9C073 453 aa6.29□□□□□ -1.4
HMGB1P9-201ENST00000429856 ZNF395Q9H8N7 513 aaPredicted RBP6.29□□□□□ -1.4
HMGB1P9-201ENST00000429856 SENP3-EIF4A1A0A087X0R7 540 aa6.28□□□□□ -1.4
HMGB1P9-201ENST00000429856 LILRB3O75022 631 aa6.28□□□□□ -1.4
HMGB1P9-201ENST00000429856 RNF217Q8TC41 542 aa6.28□□□□□ -1.4
HMGB1P9-201ENST00000429856 QPCTQ16769 361 aa6.27□□□□□ -1.41
HMGB1P9-201ENST00000429856 SH3D19Q5HYK7 790 aa6.27□□□□□ -1.41
HMGB1P9-201ENST00000429856 TRIM52Q96A61 297 aa6.27□□□□□ -1.41
HMGB1P9-201ENST00000429856 BCRP11274 1271 aa6.26□□□□□ -1.41
HMGB1P9-201ENST00000429856 LYSMD3Q7Z3D4 306 aa6.26□□□□□ -1.41
HMGB1P9-201ENST00000429856 MBIPQ9NS73 344 aa6.26□□□□□ -1.41
HMGB1P9-201ENST00000429856 LIMD1Q9UGP4 676 aa6.26□□□□□ -1.41
HMGB1P9-201ENST00000429856 KRTAP4-8A0A0G2JLE6 195 aa6.25□□□□□ -1.41
HMGB1P9-201ENST00000429856 K7ELQ4 463 aaPredicted RBP6.25□□□□□ -1.41
HMGB1P9-201ENST00000429856 GAS6Q14393 721 aa6.25□□□□□ -1.41
HMGB1P9-201ENST00000429856 RTL5Q5HYW3 569 aaPredicted RBP6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms