RNA–Protein interactions for RNA: ENST00000428240.1

ITSN1-216, Transcript of intersectin 1, humanhuman

TSL 1 (best)

Gene ITSN1, Length 213 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-216ENST00000428240 SENP3-EIF4A1A0A087X0R7 540 aa11.98□□□□□ -0.49
ITSN1-216ENST00000428240 TOM1L2Q6ZVM7 507 aa11.98□□□□□ -0.49
ITSN1-216ENST00000428240 STAC3Q96MF2 364 aa11.98□□□□□ -0.49
ITSN1-216ENST00000428240 AXIN2Q9Y2T1 843 aa11.98□□□□□ -0.49
ITSN1-216ENST00000428240 TXNRD1Q16881 649 aa11.97□□□□□ -0.49
ITSN1-216ENST00000428240 NLRP6P59044 892 aa11.96□□□□□ -0.49
ITSN1-216ENST00000428240 C1QTNF8P60827 252 aa11.96□□□□□ -0.49
ITSN1-216ENST00000428240 SRPK2P78362 688 aaKnown RBP11.96□□□□□ -0.49
ITSN1-216ENST00000428240 SLC15A2Q16348 729 aa11.96□□□□□ -0.49
ITSN1-216ENST00000428240 SGIP1Q9BQI5 828 aa11.96□□□□□ -0.49
ITSN1-216ENST00000428240 CABP2Q9NPB3 220 aa11.96□□□□□ -0.49
ITSN1-216ENST00000428240 STK32BQ9NY57 414 aa11.96□□□□□ -0.49
ITSN1-216ENST00000428240 BCL9O00512 1426 aa11.95□□□□□ -0.5
ITSN1-216ENST00000428240 MTFR1LQ9H019 292 aa11.95□□□□□ -0.5
ITSN1-216ENST00000428240 SLIT3O75094 1523 aa11.95□□□□□ -0.5
ITSN1-216ENST00000428240 WDR17Q8IZU2 1322 aa11.94□□□□□ -0.5
ITSN1-216ENST00000428240 NBPF1Q3BBV0 1214 aa11.94□□□□□ -0.5
ITSN1-216ENST00000428240 CABP1Q9NZU7 370 aa11.94□□□□□ -0.5
ITSN1-216ENST00000428240 USP6P35125 1406 aa11.94□□□□□ -0.5
ITSN1-216ENST00000428240 COL18A1P39060 1754 aa11.93□□□□□ -0.5
ITSN1-216ENST00000428240 BRD4O60885 1362 aaPredicted RBP11.92□□□□□ -0.5
ITSN1-216ENST00000428240 CDCA7Q9BWT1 371 aaPredicted RBP11.92□□□□□ -0.5
ITSN1-216ENST00000428240 GOLGB1Q14789 3259 aaKnown RBP11.92□□□□□ -0.5
ITSN1-216ENST00000428240 WNK3Q9BYP7 1800 aa11.91□□□□□ -0.5
ITSN1-216ENST00000428240 EXOC5O00471 708 aa11.91□□□□□ -0.5
ITSN1-216ENST00000428240 ARHGEF25Q86VW2 580 aa11.91□□□□□ -0.5
ITSN1-216ENST00000428240 ARXQ96QS3 562 aa11.91□□□□□ -0.5
ITSN1-216ENST00000428240 CARD10Q9BWT7 1032 aa11.91□□□□□ -0.5
ITSN1-216ENST00000428240 CPSF1Q10570 1443 aaKnown RBP11.91□□□□□ -0.5
ITSN1-216ENST00000428240 PIK3C2AO00443 1686 aa11.91□□□□□ -0.5
ITSN1-216ENST00000428240 CENPJQ9HC77 1338 aaPredicted RBP11.9□□□□□ -0.5
ITSN1-216ENST00000428240 SOX12O15370 315 aa11.9□□□□□ -0.5
ITSN1-216ENST00000428240 CSB-PGBD3P0DP91 1061 aa11.9□□□□□ -0.5
ITSN1-216ENST00000428240 ACSBG1Q96GR2 724 aa11.9□□□□□ -0.5
ITSN1-216ENST00000428240 AKAP12Q02952 1782 aa11.9□□□□□ -0.51
ITSN1-216ENST00000428240 IFFO2Q5TF58 517 aa11.89□□□□□ -0.51
ITSN1-216ENST00000428240 TNS2Q63HR2 1409 aa11.88□□□□□ -0.51
ITSN1-216ENST00000428240 ZNF827Q17R98 1081 aa11.88□□□□□ -0.51
ITSN1-216ENST00000428240 MAP3K5Q99683 1374 aa11.88□□□□□ -0.51
ITSN1-216ENST00000428240 PAPPAQ13219 1627 aa11.87□□□□□ -0.51
ITSN1-216ENST00000428240 KIAA1210Q9ULL0 1709 aa11.87□□□□□ -0.51
ITSN1-216ENST00000428240 GPR162Q16538 588 aa11.87□□□□□ -0.51
ITSN1-216ENST00000428240 LRRC4BQ9NT99 713 aa11.87□□□□□ -0.51
ITSN1-216ENST00000428240 TTC21BQ7Z4L5 1316 aa11.86□□□□□ -0.51
ITSN1-216ENST00000428240 KCNH5Q8NCM2 988 aa11.86□□□□□ -0.51
ITSN1-216ENST00000428240 CCDC7Q96M83 1385 aa11.86□□□□□ -0.51
ITSN1-216ENST00000428240 NHSQ6T4R5 1651 aa11.86□□□□□ -0.51
ITSN1-216ENST00000428240 RGPD5Q99666 1765 aa11.86□□□□□ -0.51
ITSN1-216ENST00000428240 CHD4Q14839 1912 aa11.86□□□□□ -0.51
ITSN1-216ENST00000428240 TRPM1Q7Z4N2 1603 aa11.86□□□□□ -0.51
ITSN1-216ENST00000428240 CEP350Q5VT06 3117 aa11.85□□□□□ -0.51
ITSN1-216ENST00000428240 GIGYF1O75420 1035 aaPredicted RBP11.85□□□□□ -0.51
ITSN1-216ENST00000428240 QRICH2Q9H0J4 1663 aa11.84□□□□□ -0.51
ITSN1-216ENST00000428240 KLHL34Q8N239 644 aa11.84□□□□□ -0.51
ITSN1-216ENST00000428240 NFAT5O94916 1531 aa11.84□□□□□ -0.51
ITSN1-216ENST00000428240 PELP1Q8IZL8 1130 aaKnown RBP11.83□□□□□ -0.52
ITSN1-216ENST00000428240 AKT1S1Q96B36 256 aa11.83□□□□□ -0.52
ITSN1-216ENST00000428240 ZNF692Q9BU19 519 aaPredicted RBP11.83□□□□□ -0.52
ITSN1-216ENST00000428240 ABCC6O95255 1503 aa11.82□□□□□ -0.52
ITSN1-216ENST00000428240 NLGN2Q8NFZ4 835 aa11.82□□□□□ -0.52
ITSN1-216ENST00000428240 ERBB3P21860 1342 aa11.82□□□□□ -0.52
ITSN1-216ENST00000428240 EVC2Q86UK5 1308 aa11.82□□□□□ -0.52
ITSN1-216ENST00000428240 TTC21AQ8NDW8 1320 aa11.82□□□□□ -0.52
ITSN1-216ENST00000428240 SHANK3Q9BYB0 1731 aa11.81□□□□□ -0.52
ITSN1-216ENST00000428240 IL2RBP14784 551 aa11.81□□□□□ -0.52
ITSN1-216ENST00000428240 NLRP2Q9NX02 1062 aa11.81□□□□□ -0.52
ITSN1-216ENST00000428240 PNPLA7Q6ZV29 1317 aa11.81□□□□□ -0.52
ITSN1-216ENST00000428240 BTAF1O14981 1849 aa11.81□□□□□ -0.52
ITSN1-216ENST00000428240 POLD1P28340 1107 aa11.8□□□□□ -0.52
ITSN1-216ENST00000428240 KCNQ4P56696 695 aa11.8□□□□□ -0.52
ITSN1-216ENST00000428240 SLC16A10Q8TF71 515 aa11.8□□□□□ -0.52
ITSN1-216ENST00000428240 KTN1Q86UP2 1357 aaKnown RBP11.79□□□□□ -0.52
ITSN1-216ENST00000428240 YBX3P16989 372 aaKnown RBP eCLIP11.79□□□□□ -0.52
ITSN1-216ENST00000428240 SLC27A3Q5K4L6 730 aa11.78□□□□□ -0.52
ITSN1-216ENST00000428240 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.78□□□□□ -0.52
ITSN1-216ENST00000428240 ANKRD24Q8TF21 1146 aa11.78□□□□□ -0.52
ITSN1-216ENST00000428240 DDX54Q8TDD1 881 aaKnown RBP11.77□□□□□ -0.53
ITSN1-216ENST00000428240 TFCP2L1Q9NZI6 479 aa11.77□□□□□ -0.53
ITSN1-216ENST00000428240 COL24A1Q17RW2 1714 aa11.77□□□□□ -0.53
ITSN1-216ENST00000428240 NME9Q86XW9 330 aa11.76□□□□□ -0.53
ITSN1-216ENST00000428240 USP31Q70CQ4 1352 aa11.76□□□□□ -0.53
ITSN1-216ENST00000428240 L3MBTL2Q969R5 705 aa11.75□□□□□ -0.53
ITSN1-216ENST00000428240 SYTL4Q96C24 671 aaPredicted RBP11.75□□□□□ -0.53
ITSN1-216ENST00000428240 QSER1Q2KHR3 1735 aa11.74□□□□□ -0.53
ITSN1-216ENST00000428240 GRIN3BO60391 1043 aa11.74□□□□□ -0.53
ITSN1-216ENST00000428240 PRIM1P49642 420 aaKnown RBP11.74□□□□□ -0.53
ITSN1-216ENST00000428240 ATP10DQ9P241 1426 aa11.74□□□□□ -0.53
ITSN1-216ENST00000428240 TUBGCP6Q96RT7 1819 aa11.74□□□□□ -0.53
ITSN1-216ENST00000428240 NSD2O96028 1365 aa11.73□□□□□ -0.53
ITSN1-216ENST00000428240 MON2Q7Z3U7 1717 aa11.73□□□□□ -0.53
ITSN1-216ENST00000428240 COL23A1Q86Y22 540 aaPredicted RBP11.73□□□□□ -0.53
ITSN1-216ENST00000428240 CD163L1Q9NR16 1453 aa11.73□□□□□ -0.53
ITSN1-216ENST00000428240 SBNO2Q9Y2G9 1366 aa11.73□□□□□ -0.53
ITSN1-216ENST00000428240 ANKRD36BQ8N2N9 1353 aa11.72□□□□□ -0.53
ITSN1-216ENST00000428240 MSH5O43196 834 aa11.72□□□□□ -0.53
ITSN1-216ENST00000428240 MSL1Q68DK7 614 aa11.72□□□□□ -0.53
ITSN1-216ENST00000428240 LTN1O94822 1766 aa11.72□□□□□ -0.53
ITSN1-216ENST00000428240 USP54Q70EL1 1684 aa11.71□□□□□ -0.53
ITSN1-216ENST00000428240 ROCK2O75116 1388 aaKnown RBP11.71□□□□□ -0.53
ITSN1-216ENST00000428240 LTV1Q96GA3 475 aaPredicted RBP11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms